RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 KIF4AO95239 1232 aa3.55□□□□□ -1.84
RNU2-55P-201ENST00000411146 IGLV1-40P01703 118 aa3.55□□□□□ -1.84
RNU2-55P-201ENST00000411146 CDC27P30260 824 aa3.55□□□□□ -1.84
RNU2-55P-201ENST00000411146 HOXA10P31260 410 aaPredicted RBP3.55□□□□□ -1.84
RNU2-55P-201ENST00000411146 HYAL2Q12891 473 aa3.55□□□□□ -1.84
RNU2-55P-201ENST00000411146 MTMR3Q13615 1198 aa3.55□□□□□ -1.84
RNU2-55P-201ENST00000411146 ELOAQ14241 798 aaKnown RBP3.55□□□□□ -1.84
RNU2-55P-201ENST00000411146 SWI5Q1ZZU3 235 aa3.55□□□□□ -1.84
RNU2-55P-201ENST00000411146 PIK3R5Q8WYR1 880 aa3.55□□□□□ -1.84
RNU2-55P-201ENST00000411146 NUDT16Q96DE0 195 aaKnown RBP3.55□□□□□ -1.84
RNU2-55P-201ENST00000411146 FAM46AQ96IP4 442 aaKnown RBP3.55□□□□□ -1.84
RNU2-55P-201ENST00000411146 FMNL2Q96PY5 1086 aa3.55□□□□□ -1.84
RNU2-55P-201ENST00000411146 PBX4Q9BYU1 374 aa3.55□□□□□ -1.84
RNU2-55P-201ENST00000411146 ZMYND15Q9H091 742 aa3.55□□□□□ -1.84
RNU2-55P-201ENST00000411146 C7orf69Q9H7B7 122 aa3.55□□□□□ -1.84
RNU2-55P-201ENST00000411146 ELP3Q9H9T3 547 aa3.55□□□□□ -1.84
RNU2-55P-201ENST00000411146 STIM2Q9P246 746 aa3.55□□□□□ -1.84
RNU2-55P-201ENST00000411146 STOML1Q9UBI4 398 aa3.55□□□□□ -1.84
RNU2-55P-201ENST00000411146 DLGAP3O95886 979 aa3.54□□□□□ -1.84
RNU2-55P-201ENST00000411146 PREPP48147 710 aa3.54□□□□□ -1.84
RNU2-55P-201ENST00000411146 DUOXA2Q1HG44 320 aa3.54□□□□□ -1.84
RNU2-55P-201ENST00000411146 TTC39BQ5VTQ0 682 aaPredicted RBP3.54□□□□□ -1.84
RNU2-55P-201ENST00000411146 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.54□□□□□ -1.84
RNU2-55P-201ENST00000411146 ABI2Q9NYB9 513 aaPredicted RBP3.54□□□□□ -1.84
RNU2-55P-201ENST00000411146 SALL4Q9UJQ4 1053 aa3.54□□□□□ -1.84
RNU2-55P-201ENST00000411146 KIAA1324LA8MWY0 1029 aaPredicted RBP3.53□□□□□ -1.84
RNU2-55P-201ENST00000411146 SOX1O00570 391 aaPredicted RBP3.53□□□□□ -1.84
RNU2-55P-201ENST00000411146 ATG7O95352 703 aa3.53□□□□□ -1.84
RNU2-55P-201ENST00000411146 TAL1P17542 331 aaPredicted RBP3.53□□□□□ -1.84
RNU2-55P-201ENST00000411146 ARID4AP29374 1257 aaPredicted RBP3.53□□□□□ -1.84
RNU2-55P-201ENST00000411146 NLRP12P59046 1061 aa3.53□□□□□ -1.84
RNU2-55P-201ENST00000411146 NFIAQ12857 509 aa3.53□□□□□ -1.84
RNU2-55P-201ENST00000411146 NCAPG2Q86XI2 1143 aa3.53□□□□□ -1.84
RNU2-55P-201ENST00000411146 EDEM1Q92611 657 aa3.53□□□□□ -1.84
RNU2-55P-201ENST00000411146 ADAM19Q9H013 955 aa3.53□□□□□ -1.84
RNU2-55P-201ENST00000411146 RBSNQ9H1K0 784 aa3.53□□□□□ -1.84
RNU2-55P-201ENST00000411146 CHRDQ9H2X0 955 aa3.53□□□□□ -1.84
RNU2-55P-201ENST00000411146 DZANK1Q9NVP4 752 aa3.53□□□□□ -1.84
RNU2-55P-201ENST00000411146 ARID3CA6NKF2 412 aa3.52□□□□□ -1.85
RNU2-55P-201ENST00000411146 PAX4O43316 350 aa3.52□□□□□ -1.85
RNU2-55P-201ENST00000411146 SMNDC1O75940 238 aaKnown RBP eCLIP3.52□□□□□ -1.85
RNU2-55P-201ENST00000411146 BMP3P12645 472 aa3.52□□□□□ -1.85
RNU2-55P-201ENST00000411146 DRD2P14416 443 aa3.52□□□□□ -1.85
RNU2-55P-201ENST00000411146 GP2P55259 537 aaKnown RBP3.52□□□□□ -1.85
RNU2-55P-201ENST00000411146 DNM1Q05193 864 aaKnown RBP3.52□□□□□ -1.85
RNU2-55P-201ENST00000411146 RNF43Q68DV7 783 aa3.52□□□□□ -1.85
RNU2-55P-201ENST00000411146 FAM20CQ8IXL6 584 aa3.52□□□□□ -1.85
RNU2-55P-201ENST00000411146 SHKBP1Q8TBC3 707 aa3.52□□□□□ -1.85
RNU2-55P-201ENST00000411146 SLC7A3Q8WY07 619 aa3.52□□□□□ -1.85
RNU2-55P-201ENST00000411146 CLP1Q92989 425 aaKnown RBP3.52□□□□□ -1.85
RNU2-55P-201ENST00000411146 UTP4Q969X6 686 aaKnown RBP3.52□□□□□ -1.85
RNU2-55P-201ENST00000411146 SRA1Q9HD15 236 aaKnown RBP3.52□□□□□ -1.85
RNU2-55P-201ENST00000411146 LATS2Q9NRM7 1088 aa3.52□□□□□ -1.85
RNU2-55P-201ENST00000411146 METTL12A8MUP2 240 aa3.51□□□□□ -1.85
RNU2-55P-201ENST00000411146 EREGO14944 169 aa3.51□□□□□ -1.85
RNU2-55P-201ENST00000411146 DHX15O43143 795 aaKnown RBP3.51□□□□□ -1.85
RNU2-55P-201ENST00000411146 COBLO75128 1261 aa3.51□□□□□ -1.85
RNU2-55P-201ENST00000411146 PDGFAP04085 211 aa3.51□□□□□ -1.85
RNU2-55P-201ENST00000411146 SPINK2P20155 84 aa3.51□□□□□ -1.85
RNU2-55P-201ENST00000411146 ATP2B4P23634 1241 aa3.51□□□□□ -1.85
RNU2-55P-201ENST00000411146 COL19A1Q14993 1142 aa3.51□□□□□ -1.85
RNU2-55P-201ENST00000411146 SGO2Q562F6 1265 aa3.51□□□□□ -1.85
RNU2-55P-201ENST00000411146 NFXL1Q6ZNB6 911 aa3.51□□□□□ -1.85
RNU2-55P-201ENST00000411146 BEND4Q6ZU67 534 aa3.51□□□□□ -1.85
RNU2-55P-201ENST00000411146 VN1R5Q7Z5H4 357 aa3.51□□□□□ -1.85
RNU2-55P-201ENST00000411146 MAP4K3Q8IVH8 894 aa3.51□□□□□ -1.85
RNU2-55P-201ENST00000411146 SPACA7Q96KW9 195 aa3.51□□□□□ -1.85
RNU2-55P-201ENST00000411146 MYRFLQ96LU7 910 aa3.51□□□□□ -1.85
RNU2-55P-201ENST00000411146 MFSD14AQ96MC6 490 aa3.51□□□□□ -1.85
RNU2-55P-201ENST00000411146 SEC31BQ9NQW1 1179 aa3.51□□□□□ -1.85
RNU2-55P-201ENST00000411146 FOXD3Q9UJU5 478 aaPredicted RBP3.51□□□□□ -1.85
RNU2-55P-201ENST00000411146 WDR64B1ANS9 1081 aa3.5□□□□□ -1.85
RNU2-55P-201ENST00000411146 PDE2AO00408 941 aaPredicted RBP3.5□□□□□ -1.85
RNU2-55P-201ENST00000411146 POLR3DP05423 398 aaPredicted RBP3.5□□□□□ -1.85
RNU2-55P-201ENST00000411146 CTSBP07858 339 aa3.5□□□□□ -1.85
RNU2-55P-201ENST00000411146 PTPRAP18433 802 aa3.5□□□□□ -1.85
RNU2-55P-201ENST00000411146 CES1P23141 567 aa3.5□□□□□ -1.85
RNU2-55P-201ENST00000411146 MPSTP25325 297 aa3.5□□□□□ -1.85
RNU2-55P-201ENST00000411146 ADMP35318 185 aa3.5□□□□□ -1.85
RNU2-55P-201ENST00000411146 C8orf34Q49A92 452 aa3.5□□□□□ -1.85
RNU2-55P-201ENST00000411146 ZNF438Q7Z4V0 828 aa3.5□□□□□ -1.85
RNU2-55P-201ENST00000411146 CLEC10AQ8IUN9 316 aa3.5□□□□□ -1.85
RNU2-55P-201ENST00000411146 NXPE3Q969Y0 559 aa3.5□□□□□ -1.85
RNU2-55P-201ENST00000411146 FAM83CQ9BQN1 747 aa3.5□□□□□ -1.85
RNU2-55P-201ENST00000411146 ZKSCAN3Q9BRR0 538 aa3.5□□□□□ -1.85
RNU2-55P-201ENST00000411146 MUC3BQ9H195 1237 aa3.5□□□□□ -1.85
RNU2-55P-201ENST00000411146 KCNF1Q9H3M0 494 aa3.5□□□□□ -1.85
RNU2-55P-201ENST00000411146 SOX13Q9UN79 622 aa3.5□□□□□ -1.85
RNU2-55P-201ENST00000411146 POLIQ9UNA4 740 aa3.5□□□□□ -1.85
RNU2-55P-201ENST00000411146 H3BRJ5 948 aa3.49□□□□□ -1.85
RNU2-55P-201ENST00000411146 GSC2O15499 205 aa3.49□□□□□ -1.85
RNU2-55P-201ENST00000411146 PTCD1O75127 700 aaKnown RBP3.49□□□□□ -1.85
RNU2-55P-201ENST00000411146 F13BP05160 661 aa3.49□□□□□ -1.85
RNU2-55P-201ENST00000411146 TXKP42681 527 aa3.49□□□□□ -1.85
RNU2-55P-201ENST00000411146 EIF1AXP47813 144 aaKnown RBP3.49□□□□□ -1.85
RNU2-55P-201ENST00000411146 IRAK1P51617 712 aa3.49□□□□□ -1.85
RNU2-55P-201ENST00000411146 PEAR1Q5VY43 1037 aaPredicted RBP3.49□□□□□ -1.85
RNU2-55P-201ENST00000411146 PDE12Q6L8Q7 609 aaKnown RBP3.49□□□□□ -1.85
RNU2-55P-201ENST00000411146 PHLDB3Q6NSJ2 640 aa3.49□□□□□ -1.85
RNU2-55P-201ENST00000411146 CDPF1Q6NVV7 123 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms