RNA–Protein interactions for RNA: ENST00000409036.5

RAPGEF4-204, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 5 BASIC

Gene RAPGEF4, Length 3,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-204ENST00000409036 A1BGP04217 495 aa7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 GJB2P29033 226 aa7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 EPHA10Q5JZY3 1008 aa7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 DNAJC10Q8IXB1 793 aa7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 KBTBD3Q8NAB2 608 aa7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 JARID2Q92833 1246 aaPredicted RBP7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 TTC14Q96N46 770 aa7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 ZSWIM6Q9HCJ5 1215 aa7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 CCDC87Q9NVE4 849 aa7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 CEP126Q9P2H0 1117 aa7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 NSFL1CQ9UNZ2 370 aaKnown RBP7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 SNX14Q9Y5W7 946 aa7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 PDE8AO60658 829 aa7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 LETM1O95202 739 aaPredicted RBP7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 DNM1Q05193 864 aaKnown RBP7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 TFCP2Q12800 502 aa7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 CCDC158Q5M9N0 1113 aa7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 FAM173BQ6P4H8 233 aa7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 BLOC1S2Q6QNY1 142 aa7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 ATG9AQ7Z3C6 839 aa7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 SPATA32Q96LK8 384 aa7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 DSCC1Q9BVC3 393 aa7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 NUP62CLQ9H1M0 184 aa7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.46□□□□□ -1.22
RAPGEF4-204ENST00000409036 IFIT5Q13325 482 aaKnown RBP7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 NECTIN1Q15223 517 aa7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 TTF1Q15361 905 aaPredicted RBP7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 CLEC4GQ6UXB4 293 aa7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 MTERF4Q7Z6M4 381 aaKnown RBP7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 HOMER1Q86YM7 354 aa7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 STK11IPQ8N1F8 1099 aa7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 C16orf45Q96MC5 204 aaPredicted RBP7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 TOMM22Q9NS69 142 aa7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 NUP98P52948 1817 aa7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 PTCD1O75127 700 aaKnown RBP7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 NOLC1Q14978 699 aaKnown RBP eCLIP7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 TAF7LQ5H9L4 462 aa7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 ZNF34Q8IZ26 560 aa7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 NOL7Q9UMY1 257 aaKnown RBP7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 MROH5Q6ZUA9 1318 aa7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 CNTNAP4Q9C0A0 1308 aa7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 ATRNO75882 1429 aa7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 ANKRD18BA2A2Z9 1011 aa7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 MCMDC2Q4G0Z9 681 aa7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 CCDC73Q6ZRK6 1079 aa7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 NLRP10Q86W26 655 aa7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 DBNLQ9UJU6 430 aaKnown RBP7.45□□□□□ -1.22
RAPGEF4-204ENST00000409036 ATP5J2-PTCD1G3V325 749 aa7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 UQCRFS1P1P0C7P4 283 aa7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 EIF5P55010 431 aaKnown RBP7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 ZNF445P59923 1031 aa7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 GUCY1B3Q02153 619 aa7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 ASAP1Q9ULH1 1129 aa7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 AK2P54819 239 aa7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 CTSWP56202 376 aa7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 NMIQ13287 307 aaPredicted RBP7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 MAP3K11Q16584 847 aa7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 RC3H1Q5TC82 1133 aaKnown RBP7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 RUFY3Q7L099 469 aa7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 PDCL2Q8N4E4 241 aa7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 ZBTB3Q9H5J0 574 aa7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 DDX60Q8IY21 1712 aaKnown RBP7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 ZSCAN22P10073 491 aaPredicted RBP7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 PDCP20941 246 aa7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 PPP4R3BQ5MIZ7 849 aa7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 FBXL16Q8N461 479 aa7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 CTNNA3Q9UI47 895 aa7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 WDR19Q8NEZ3 1342 aa7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 CPLX1O14810 134 aa7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 BRD1O95696 1058 aa7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 CREB3L3Q68CJ9 461 aa7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 DZIP3Q86Y13 1208 aaKnown RBP7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 FNBP4Q8N3X1 1017 aaPredicted RBP7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 RBM8AQ9Y5S9 174 aaKnown RBP7.44□□□□□ -1.22
RAPGEF4-204ENST00000409036 ZMYM6O95789 1325 aa7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 SYT1P21579 422 aa7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 ME1P48163 572 aa7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 LRRC2Q9BYS8 371 aa7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 PAG1Q9NWQ8 432 aa7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 TRMT1Q9NXH9 659 aaKnown RBP7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 RIC1Q4ADV7 1423 aa7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 APPP05067 770 aa7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 UBE2HP62256 183 aa7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 TPM4P67936 248 aa7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 ZMYM1Q5SVZ6 1142 aa7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 PPP1R9BQ96SB3 815 aa7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 CDC5LQ99459 802 aaKnown RBP7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 COL24A1Q17RW2 1714 aa7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 DYNC1I1O14576 645 aa7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 KINO60870 393 aaKnown RBP7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 SMC2O95347 1197 aa7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 WASHC4Q2M389 1173 aa7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 FAM177A1Q8N128 213 aaPredicted RBP7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 TMEM87AQ8NBN3 555 aa7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 CCDC112Q8NEF3 446 aa7.43□□□□□ -1.22
RAPGEF4-204ENST00000409036 SLC27A2O14975 620 aa7.42□□□□□ -1.22
RAPGEF4-204ENST00000409036 RNF113AO15541 343 aaKnown RBP7.42□□□□□ -1.22
RAPGEF4-204ENST00000409036 IFIT1P09914 478 aaKnown RBP7.42□□□□□ -1.22
RAPGEF4-204ENST00000409036 NT5C2P49902 561 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms