RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 ANKRD13DQ6ZTN6 518 aa12.29□□□□□ -0.44
SOX9-AS1-201ENST00000412640 MCM10Q7L590 875 aa12.29□□□□□ -0.44
SOX9-AS1-201ENST00000412640 TRMT2AQ8IZ69 625 aaKnown RBP12.29□□□□□ -0.44
SOX9-AS1-201ENST00000412640 STAP2Q9UGK3 403 aa12.29□□□□□ -0.44
SOX9-AS1-201ENST00000412640 KDM3BQ7LBC6 1761 aa12.28□□□□□ -0.44
SOX9-AS1-201ENST00000412640 NEFLP07196 543 aa12.28□□□□□ -0.44
SOX9-AS1-201ENST00000412640 USP17L8P0C7I0 530 aa12.28□□□□□ -0.44
SOX9-AS1-201ENST00000412640 CCDC146Q8IYE0 955 aa12.28□□□□□ -0.44
SOX9-AS1-201ENST00000412640 AGBL3Q8NEM8 1001 aa12.28□□□□□ -0.44
SOX9-AS1-201ENST00000412640 PHACTR3Q96KR7 559 aa12.28□□□□□ -0.44
SOX9-AS1-201ENST00000412640 PLEKHF1Q96S99 279 aa12.28□□□□□ -0.44
SOX9-AS1-201ENST00000412640 EYA3Q99504 573 aa12.28□□□□□ -0.44
SOX9-AS1-201ENST00000412640 PNNQ9H307 717 aaKnown RBP12.28□□□□□ -0.44
SOX9-AS1-201ENST00000412640 MIS18AQ9NYP9 233 aa12.28□□□□□ -0.44
SOX9-AS1-201ENST00000412640 U2AF1L5P0DN76 240 aaPredicted RBP12.27□□□□□ -0.45
SOX9-AS1-201ENST00000412640 COL9A1P20849 921 aa12.27□□□□□ -0.45
SOX9-AS1-201ENST00000412640 U2AF1Q01081 240 aaKnown RBP eCLIP12.27□□□□□ -0.45
SOX9-AS1-201ENST00000412640 GOLGA2Q08379 1002 aa12.27□□□□□ -0.45
SOX9-AS1-201ENST00000412640 DCTN1Q14203 1278 aa12.27□□□□□ -0.45
SOX9-AS1-201ENST00000412640 MTFR1Q15390 333 aa12.27□□□□□ -0.45
SOX9-AS1-201ENST00000412640 TMC4Q7Z404 712 aa12.27□□□□□ -0.45
SOX9-AS1-201ENST00000412640 CELF1Q92879 486 aaKnown RBP12.27□□□□□ -0.45
SOX9-AS1-201ENST00000412640 ZNF428Q96B54 188 aa12.27□□□□□ -0.45
SOX9-AS1-201ENST00000412640 WNK4Q96J92 1243 aa12.27□□□□□ -0.45
SOX9-AS1-201ENST00000412640 CLMNQ96JQ2 1002 aa12.27□□□□□ -0.45
SOX9-AS1-201ENST00000412640 GMLQ99445 158 aa12.27□□□□□ -0.45
SOX9-AS1-201ENST00000412640 HTATIP2Q9BUP3 242 aa12.27□□□□□ -0.45
SOX9-AS1-201ENST00000412640 ZC3H12CQ9C0D7 883 aaKnown RBP12.27□□□□□ -0.45
SOX9-AS1-201ENST00000412640 MTMR10Q9NXD2 777 aa12.27□□□□□ -0.45
SOX9-AS1-201ENST00000412640 LRRC37AA6NMS7 1700 aa12.26□□□□□ -0.45
SOX9-AS1-201ENST00000412640 ANKRD36CQ5JPF3 1778 aa12.26□□□□□ -0.45
SOX9-AS1-201ENST00000412640 SLFN5Q08AF3 891 aa12.26□□□□□ -0.45
SOX9-AS1-201ENST00000412640 TBC1D16Q8TBP0 767 aa12.26□□□□□ -0.45
SOX9-AS1-201ENST00000412640 CDCA7LQ96GN5 454 aa12.26□□□□□ -0.45
SOX9-AS1-201ENST00000412640 PTPN18Q99952 460 aa12.26□□□□□ -0.45
SOX9-AS1-201ENST00000412640 SALL2Q9Y467 1007 aaPredicted RBP12.26□□□□□ -0.45
SOX9-AS1-201ENST00000412640 ERBB4Q15303 1308 aa12.26□□□□□ -0.45
SOX9-AS1-201ENST00000412640 DDX60Q8IY21 1712 aaKnown RBP12.25□□□□□ -0.45
SOX9-AS1-201ENST00000412640 ZBTB48P10074 688 aaPredicted RBP12.25□□□□□ -0.45
SOX9-AS1-201ENST00000412640 DUSP27Q5VZP5 1158 aa12.25□□□□□ -0.45
SOX9-AS1-201ENST00000412640 OTUD7BQ6GQQ9 843 aa12.25□□□□□ -0.45
SOX9-AS1-201ENST00000412640 WWC1Q8IX03 1113 aa12.25□□□□□ -0.45
SOX9-AS1-201ENST00000412640 RAPGEFL1Q9UHV5 662 aa12.25□□□□□ -0.45
SOX9-AS1-201ENST00000412640 E9PSI1 815 aa12.24□□□□□ -0.45
SOX9-AS1-201ENST00000412640 WNT10BO00744 389 aa12.24□□□□□ -0.45
SOX9-AS1-201ENST00000412640 VCANP13611 3396 aa12.24□□□□□ -0.45
SOX9-AS1-201ENST00000412640 GJA5P36382 358 aa12.24□□□□□ -0.45
SOX9-AS1-201ENST00000412640 ARHGEF6Q15052 776 aa12.24□□□□□ -0.45
SOX9-AS1-201ENST00000412640 GPR153Q6NV75 609 aa12.24□□□□□ -0.45
SOX9-AS1-201ENST00000412640 UBE2Q1Q7Z7E8 422 aa12.24□□□□□ -0.45
SOX9-AS1-201ENST00000412640 WDR63Q8IWG1 891 aa12.24□□□□□ -0.45
SOX9-AS1-201ENST00000412640 RTF1Q92541 710 aaKnown RBP12.24□□□□□ -0.45
SOX9-AS1-201ENST00000412640 NECTIN2Q92692 538 aa12.24□□□□□ -0.45
SOX9-AS1-201ENST00000412640 RSPH6AQ9H0K4 717 aa12.24□□□□□ -0.45
SOX9-AS1-201ENST00000412640 TRMT112Q9UI30 125 aaKnown RBP12.24□□□□□ -0.45
SOX9-AS1-201ENST00000412640 LAMB4A4D0S4 1761 aa12.23□□□□□ -0.45
SOX9-AS1-201ENST00000412640 THUMPD2Q9BTF0 503 aaKnown RBP12.23□□□□□ -0.45
SOX9-AS1-201ENST00000412640 ARHGAP39Q9C0H5 1083 aa12.23□□□□□ -0.45
SOX9-AS1-201ENST00000412640 COL4A1P02462 1669 aa12.22□□□□□ -0.45
SOX9-AS1-201ENST00000412640 EVI5O60447 810 aa12.22□□□□□ -0.45
SOX9-AS1-201ENST00000412640 ECM2O94769 699 aaPredicted RBP12.22□□□□□ -0.45
SOX9-AS1-201ENST00000412640 SASH1O94885 1247 aa12.22□□□□□ -0.45
SOX9-AS1-201ENST00000412640 PRKAR2BP31323 418 aa12.22□□□□□ -0.45
SOX9-AS1-201ENST00000412640 NLRP10Q86W26 655 aa12.22□□□□□ -0.45
SOX9-AS1-201ENST00000412640 MXD3Q9BW11 206 aa12.22□□□□□ -0.45
SOX9-AS1-201ENST00000412640 RCAN3Q9UKA8 241 aa12.22□□□□□ -0.45
SOX9-AS1-201ENST00000412640 SPTBN5Q9NRC6 3674 aaKnown RBP12.22□□□□□ -0.45
SOX9-AS1-201ENST00000412640 USP17L3A6NCW0 530 aa12.21□□□□□ -0.45
SOX9-AS1-201ENST00000412640 USP17L4A6NCW7 530 aa12.21□□□□□ -0.45
SOX9-AS1-201ENST00000412640 UFL1O94874 794 aa12.21□□□□□ -0.45
SOX9-AS1-201ENST00000412640 TMPOP42166 694 aaKnown RBP12.21□□□□□ -0.45
SOX9-AS1-201ENST00000412640 TAF7Q15545 349 aaPredicted RBP12.21□□□□□ -0.45
SOX9-AS1-201ENST00000412640 USP17L1Q7RTZ2 530 aa12.21□□□□□ -0.45
SOX9-AS1-201ENST00000412640 ZSWIM8A7E2V4 1837 aa12.21□□□□□ -0.46
SOX9-AS1-201ENST00000412640 IL16Q14005 1332 aa12.2□□□□□ -0.46
SOX9-AS1-201ENST00000412640 SH3TC1Q8TE82 1336 aa12.2□□□□□ -0.46
SOX9-AS1-201ENST00000412640 GJA8P48165 433 aa12.2□□□□□ -0.46
SOX9-AS1-201ENST00000412640 BCAMP50895 628 aa12.2□□□□□ -0.46
SOX9-AS1-201ENST00000412640 TAF1CQ15572 869 aaPredicted RBP12.2□□□□□ -0.46
SOX9-AS1-201ENST00000412640 NKX2-3Q8TAU0 364 aa12.2□□□□□ -0.46
SOX9-AS1-201ENST00000412640 MAPK8IP3Q9UPT6 1336 aa12.19□□□□□ -0.46
SOX9-AS1-201ENST00000412640 TESPA1A2RU30 521 aaPredicted RBP12.19□□□□□ -0.46
SOX9-AS1-201ENST00000412640 FARP2O94887 1054 aaPredicted RBP12.19□□□□□ -0.46
SOX9-AS1-201ENST00000412640 MAP3K11Q16584 847 aa12.19□□□□□ -0.46
SOX9-AS1-201ENST00000412640 OGFOD1Q8N543 542 aa12.19□□□□□ -0.46
SOX9-AS1-201ENST00000412640 GDF15Q99988 308 aa12.19□□□□□ -0.46
SOX9-AS1-201ENST00000412640 ZFYVE28Q9HCC9 887 aa12.19□□□□□ -0.46
SOX9-AS1-201ENST00000412640 SPINK5Q9NQ38 1064 aaPredicted RBP12.19□□□□□ -0.46
SOX9-AS1-201ENST00000412640 ANKIB1Q9P2G1 1089 aa12.19□□□□□ -0.46
SOX9-AS1-201ENST00000412640 PPP1R12BO60237 982 aaPredicted RBP12.18□□□□□ -0.46
SOX9-AS1-201ENST00000412640 ANXA1P04083 346 aa12.18□□□□□ -0.46
SOX9-AS1-201ENST00000412640 GJB1P08034 283 aa12.18□□□□□ -0.46
SOX9-AS1-201ENST00000412640 CCL5P13501 91 aa12.18□□□□□ -0.46
SOX9-AS1-201ENST00000412640 RPS8P62241 208 aaKnown RBP12.18□□□□□ -0.46
SOX9-AS1-201ENST00000412640 APOBEC3FQ8IUX4 373 aaKnown RBP12.18□□□□□ -0.46
SOX9-AS1-201ENST00000412640 GGA1Q9UJY5 639 aa12.18□□□□□ -0.46
SOX9-AS1-201ENST00000412640 TRIM35Q9UPQ4 493 aa12.18□□□□□ -0.46
SOX9-AS1-201ENST00000412640 ZNF646O15015 1829 aaPredicted RBP12.18□□□□□ -0.46
SOX9-AS1-201ENST00000412640 LAMB1P07942 1786 aa12.18□□□□□ -0.46
SOX9-AS1-201ENST00000412640 RPTORQ8N122 1335 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms