RNA–Protein interactions for RNA: ENST00000405315.8

NUCB1-201, Transcript of nucleobindin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NUCB1, Length 2,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-201ENST00000405315 ZMYND15Q9H091 742 aa17.2■□□□□ 0.34
NUCB1-201ENST00000405315 NCOA5Q9HCD5 579 aaKnown RBP17.2■□□□□ 0.34
NUCB1-201ENST00000405315 CHAF1AQ13111 956 aaPredicted RBP17.2■□□□□ 0.34
NUCB1-201ENST00000405315 AGXT2Q9BYV1 514 aa17.2■□□□□ 0.34
NUCB1-201ENST00000405315 EYA2O00167 538 aa17.19■□□□□ 0.34
NUCB1-201ENST00000405315 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.19■□□□□ 0.34
NUCB1-201ENST00000405315 ZBTB3Q9H5J0 574 aa17.19■□□□□ 0.34
NUCB1-201ENST00000405315 TMEM94Q12767 1356 aa17.19■□□□□ 0.34
NUCB1-201ENST00000405315 RNF113AO15541 343 aaKnown RBP17.19■□□□□ 0.34
NUCB1-201ENST00000405315 CCAR1Q8IX12 1150 aaKnown RBP17.19■□□□□ 0.34
NUCB1-201ENST00000405315 NRBP1Q9UHY1 535 aa17.19■□□□□ 0.34
NUCB1-201ENST00000405315 A0A1B0GUL7 405 aa17.18■□□□□ 0.34
NUCB1-201ENST00000405315 PPFIA3O75145 1194 aa17.18■□□□□ 0.34
NUCB1-201ENST00000405315 LRMPQ12912 555 aa17.18■□□□□ 0.34
NUCB1-201ENST00000405315 ZNF710Q8N1W2 664 aa17.18■□□□□ 0.34
NUCB1-201ENST00000405315 RCOR1Q9UKL0 485 aa17.18■□□□□ 0.34
NUCB1-201ENST00000405315 SALL1Q9NSC2 1324 aa17.18■□□□□ 0.34
NUCB1-201ENST00000405315 M0R2C6 588 aa17.18■□□□□ 0.34
NUCB1-201ENST00000405315 A1BGP04217 495 aa17.18■□□□□ 0.34
NUCB1-201ENST00000405315 CHST3Q7LGC8 479 aa17.18■□□□□ 0.34
NUCB1-201ENST00000405315 USP28Q96RU2 1077 aa17.18■□□□□ 0.34
NUCB1-201ENST00000405315 GOLPH3LQ9H4A5 285 aa17.18■□□□□ 0.34
NUCB1-201ENST00000405315 FAM177BA6PVY3 158 aa17.17■□□□□ 0.34
NUCB1-201ENST00000405315 CAVIN2O95810 425 aa17.17■□□□□ 0.34
NUCB1-201ENST00000405315 GUCY1B3Q02153 619 aa17.17■□□□□ 0.34
NUCB1-201ENST00000405315 TICAM2Q86XR7 235 aa17.17■□□□□ 0.34
NUCB1-201ENST00000405315 KCPQ6ZWJ8 1503 aa17.17■□□□□ 0.34
NUCB1-201ENST00000405315 PAPPAQ13219 1627 aa17.17■□□□□ 0.34
NUCB1-201ENST00000405315 CCDC73Q6ZRK6 1079 aa17.17■□□□□ 0.34
NUCB1-201ENST00000405315 C11orf57Q6ZUT1 292 aaPredicted RBP17.17■□□□□ 0.34
NUCB1-201ENST00000405315 CCDC191Q8NCU4 936 aa17.17■□□□□ 0.34
NUCB1-201ENST00000405315 ZNF396Q96N95 335 aaPredicted RBP17.17■□□□□ 0.34
NUCB1-201ENST00000405315 CLIP2Q9UDT6 1046 aa17.17■□□□□ 0.34
NUCB1-201ENST00000405315 STRCP1A6NGW2 1772 aa17.17■□□□□ 0.34
NUCB1-201ENST00000405315 DCCP43146 1447 aa17.17■□□□□ 0.34
NUCB1-201ENST00000405315 CTAGE5O15320 804 aa17.16■□□□□ 0.34
NUCB1-201ENST00000405315 PDIA3P30101 505 aaKnown RBP17.16■□□□□ 0.34
NUCB1-201ENST00000405315 STX1AQ16623 288 aa17.16■□□□□ 0.34
NUCB1-201ENST00000405315 ZSCAN25Q6NSZ9 544 aa17.16■□□□□ 0.34
NUCB1-201ENST00000405315 PUS3Q9BZE2 481 aaKnown RBP17.16■□□□□ 0.34
NUCB1-201ENST00000405315 PCDH11XQ9BZA7 1347 aa17.16■□□□□ 0.34
NUCB1-201ENST00000405315 PCDH11YQ9BZA8 1340 aa17.16■□□□□ 0.34
NUCB1-201ENST00000405315 NWD2Q9ULI1 1742 aa17.16■□□□□ 0.34
NUCB1-201ENST00000405315 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.16■□□□□ 0.34
NUCB1-201ENST00000405315 GOLGA6L19H0YKK7 550 aa17.16■□□□□ 0.34
NUCB1-201ENST00000405315 RIOK3O14730 519 aaKnown RBP17.16■□□□□ 0.34
NUCB1-201ENST00000405315 CIAO1O76071 339 aa17.16■□□□□ 0.34
NUCB1-201ENST00000405315 TTLL5Q6EMB2 1281 aa17.16■□□□□ 0.34
NUCB1-201ENST00000405315 ZNF274Q96GC6 653 aaPredicted RBP17.16■□□□□ 0.34
NUCB1-201ENST00000405315 CPDO75976 1380 aa17.16■□□□□ 0.34
NUCB1-201ENST00000405315 CARMIL3Q8ND23 1372 aa17.16■□□□□ 0.34
NUCB1-201ENST00000405315 IQCB1Q15051 598 aa17.15■□□□□ 0.34
NUCB1-201ENST00000405315 ATL3Q6DD88 541 aa17.15■□□□□ 0.34
NUCB1-201ENST00000405315 KINO60870 393 aaKnown RBP17.14■□□□□ 0.34
NUCB1-201ENST00000405315 FKBP4Q02790 459 aaKnown RBP eCLIP17.14■□□□□ 0.34
NUCB1-201ENST00000405315 OSBP2Q969R2 916 aa17.14■□□□□ 0.34
NUCB1-201ENST00000405315 BCL2L12Q9HB09 334 aa17.14■□□□□ 0.34
NUCB1-201ENST00000405315 SPATA31A3Q5VYP0 1347 aa17.14■□□□□ 0.34
NUCB1-201ENST00000405315 CDC25BP30305 580 aa17.14■□□□□ 0.33
NUCB1-201ENST00000405315 ME1P48163 572 aa17.14■□□□□ 0.33
NUCB1-201ENST00000405315 SNW1Q13573 536 aaKnown RBP17.14■□□□□ 0.33
NUCB1-201ENST00000405315 ILDR1Q86SU0 546 aaPredicted RBP17.14■□□□□ 0.33
NUCB1-201ENST00000405315 FSIP1Q8NA03 581 aa17.14■□□□□ 0.33
NUCB1-201ENST00000405315 ZCRB1Q8TBF4 217 aaKnown RBP17.14■□□□□ 0.33
NUCB1-201ENST00000405315 CEP126Q9P2H0 1117 aa17.14■□□□□ 0.33
NUCB1-201ENST00000405315 FAM160A1Q05DH4 1040 aa17.14■□□□□ 0.33
NUCB1-201ENST00000405315 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.14■□□□□ 0.33
NUCB1-201ENST00000405315 ATG3Q9NT62 314 aa17.14■□□□□ 0.33
NUCB1-201ENST00000405315 CCDC144BQ3MJ40 725 aa17.13■□□□□ 0.33
NUCB1-201ENST00000405315 TTC39AQ5SRH9 613 aa17.13■□□□□ 0.33
NUCB1-201ENST00000405315 CCDC144CPQ8IYA2 1237 aa17.13■□□□□ 0.33
NUCB1-201ENST00000405315 CCDC94Q9BW85 323 aaPredicted RBP17.13■□□□□ 0.33
NUCB1-201ENST00000405315 HAND2P61296 217 aa17.13■□□□□ 0.33
NUCB1-201ENST00000405315 GORABQ5T7V8 394 aa17.13■□□□□ 0.33
NUCB1-201ENST00000405315 SARM1Q6SZW1 724 aa17.13■□□□□ 0.33
NUCB1-201ENST00000405315 CHMP4CQ96CF2 233 aa17.13■□□□□ 0.33
NUCB1-201ENST00000405315 C16orf45Q96MC5 204 aaPredicted RBP17.13■□□□□ 0.33
NUCB1-201ENST00000405315 GPHNQ9NQX3 736 aaPredicted RBP17.13■□□□□ 0.33
NUCB1-201ENST00000405315 MYH7P12883 1935 aa17.12■□□□□ 0.33
NUCB1-201ENST00000405315 ERVV-2B6SEH9 535 aa17.12■□□□□ 0.33
NUCB1-201ENST00000405315 ADORA1P30542 326 aa17.12■□□□□ 0.33
NUCB1-201ENST00000405315 WASHC4Q2M389 1173 aa17.12■□□□□ 0.33
NUCB1-201ENST00000405315 ENGASEQ8NFI3 743 aa17.12■□□□□ 0.33
NUCB1-201ENST00000405315 CACTINQ8WUQ7 758 aaKnown RBP17.12■□□□□ 0.33
NUCB1-201ENST00000405315 A0A087WWV3 80 aa17.12■□□□□ 0.33
NUCB1-201ENST00000405315 FDPSP14324 419 aaKnown RBP17.12■□□□□ 0.33
NUCB1-201ENST00000405315 CCDC57Q2TAC2 916 aa17.12■□□□□ 0.33
NUCB1-201ENST00000405315 LRRFIP1Q32MZ4 808 aaKnown RBP17.12■□□□□ 0.33
NUCB1-201ENST00000405315 CCDC158Q5M9N0 1113 aa17.12■□□□□ 0.33
NUCB1-201ENST00000405315 TOM1L2Q6ZVM7 507 aa17.12■□□□□ 0.33
NUCB1-201ENST00000405315 CTNNA3Q9UI47 895 aa17.12■□□□□ 0.33
NUCB1-201ENST00000405315 DDX60Q8IY21 1712 aaKnown RBP17.11■□□□□ 0.33
NUCB1-201ENST00000405315 WDR17Q8IZU2 1322 aa17.11■□□□□ 0.33
NUCB1-201ENST00000405315 BECN2A8MW95 431 aa17.11■□□□□ 0.33
NUCB1-201ENST00000405315 IMMTQ16891 758 aaKnown RBP17.11■□□□□ 0.33
NUCB1-201ENST00000405315 CADPS2Q86UW7 1296 aa17.11■□□□□ 0.33
NUCB1-201ENST00000405315 XAGE2Q96GT9 111 aa17.11■□□□□ 0.33
NUCB1-201ENST00000405315 ANO10Q9NW15 660 aa17.11■□□□□ 0.33
NUCB1-201ENST00000405315 FOXP2O15409 715 aa17.1■□□□□ 0.33
NUCB1-201ENST00000405315 HSP90AB3PQ58FF7 597 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms