RNA–Protein interactions for RNA: ENST00000405755.6

PDE4D-207, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-207ENST00000405755 TRIM37O94972 964 aa11.33□□□□□ -0.6
PDE4D-207ENST00000405755 MCM4P33991 863 aa11.33□□□□□ -0.6
PDE4D-207ENST00000405755 PHKA1P46020 1223 aa11.33□□□□□ -0.6
PDE4D-207ENST00000405755 NUCB2P80303 420 aa11.33□□□□□ -0.6
PDE4D-207ENST00000405755 RUFY3Q7L099 469 aa11.33□□□□□ -0.6
PDE4D-207ENST00000405755 ANKRD18AQ8IVF6 992 aa11.33□□□□□ -0.6
PDE4D-207ENST00000405755 KCNB2Q92953 911 aa11.33□□□□□ -0.6
PDE4D-207ENST00000405755 TTC14Q96N46 770 aa11.33□□□□□ -0.6
PDE4D-207ENST00000405755 TM6SF1Q9BZW5 370 aa11.33□□□□□ -0.6
PDE4D-207ENST00000405755 U3KPZ7 1027 aaPredicted RBP11.33□□□□□ -0.6
PDE4D-207ENST00000405755 BRWD3Q6RI45 1802 aa11.33□□□□□ -0.6
PDE4D-207ENST00000405755 SNAP23O00161 211 aa11.33□□□□□ -0.6
PDE4D-207ENST00000405755 ZFYP08048 801 aaPredicted RBP11.33□□□□□ -0.6
PDE4D-207ENST00000405755 TPTE2Q6XPS3 522 aa11.33□□□□□ -0.6
PDE4D-207ENST00000405755 CCDC125Q86Z20 511 aa11.33□□□□□ -0.6
PDE4D-207ENST00000405755 LARP6Q9BRS8 491 aaKnown RBP11.33□□□□□ -0.6
PDE4D-207ENST00000405755 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.33□□□□□ -0.6
PDE4D-207ENST00000405755 ZSWIM6Q9HCJ5 1215 aa11.33□□□□□ -0.6
PDE4D-207ENST00000405755 LRRC4BQ9NT99 713 aa11.33□□□□□ -0.6
PDE4D-207ENST00000405755 C4AP0C0L4 1744 aa11.33□□□□□ -0.6
PDE4D-207ENST00000405755 MAST3O60307 1309 aa11.33□□□□□ -0.6
PDE4D-207ENST00000405755 UQCRFS1P1P0C7P4 283 aa11.32□□□□□ -0.6
PDE4D-207ENST00000405755 FGFR2P21802 821 aa11.32□□□□□ -0.6
PDE4D-207ENST00000405755 CHRNDQ07001 517 aa11.32□□□□□ -0.6
PDE4D-207ENST00000405755 TTF1Q15361 905 aaPredicted RBP11.32□□□□□ -0.6
PDE4D-207ENST00000405755 VPS53Q5VIR6 699 aa11.32□□□□□ -0.6
PDE4D-207ENST00000405755 BLOC1S2Q6QNY1 142 aa11.32□□□□□ -0.6
PDE4D-207ENST00000405755 C3orf67Q6ZVT6 689 aa11.32□□□□□ -0.6
PDE4D-207ENST00000405755 CCDC24Q8N4L8 307 aa11.32□□□□□ -0.6
PDE4D-207ENST00000405755 NLRP3Q96P20 1036 aa11.32□□□□□ -0.6
PDE4D-207ENST00000405755 LIMCH1Q9UPQ0 1083 aa11.32□□□□□ -0.6
PDE4D-207ENST00000405755 CASZ1Q86V15 1759 aa11.32□□□□□ -0.6
PDE4D-207ENST00000405755 DDX11L8A8MPP1 907 aa11.32□□□□□ -0.6
PDE4D-207ENST00000405755 M0R2C6 588 aa11.32□□□□□ -0.6
PDE4D-207ENST00000405755 IDH1O75874 414 aaKnown RBP11.32□□□□□ -0.6
PDE4D-207ENST00000405755 CUL4AQ13619 759 aa11.32□□□□□ -0.6
PDE4D-207ENST00000405755 SF3B3Q15393 1217 aaKnown RBP11.32□□□□□ -0.6
PDE4D-207ENST00000405755 ZNF512BQ96KM6 892 aaPredicted RBP11.32□□□□□ -0.6
PDE4D-207ENST00000405755 RPAP1Q9BWH6 1393 aaPredicted RBP11.31□□□□□ -0.6
PDE4D-207ENST00000405755 ARAP2Q8WZ64 1704 aa11.31□□□□□ -0.6
PDE4D-207ENST00000405755 ARID4AP29374 1257 aaPredicted RBP11.31□□□□□ -0.6
PDE4D-207ENST00000405755 KRT32Q14532 448 aa11.31□□□□□ -0.6
PDE4D-207ENST00000405755 OSBP2Q969R2 916 aa11.31□□□□□ -0.6
PDE4D-207ENST00000405755 INTS4Q96HW7 963 aaKnown RBP11.31□□□□□ -0.6
PDE4D-207ENST00000405755 TAF6LQ9Y6J9 622 aa11.31□□□□□ -0.6
PDE4D-207ENST00000405755 COL24A1Q17RW2 1714 aa11.31□□□□□ -0.6
PDE4D-207ENST00000405755 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.3□□□□□ -0.6
PDE4D-207ENST00000405755 CYP2E1P05181 493 aaPredicted RBP11.3□□□□□ -0.6
PDE4D-207ENST00000405755 PKP1Q13835 747 aa11.3□□□□□ -0.6
PDE4D-207ENST00000405755 ZSCAN25Q6NSZ9 544 aa11.3□□□□□ -0.6
PDE4D-207ENST00000405755 DSCC1Q9BVC3 393 aa11.3□□□□□ -0.6
PDE4D-207ENST00000405755 COL4A1P02462 1669 aa11.3□□□□□ -0.6
PDE4D-207ENST00000405755 MYH7P12883 1935 aa11.3□□□□□ -0.6
PDE4D-207ENST00000405755 AKAP11Q9UKA4 1901 aa11.3□□□□□ -0.6
PDE4D-207ENST00000405755 CYP21A2P08686 494 aa11.3□□□□□ -0.6
PDE4D-207ENST00000405755 HSPD1P10809 573 aaKnown RBP11.3□□□□□ -0.6
PDE4D-207ENST00000405755 SLC27A3Q5K4L6 730 aa11.3□□□□□ -0.6
PDE4D-207ENST00000405755 SLC10A5Q5PT55 438 aa11.3□□□□□ -0.6
PDE4D-207ENST00000405755 SLC9C2Q5TAH2 1124 aa11.3□□□□□ -0.6
PDE4D-207ENST00000405755 APPBP2Q92624 585 aa11.3□□□□□ -0.6
PDE4D-207ENST00000405755 TCEANC2Q96MN5 208 aa11.3□□□□□ -0.6
PDE4D-207ENST00000405755 TAF1P21675 1872 aa11.3□□□□□ -0.6
PDE4D-207ENST00000405755 ADRA2BP18089 450 aa11.29□□□□□ -0.6
PDE4D-207ENST00000405755 DEKP35659 375 aaKnown RBP11.29□□□□□ -0.6
PDE4D-207ENST00000405755 SPATA5Q8NB90 893 aa11.29□□□□□ -0.6
PDE4D-207ENST00000405755 CELF1Q92879 486 aaKnown RBP11.29□□□□□ -0.6
PDE4D-207ENST00000405755 BSDC1Q9NW68 430 aaPredicted RBP11.29□□□□□ -0.6
PDE4D-207ENST00000405755 CARMIL3Q8ND23 1372 aa11.29□□□□□ -0.6
PDE4D-207ENST00000405755 GOLGA6L22H0YM25 854 aa11.29□□□□□ -0.6
PDE4D-207ENST00000405755 RPS6KB1P23443 525 aa11.29□□□□□ -0.6
PDE4D-207ENST00000405755 BCAMP50895 628 aa11.29□□□□□ -0.6
PDE4D-207ENST00000405755 RASGRF1Q13972 1273 aa11.29□□□□□ -0.6
PDE4D-207ENST00000405755 TSGA10IPQ3SY00 556 aa11.29□□□□□ -0.6
PDE4D-207ENST00000405755 NEK1Q96PY6 1258 aa11.29□□□□□ -0.6
PDE4D-207ENST00000405755 PUS7LQ9H0K6 701 aaKnown RBP11.29□□□□□ -0.6
PDE4D-207ENST00000405755 PIH1D3Q9NQM4 214 aaKnown RBP11.29□□□□□ -0.6
PDE4D-207ENST00000405755 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.29□□□□□ -0.6
PDE4D-207ENST00000405755 ANKRD1Q15327 319 aa11.28□□□□□ -0.6
PDE4D-207ENST00000405755 FOXD4L5Q5VV16 416 aaPredicted RBP11.28□□□□□ -0.6
PDE4D-207ENST00000405755 CNBD1Q8NA66 436 aa11.28□□□□□ -0.6
PDE4D-207ENST00000405755 FOXD4L4Q8WXT5 416 aaPredicted RBP11.28□□□□□ -0.6
PDE4D-207ENST00000405755 ZSCAN31Q96LW9 406 aaPredicted RBP11.28□□□□□ -0.6
PDE4D-207ENST00000405755 GPAA1O43292 621 aa11.28□□□□□ -0.6
PDE4D-207ENST00000405755 LARGE1O95461 756 aa11.28□□□□□ -0.6
PDE4D-207ENST00000405755 ADD2P35612 726 aa11.28□□□□□ -0.6
PDE4D-207ENST00000405755 FGD1P98174 961 aa11.28□□□□□ -0.6
PDE4D-207ENST00000405755 COL9A3Q14050 684 aaPredicted RBP11.28□□□□□ -0.6
PDE4D-207ENST00000405755 GSE1Q14687 1217 aa11.28□□□□□ -0.6
PDE4D-207ENST00000405755 NFIXQ14938 502 aa11.28□□□□□ -0.6
PDE4D-207ENST00000405755 VPS37DQ86XT2 251 aa11.28□□□□□ -0.6
PDE4D-207ENST00000405755 CCDC83Q8IWF9 413 aa11.28□□□□□ -0.6
PDE4D-207ENST00000405755 SH2B1Q9NRF2 756 aaPredicted RBP11.28□□□□□ -0.6
PDE4D-207ENST00000405755 UBR3Q6ZT12 1888 aa11.27□□□□□ -0.6
PDE4D-207ENST00000405755 ZNF532Q9HCE3 1301 aa11.27□□□□□ -0.61
PDE4D-207ENST00000405755 RPS8P62241 208 aaKnown RBP11.27□□□□□ -0.61
PDE4D-207ENST00000405755 MAP3K12Q12852 859 aa11.27□□□□□ -0.61
PDE4D-207ENST00000405755 MINPP1Q9UNW1 487 aa11.27□□□□□ -0.61
PDE4D-207ENST00000405755 IQSEC3Q9UPP2 1182 aaPredicted RBP11.27□□□□□ -0.61
PDE4D-207ENST00000405755 SMC3Q9UQE7 1217 aa11.27□□□□□ -0.61
PDE4D-207ENST00000405755 MYO5AQ9Y4I1 1855 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms