RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 PLCB3Q01970 1234 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 TRIML1Q8N9V2 468 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 ATP6V0A1Q93050 837 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 NUCKS1Q9H1E3 243 aaKnown RBP3.83□□□□□ -1.8
NEB-204ENST00000409198 AS3MTQ9HBK9 375 aa3.83□□□□□ -1.8
NEB-204ENST00000409198 KANK3Q6NY19 840 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 USH1CQ9Y6N9 552 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 FAM47CQ5HY64 1035 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 SPDYE1Q8NFV5 336 aaPredicted RBP3.82□□□□□ -1.8
NEB-204ENST00000409198 TTC1Q99614 292 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 EIF4G3O43432 1585 aaKnown RBP3.82□□□□□ -1.8
NEB-204ENST00000409198 STMN1P16949 149 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 RILPL1Q5EBL4 403 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 WDR44Q5JSH3 913 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 LARP1BQ659C4 914 aaKnown RBP3.82□□□□□ -1.8
NEB-204ENST00000409198 SND1Q7KZF4 910 aaKnown RBP eCLIP3.82□□□□□ -1.8
NEB-204ENST00000409198 RAB11FIP4Q86YS3 637 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 ATP6V1E2Q96A05 226 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 FNBP1Q96RU3 617 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 EPRSP07814 1512 aaKnown RBP3.82□□□□□ -1.8
NEB-204ENST00000409198 WASHC5Q12768 1159 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 HVCN1Q96D96 273 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 NUP88Q99567 741 aaPredicted RBP3.82□□□□□ -1.8
NEB-204ENST00000409198 SLC12A7Q9Y666 1083 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 KRT3P12035 628 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 NUDT18Q6ZVK8 323 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 MCF2L2Q86YR7 1114 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 CHMP6Q96FZ7 201 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 TRIM56Q9BRZ2 755 aaKnown RBP3.82□□□□□ -1.8
NEB-204ENST00000409198 PEG3Q9GZU2 1588 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 FAM135AQ9P2D6 1515 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 CCDC50Q8IVM0 306 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 NUF2Q9BZD4 464 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 FAM107BQ9H098 131 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 MBIPQ9NS73 344 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 ZNF165P49910 485 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 BPIFB4P59827 614 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 PNMA8AQ86V59 439 aaPredicted RBP3.82□□□□□ -1.8
NEB-204ENST00000409198 SYNDIG1Q9H7V2 258 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 PDRG1Q9NUG6 133 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 TACC1O75410 805 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 STRN3Q13033 797 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 GBP6Q6ZN66 633 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 AZI2Q9H6S1 392 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 MYBBP1AQ9BQG0 1328 aaKnown RBP3.82□□□□□ -1.8
NEB-204ENST00000409198 CASQ2O14958 399 aaPredicted RBP3.82□□□□□ -1.8
NEB-204ENST00000409198 ARHGAP27Q6ZUM4 889 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 RDH13Q8NBN7 331 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 RBM17Q96I25 401 aaKnown RBP3.82□□□□□ -1.8
NEB-204ENST00000409198 MED10Q9BTT4 135 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 NEUROG2Q9H2A3 272 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 IPO11Q9UI26 975 aaKnown RBP3.82□□□□□ -1.8
NEB-204ENST00000409198 FYCO1Q9BQS8 1478 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 UQCRFS1P1P0C7P4 283 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 PLCG2P16885 1265 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 ELF1P32519 619 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 DIXDC1Q155Q3 683 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 CARD10Q9BWT7 1032 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 COPRSQ9NQ92 184 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 ZSCAN32Q9NX65 697 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 WDR33Q9C0J8 1336 aaKnown RBP3.82□□□□□ -1.8
NEB-204ENST00000409198 FIBPO43427 364 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 RNF8O76064 485 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 ITIH3Q06033 890 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 MORC4Q8TE76 937 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 SMCR8Q8TEV9 937 aaPredicted RBP3.82□□□□□ -1.8
NEB-204ENST00000409198 ARHGEF1Q92888 912 aaKnown RBP3.82□□□□□ -1.8
NEB-204ENST00000409198 C22orf23Q9BZE7 217 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 EXOC7Q9UPT5 735 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 FASTKD5Q7L8L6 764 aaKnown RBP3.82□□□□□ -1.8
NEB-204ENST00000409198 KIFAP3Q92845 792 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 SPDYE2BA6NHP3 402 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 SPDYE6P0CI01 402 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 NEK4P51957 841 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 PDCD2Q16342 344 aaPredicted RBP3.82□□□□□ -1.8
NEB-204ENST00000409198 ZBED9Q6R2W3 1325 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 UBA7P41226 1012 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 IRX3P78415 501 aaPredicted RBP3.82□□□□□ -1.8
NEB-204ENST00000409198 CCDC170Q8IYT3 715 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 MAP10Q9P2G4 905 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 RTCBQ9Y3I0 505 aaKnown RBP3.82□□□□□ -1.8
NEB-204ENST00000409198 CTTNBP2Q8WZ74 1663 aa3.82□□□□□ -1.8
NEB-204ENST00000409198 HNRNPCL2B2RXH8 293 aa3.81□□□□□ -1.8
NEB-204ENST00000409198 HNRNPCL1O60812 293 aaKnown RBP3.81□□□□□ -1.8
NEB-204ENST00000409198 EFCAB14O75071 495 aa3.81□□□□□ -1.8
NEB-204ENST00000409198 PPP2R5DQ14738 602 aa3.81□□□□□ -1.8
NEB-204ENST00000409198 INF2Q27J81 1249 aa3.81□□□□□ -1.8
NEB-204ENST00000409198 CEP120Q8N960 986 aa3.81□□□□□ -1.8
NEB-204ENST00000409198 PAIP2Q9BPZ3 127 aaKnown RBP3.81□□□□□ -1.8
NEB-204ENST00000409198 RETREG2Q8NC44 543 aa3.81□□□□□ -1.8
NEB-204ENST00000409198 DCPSQ96C86 337 aaKnown RBP3.81□□□□□ -1.8
NEB-204ENST00000409198 SYNJ2O15056 1496 aa3.81□□□□□ -1.8
NEB-204ENST00000409198 FAM95CA0A1B0GW59 222 aa3.81□□□□□ -1.8
NEB-204ENST00000409198 H0YIN7 160 aa3.81□□□□□ -1.8
NEB-204ENST00000409198 OCM2P0CE71 109 aa3.81□□□□□ -1.8
NEB-204ENST00000409198 OCMP0CE72 109 aaPredicted RBP3.81□□□□□ -1.8
NEB-204ENST00000409198 P4HA1P13674 534 aa3.81□□□□□ -1.8
NEB-204ENST00000409198 GJC1P36383 396 aa3.81□□□□□ -1.8
NEB-204ENST00000409198 SUPT6HQ7KZ85 1726 aaKnown RBP3.81□□□□□ -1.8
NEB-204ENST00000409198 ZC3H6P61129 1189 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms