RNA–Protein interactions for RNA: ENST00000416603.1

THUMPD3-202, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-202ENST00000416603 MAP2P11137 1827 aaKnown RBP9.19□□□□□ -0.94
THUMPD3-202ENST00000416603 SPINT1O43278 529 aa9.18□□□□□ -0.94
THUMPD3-202ENST00000416603 TATP17735 454 aaPredicted RBP9.18□□□□□ -0.94
THUMPD3-202ENST00000416603 EIF4G2P78344 907 aaKnown RBP eCLIP9.18□□□□□ -0.94
THUMPD3-202ENST00000416603 GPR162Q16538 588 aa9.18□□□□□ -0.94
THUMPD3-202ENST00000416603 SLC16A10Q8TF71 515 aa9.18□□□□□ -0.94
THUMPD3-202ENST00000416603 CCNL1Q9UK58 526 aaPredicted RBP9.18□□□□□ -0.94
THUMPD3-202ENST00000416603 COG6Q9Y2V7 657 aa9.18□□□□□ -0.94
THUMPD3-202ENST00000416603 ANKRD26Q9UPS8 1709 aa9.17□□□□□ -0.94
THUMPD3-202ENST00000416603 FLT4P35916 1363 aa9.17□□□□□ -0.94
THUMPD3-202ENST00000416603 TERTO14746 1132 aaKnown RBP9.17□□□□□ -0.94
THUMPD3-202ENST00000416603 WFS1O76024 890 aa9.17□□□□□ -0.94
THUMPD3-202ENST00000416603 ADD1P35611 737 aaKnown RBP9.17□□□□□ -0.94
THUMPD3-202ENST00000416603 NFX1Q12986 1120 aaKnown RBP9.17□□□□□ -0.94
THUMPD3-202ENST00000416603 NBPF6Q5VWK0 638 aa9.17□□□□□ -0.94
THUMPD3-202ENST00000416603 TREML4Q6UXN2 200 aa9.17□□□□□ -0.94
THUMPD3-202ENST00000416603 NBPF4Q96M43 638 aa9.17□□□□□ -0.94
THUMPD3-202ENST00000416603 NXF1Q9UBU9 619 aaKnown RBP9.17□□□□□ -0.94
THUMPD3-202ENST00000416603 NSD3Q9BZ95 1437 aa9.16□□□□□ -0.94
THUMPD3-202ENST00000416603 CGNL1Q0VF96 1302 aa9.16□□□□□ -0.94
THUMPD3-202ENST00000416603 PCDH11XQ9BZA7 1347 aa9.16□□□□□ -0.94
THUMPD3-202ENST00000416603 PCDH11YQ9BZA8 1340 aa9.16□□□□□ -0.94
THUMPD3-202ENST00000416603 TTLL8A6PVC2 850 aa9.16□□□□□ -0.94
THUMPD3-202ENST00000416603 FYB1O15117 783 aa9.16□□□□□ -0.94
THUMPD3-202ENST00000416603 FLIIQ13045 1269 aa9.16□□□□□ -0.94
THUMPD3-202ENST00000416603 DNMT3LQ9UJW3 386 aa9.16□□□□□ -0.94
THUMPD3-202ENST00000416603 PCDHB11Q9Y5F2 797 aa9.16□□□□□ -0.94
THUMPD3-202ENST00000416603 C4BP0C0L5 1744 aa9.16□□□□□ -0.94
THUMPD3-202ENST00000416603 UBR3Q6ZT12 1888 aa9.15□□□□□ -0.94
THUMPD3-202ENST00000416603 INSRP06213 1382 aa9.15□□□□□ -0.94
THUMPD3-202ENST00000416603 ZEB1P37275 1124 aaPredicted RBP9.15□□□□□ -0.94
THUMPD3-202ENST00000416603 WASHC4Q2M389 1173 aa9.15□□□□□ -0.94
THUMPD3-202ENST00000416603 CDCA8Q53HL2 280 aa9.15□□□□□ -0.94
THUMPD3-202ENST00000416603 HSP90AB2PQ58FF8 381 aa9.15□□□□□ -0.94
THUMPD3-202ENST00000416603 MSL1Q68DK7 614 aa9.15□□□□□ -0.94
THUMPD3-202ENST00000416603 CC2D2BQ6DHV5 1058 aa9.15□□□□□ -0.94
THUMPD3-202ENST00000416603 ZNF395Q9H8N7 513 aaPredicted RBP9.15□□□□□ -0.94
THUMPD3-202ENST00000416603 CEP126Q9P2H0 1117 aa9.15□□□□□ -0.94
THUMPD3-202ENST00000416603 PALLDQ8WX93 1383 aa9.14□□□□□ -0.95
THUMPD3-202ENST00000416603 PPM1GO15355 546 aaPredicted RBP9.14□□□□□ -0.95
THUMPD3-202ENST00000416603 MPRIPQ6WCQ1 1025 aa9.14□□□□□ -0.95
THUMPD3-202ENST00000416603 NLGN2Q8NFZ4 835 aa9.14□□□□□ -0.95
THUMPD3-202ENST00000416603 POM121Q96HA1 1249 aa9.14□□□□□ -0.95
THUMPD3-202ENST00000416603 INSM2Q96T92 566 aaPredicted RBP9.14□□□□□ -0.95
THUMPD3-202ENST00000416603 POLMQ9NP87 494 aaPredicted RBP9.14□□□□□ -0.95
THUMPD3-202ENST00000416603 KIF24Q5T7B8 1368 aa9.13□□□□□ -0.95
THUMPD3-202ENST00000416603 SENP3-EIF4A1A0A087X0R7 540 aa9.13□□□□□ -0.95
THUMPD3-202ENST00000416603 FIGNL2A6NMB9 653 aa9.13□□□□□ -0.95
THUMPD3-202ENST00000416603 RAD21O60216 631 aa9.13□□□□□ -0.95
THUMPD3-202ENST00000416603 PTGIRP43119 386 aa9.13□□□□□ -0.95
THUMPD3-202ENST00000416603 CTSOP43234 321 aaPredicted RBP9.13□□□□□ -0.95
THUMPD3-202ENST00000416603 VEGFBP49765 207 aa9.13□□□□□ -0.95
THUMPD3-202ENST00000416603 ERVK-9P63128 1117 aa9.13□□□□□ -0.95
THUMPD3-202ENST00000416603 LCE2AQ5TA79 106 aaPredicted RBP9.13□□□□□ -0.95
THUMPD3-202ENST00000416603 COL23A1Q86Y22 540 aaPredicted RBP9.13□□□□□ -0.95
THUMPD3-202ENST00000416603 POLR3GLQ9BT43 218 aa9.13□□□□□ -0.95
THUMPD3-202ENST00000416603 ATP5J2-PTCD1G3V325 749 aa9.12□□□□□ -0.95
THUMPD3-202ENST00000416603 SCTRP47872 440 aa9.12□□□□□ -0.95
THUMPD3-202ENST00000416603 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.12□□□□□ -0.95
THUMPD3-202ENST00000416603 KDF1Q8NAX2 398 aaPredicted RBP9.12□□□□□ -0.95
THUMPD3-202ENST00000416603 CYP27B1O15528 508 aa9.11□□□□□ -0.95
THUMPD3-202ENST00000416603 SLFNL1Q499Z3 407 aa9.11□□□□□ -0.95
THUMPD3-202ENST00000416603 WWC1Q8IX03 1113 aa9.11□□□□□ -0.95
THUMPD3-202ENST00000416603 NPAS3Q8IXF0 933 aa9.11□□□□□ -0.95
THUMPD3-202ENST00000416603 CCDC85AQ96PX6 553 aaPredicted RBP9.11□□□□□ -0.95
THUMPD3-202ENST00000416603 UTRNP46939 3433 aa9.11□□□□□ -0.95
THUMPD3-202ENST00000416603 C1QTNF8P60827 252 aa9.1□□□□□ -0.95
THUMPD3-202ENST00000416603 CYP2U1Q7Z449 544 aa9.1□□□□□ -0.95
THUMPD3-202ENST00000416603 FLAD1Q8NFF5 587 aa9.1□□□□□ -0.95
THUMPD3-202ENST00000416603 SMARCC1Q92922 1105 aaPredicted RBP9.1□□□□□ -0.95
THUMPD3-202ENST00000416603 SPG7Q9UQ90 795 aa9.1□□□□□ -0.95
THUMPD3-202ENST00000416603 NCAPD2Q15021 1401 aa9.09□□□□□ -0.95
THUMPD3-202ENST00000416603 H3BM21 787 aa9.09□□□□□ -0.95
THUMPD3-202ENST00000416603 GRIN3BO60391 1043 aa9.09□□□□□ -0.95
THUMPD3-202ENST00000416603 YBX3P16989 372 aaKnown RBP eCLIP9.09□□□□□ -0.959e-6■□□□□ 10.4
THUMPD3-202ENST00000416603 HMGB2P26583 209 aaKnown RBP9.09□□□□□ -0.95
THUMPD3-202ENST00000416603 SOX11P35716 441 aa9.09□□□□□ -0.95
THUMPD3-202ENST00000416603 SEMA3FQ13275 785 aa9.09□□□□□ -0.95
THUMPD3-202ENST00000416603 RNF135Q8IUD6 432 aa9.09□□□□□ -0.95
THUMPD3-202ENST00000416603 RNF217Q8TC41 542 aa9.09□□□□□ -0.95
THUMPD3-202ENST00000416603 DOLKQ9UPQ8 538 aa9.09□□□□□ -0.95
THUMPD3-202ENST00000416603 MYCP01106 439 aaPredicted RBP9.08□□□□□ -0.96
THUMPD3-202ENST00000416603 TNNT2P45379 298 aaPredicted RBP9.08□□□□□ -0.96
THUMPD3-202ENST00000416603 LCE2CQ5TA81 110 aa9.08□□□□□ -0.96
THUMPD3-202ENST00000416603 FOXD4L5Q5VV16 416 aaPredicted RBP9.08□□□□□ -0.96
THUMPD3-202ENST00000416603 OSBPL3Q9H4L5 887 aa9.08□□□□□ -0.96
THUMPD3-202ENST00000416603 TMOD3Q9NYL9 352 aa9.08□□□□□ -0.96
THUMPD3-202ENST00000416603 WWC3Q9ULE0 1092 aa9.08□□□□□ -0.96
THUMPD3-202ENST00000416603 COL5A3P25940 1745 aaPredicted RBP9.08□□□□□ -0.96
THUMPD3-202ENST00000416603 MEN1O00255 615 aa9.07□□□□□ -0.96
THUMPD3-202ENST00000416603 SMIM5Q71RC9 77 aa9.07□□□□□ -0.96
THUMPD3-202ENST00000416603 PHTF2Q8N3S3 785 aa9.07□□□□□ -0.96
THUMPD3-202ENST00000416603 PIGBQ92521 554 aa9.07□□□□□ -0.96
THUMPD3-202ENST00000416603 PCGF6Q9BYE7 350 aa9.07□□□□□ -0.96
THUMPD3-202ENST00000416603 VIRMAQ69YN4 1812 aaKnown RBP9.07□□□□□ -0.96
THUMPD3-202ENST00000416603 N4BP2Q86UW6 1770 aaPredicted RBP9.07□□□□□ -0.96
THUMPD3-202ENST00000416603 WASHC2AQ641Q2 1341 aa9.06□□□□□ -0.96
THUMPD3-202ENST00000416603 ATP10DQ9P241 1426 aa9.06□□□□□ -0.96
THUMPD3-202ENST00000416603 LOC102724428A0A0B4J2F2 783 aa9.06□□□□□ -0.96
THUMPD3-202ENST00000416603 TRAK2O60296 914 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms