RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 KCNQ4P56696 695 aa7.83□□□□□ -1.16
LINC00342-201ENST00000412393 L3MBTL2Q969R5 705 aa7.83□□□□□ -1.16
LINC00342-201ENST00000412393 SNRKQ9NRH2 765 aa7.83□□□□□ -1.16
LINC00342-201ENST00000412393 RNF112Q9ULX5 631 aa7.83□□□□□ -1.16
LINC00342-201ENST00000412393 PLEKHG1Q9ULL1 1385 aa7.83□□□□□ -1.16
LINC00342-201ENST00000412393 A0A0A0MRY4 1105 aa7.82□□□□□ -1.16
LINC00342-201ENST00000412393 HFM1A2PYH4 1435 aa7.82□□□□□ -1.16
LINC00342-201ENST00000412393 LZTS3O60299 673 aaPredicted RBP7.82□□□□□ -1.16
LINC00342-201ENST00000412393 SLC24A1O60721 1099 aa7.82□□□□□ -1.16
LINC00342-201ENST00000412393 KCNA6P17658 529 aa7.82□□□□□ -1.16
LINC00342-201ENST00000412393 NWD1Q149M9 1564 aa7.82□□□□□ -1.16
LINC00342-201ENST00000412393 MCTP1Q6DN14 999 aa7.82□□□□□ -1.16
LINC00342-201ENST00000412393 LRRC69Q6ZNQ3 347 aa7.82□□□□□ -1.16
LINC00342-201ENST00000412393 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.82□□□□□ -1.16
LINC00342-201ENST00000412393 ANKIB1Q9P2G1 1089 aa7.82□□□□□ -1.16
LINC00342-201ENST00000412393 DISP3Q9P2K9 1392 aa7.82□□□□□ -1.16
LINC00342-201ENST00000412393 HSPA1LP34931 641 aa7.81□□□□□ -1.16
LINC00342-201ENST00000412393 NOS2P35228 1153 aa7.81□□□□□ -1.16
LINC00342-201ENST00000412393 TXLNAP40222 546 aa7.81□□□□□ -1.16
LINC00342-201ENST00000412393 TXKP42681 527 aa7.81□□□□□ -1.16
LINC00342-201ENST00000412393 PROSER2Q86WR7 435 aaPredicted RBP7.81□□□□□ -1.16
LINC00342-201ENST00000412393 TP53INP1Q96A56 240 aa7.81□□□□□ -1.16
LINC00342-201ENST00000412393 SLC30A3Q99726 388 aa7.81□□□□□ -1.16
LINC00342-201ENST00000412393 SSBP4Q9BWG4 385 aaPredicted RBP7.81□□□□□ -1.16
LINC00342-201ENST00000412393 USP3Q9Y6I4 520 aa7.81□□□□□ -1.16
LINC00342-201ENST00000412393 CLTCL1P53675 1640 aa7.81□□□□□ -1.16
LINC00342-201ENST00000412393 NKTRP30414 1462 aaKnown RBP7.81□□□□□ -1.16
LINC00342-201ENST00000412393 TRPM2O94759 1503 aa7.8□□□□□ -1.16
LINC00342-201ENST00000412393 PAX4O43316 350 aa7.8□□□□□ -1.16
LINC00342-201ENST00000412393 WASHC4Q2M389 1173 aa7.8□□□□□ -1.16
LINC00342-201ENST00000412393 TBC1D2BQ9UPU7 963 aa7.8□□□□□ -1.16
LINC00342-201ENST00000412393 TBX22Q9Y458 520 aa7.8□□□□□ -1.16
LINC00342-201ENST00000412393 TMEM94Q12767 1356 aa7.8□□□□□ -1.16
LINC00342-201ENST00000412393 DIP2AQ14689 1571 aa7.8□□□□□ -1.16
LINC00342-201ENST00000412393 SFSWAPQ12872 951 aaKnown RBP7.79□□□□□ -1.16
LINC00342-201ENST00000412393 ZNF326Q5BKZ1 582 aaKnown RBP7.79□□□□□ -1.16
LINC00342-201ENST00000412393 C1orf53Q5VUE5 145 aa7.79□□□□□ -1.16
LINC00342-201ENST00000412393 C8orf86Q6ZUL3 223 aa7.79□□□□□ -1.16
LINC00342-201ENST00000412393 IL27Q8NEV9 243 aa7.79□□□□□ -1.16
LINC00342-201ENST00000412393 C7orf43Q8WVR3 580 aa7.79□□□□□ -1.16
LINC00342-201ENST00000412393 PCDHGA11Q9Y5H2 935 aa7.79□□□□□ -1.16
LINC00342-201ENST00000412393 ADAMTS13Q76LX8 1427 aa7.78□□□□□ -1.16
LINC00342-201ENST00000412393 IRF5Q13568 498 aa7.78□□□□□ -1.16
LINC00342-201ENST00000412393 DTWD1Q8N5C7 304 aa7.78□□□□□ -1.16
LINC00342-201ENST00000412393 ZDHHC1Q8WTX9 485 aa7.78□□□□□ -1.16
LINC00342-201ENST00000412393 PARP3Q9Y6F1 533 aa7.78□□□□□ -1.16
LINC00342-201ENST00000412393 PIK3R4Q99570 1358 aa7.77□□□□□ -1.17
LINC00342-201ENST00000412393 BRD7Q9NPI1 651 aa7.77□□□□□ -1.17
LINC00342-201ENST00000412393 USP21Q9UK80 565 aa7.77□□□□□ -1.17
LINC00342-201ENST00000412393 KCNH4Q9UQ05 1017 aa7.77□□□□□ -1.17
LINC00342-201ENST00000412393 NRXN3Q9Y4C0 1643 aa7.77□□□□□ -1.17
LINC00342-201ENST00000412393 SETBP1Q9Y6X0 1596 aa7.76□□□□□ -1.17
LINC00342-201ENST00000412393 MSH6P52701 1360 aa7.76□□□□□ -1.17
LINC00342-201ENST00000412393 SERTM1A2A2V5 107 aa7.76□□□□□ -1.17
LINC00342-201ENST00000412393 HIRAP54198 1017 aaPredicted RBP7.76□□□□□ -1.17
LINC00342-201ENST00000412393 SEMA3FQ13275 785 aa7.76□□□□□ -1.17
LINC00342-201ENST00000412393 EML3Q32P44 896 aa7.76□□□□□ -1.17
LINC00342-201ENST00000412393 FMR1NBQ8N0W7 255 aaPredicted RBP7.76□□□□□ -1.17
LINC00342-201ENST00000412393 RHPN1Q8TCX5 695 aa7.76□□□□□ -1.17
LINC00342-201ENST00000412393 ZNF232Q9UNY5 417 aa7.76□□□□□ -1.17
LINC00342-201ENST00000412393 NOD1Q9Y239 953 aa7.76□□□□□ -1.17
LINC00342-201ENST00000412393 NEXMIFQ5QGS0 1516 aa7.76□□□□□ -1.17
LINC00342-201ENST00000412393 ROBO1Q9Y6N7 1651 aa7.76□□□□□ -1.17
LINC00342-201ENST00000412393 MED1Q15648 1581 aaPredicted RBP7.76□□□□□ -1.17
LINC00342-201ENST00000412393 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.75□□□□□ -1.17
LINC00342-201ENST00000412393 PPLO60437 1756 aa7.75□□□□□ -1.17
LINC00342-201ENST00000412393 YBX3P16989 372 aaKnown RBP eCLIP7.75□□□□□ -1.17
LINC00342-201ENST00000412393 EPHA4P54764 986 aa7.75□□□□□ -1.17
LINC00342-201ENST00000412393 ILDR2Q71H61 639 aa7.75□□□□□ -1.17
LINC00342-201ENST00000412393 C14orf37Q86TY3 774 aa7.75□□□□□ -1.17
LINC00342-201ENST00000412393 CEP63Q96MT8 703 aa7.75□□□□□ -1.17
LINC00342-201ENST00000412393 JPH1Q9HDC5 661 aaPredicted RBP7.75□□□□□ -1.17
LINC00342-201ENST00000412393 CHMP3Q9Y3E7 222 aa7.75□□□□□ -1.17
LINC00342-201ENST00000412393 FAM135BQ49AJ0 1406 aa7.75□□□□□ -1.17
LINC00342-201ENST00000412393 XRN1Q8IZH2 1706 aaKnown RBP7.75□□□□□ -1.17
LINC00342-201ENST00000412393 PCSK7Q16549 785 aa7.74□□□□□ -1.17
LINC00342-201ENST00000412393 HIF1AQ16665 826 aa7.74□□□□□ -1.17
LINC00342-201ENST00000412393 SLC9A9Q8IVB4 645 aa7.74□□□□□ -1.17
LINC00342-201ENST00000412393 FMNL2Q96PY5 1086 aa7.74□□□□□ -1.17
LINC00342-201ENST00000412393 ZNF358Q9NW07 568 aa7.74□□□□□ -1.17
LINC00342-201ENST00000412393 AMOTL2Q9Y2J4 779 aa7.74□□□□□ -1.17
LINC00342-201ENST00000412393 PTPRUQ92729 1446 aa7.74□□□□□ -1.17
LINC00342-201ENST00000412393 NCOA3Q9Y6Q9 1424 aa7.74□□□□□ -1.17
LINC00342-201ENST00000412393 SETD1AO15047 1707 aaKnown RBP7.73□□□□□ -1.17
LINC00342-201ENST00000412393 PHLPP1O60346 1717 aa7.73□□□□□ -1.17
LINC00342-201ENST00000412393 SETD5Q9C0A6 1442 aa7.73□□□□□ -1.17
LINC00342-201ENST00000412393 VAC14Q08AM6 782 aa7.73□□□□□ -1.17
LINC00342-201ENST00000412393 NEUROD2Q15784 382 aa7.73□□□□□ -1.17
LINC00342-201ENST00000412393 SHISA2Q6UWI4 295 aa7.73□□□□□ -1.17
LINC00342-201ENST00000412393 NFATC2IPQ8NCF5 419 aa7.73□□□□□ -1.17
LINC00342-201ENST00000412393 MPHOSPH9Q99550 1183 aa7.73□□□□□ -1.17
LINC00342-201ENST00000412393 SLC6A14Q9UN76 642 aa7.73□□□□□ -1.17
LINC00342-201ENST00000412393 ACIN1Q9UKV3 1341 aaKnown RBP7.73□□□□□ -1.17
LINC00342-201ENST00000412393 AFF1P51825 1210 aaKnown RBP7.72□□□□□ -1.17
LINC00342-201ENST00000412393 PSMA6P60900 246 aaKnown RBP7.72□□□□□ -1.17
LINC00342-201ENST00000412393 GTF2IP78347 998 aa7.72□□□□□ -1.17
LINC00342-201ENST00000412393 PSME1Q06323 249 aa7.72□□□□□ -1.17
LINC00342-201ENST00000412393 TYRO3Q06418 890 aa7.72□□□□□ -1.17
LINC00342-201ENST00000412393 POTEAQ6S8J7 498 aa7.72□□□□□ -1.17
LINC00342-201ENST00000412393 UBE2OQ9C0C9 1292 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms