RNA–Protein interactions for RNA: ENST00000405262.6

TNFSF11-204, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-204ENST00000405262 USP8P40818 1118 aa11.35□□□□□ -0.59
TNFSF11-204ENST00000405262 EVCP57679 992 aa11.35□□□□□ -0.59
TNFSF11-204ENST00000405262 KRT27Q7Z3Y8 459 aa11.35□□□□□ -0.59
TNFSF11-204ENST00000405262 CCDC125Q86Z20 511 aa11.35□□□□□ -0.59
TNFSF11-204ENST00000405262 USP16Q9Y5T5 823 aa11.35□□□□□ -0.59
TNFSF11-204ENST00000405262 A0A087WUV0 522 aaPredicted RBP11.35□□□□□ -0.59
TNFSF11-204ENST00000405262 APBB1O00213 710 aa11.35□□□□□ -0.59
TNFSF11-204ENST00000405262 SGSM2O43147 1006 aa11.35□□□□□ -0.59
TNFSF11-204ENST00000405262 FCHSD1Q86WN1 690 aa11.35□□□□□ -0.59
TNFSF11-204ENST00000405262 C8orf58Q8NAV2 365 aa11.35□□□□□ -0.59
TNFSF11-204ENST00000405262 LEO1Q8WVC0 666 aaPredicted RBP11.35□□□□□ -0.59
TNFSF11-204ENST00000405262 HNRNPLLQ8WVV9 542 aaKnown RBP11.35□□□□□ -0.59
TNFSF11-204ENST00000405262 RILPL2Q969X0 211 aa11.35□□□□□ -0.59
TNFSF11-204ENST00000405262 MPHOSPH8Q99549 860 aa11.35□□□□□ -0.59
TNFSF11-204ENST00000405262 ANO10Q9NW15 660 aa11.35□□□□□ -0.59
TNFSF11-204ENST00000405262 THSD7AQ9UPZ6 1657 aa11.34□□□□□ -0.59
TNFSF11-204ENST00000405262 CAMTA1Q9Y6Y1 1673 aa11.34□□□□□ -0.59
TNFSF11-204ENST00000405262 EIF3JO75822 258 aaKnown RBP11.34□□□□□ -0.59
TNFSF11-204ENST00000405262 MAP2K2P36507 400 aa11.34□□□□□ -0.59
TNFSF11-204ENST00000405262 TUBB4BP68371 445 aa11.34□□□□□ -0.59
TNFSF11-204ENST00000405262 CCDC83Q8IWF9 413 aa11.34□□□□□ -0.59
TNFSF11-204ENST00000405262 ANKRD20A12PQ8NF67 263 aa11.34□□□□□ -0.59
TNFSF11-204ENST00000405262 UTP14AQ9BVJ6 771 aaKnown RBP11.34□□□□□ -0.59
TNFSF11-204ENST00000405262 NAT10Q9H0A0 1025 aaKnown RBP11.34□□□□□ -0.59
TNFSF11-204ENST00000405262 STRN4Q9NRL3 753 aa11.34□□□□□ -0.59
TNFSF11-204ENST00000405262 A0A1W2PP64 1363 aa11.34□□□□□ -0.59
TNFSF11-204ENST00000405262 LMO7Q8WWI1 1683 aa11.34□□□□□ -0.59
TNFSF11-204ENST00000405262 PRR29P0C7W0 189 aa11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 SFPQP23246 707 aaKnown RBP eCLIP11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 EIF5P55010 431 aaKnown RBP11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 LARP1BQ659C4 914 aaKnown RBP11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 RSRC2Q7L4I2 434 aaKnown RBP11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 DEFB132Q7Z7B7 95 aa11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 HOMER1Q86YM7 354 aa11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 MEIS3Q99687 375 aa11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 LSG1Q9H089 658 aaKnown RBP11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 PIK3C2AO00443 1686 aa11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 POTEB2H3BUK9 544 aa11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 SRGAP3O43295 1099 aa11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 NR1I2O75469 434 aa11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 GNAI3P08754 354 aa11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 FAM182BQ5T319 152 aa11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 TADA2BQ86TJ2 420 aa11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 DHX40Q8IX18 779 aaKnown RBP11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 CEP57L1Q8IYX8 460 aa11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 KCNB2Q92953 911 aa11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 SUFUQ9UMX1 484 aa11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 SPATA31A1Q5TZJ5 1347 aa11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 CPDO75976 1380 aa11.33□□□□□ -0.6
TNFSF11-204ENST00000405262 GOLGA6L9A6NEM1 432 aa11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 GCP02774 474 aa11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 CCT4P50991 539 aaKnown RBP11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 TRIM65Q6PJ69 517 aa11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 BICD2Q8TD16 824 aa11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 BPIFA3Q9BQP9 254 aa11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 CARD6Q9BX69 1037 aa11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 PDRG1Q9NUG6 133 aa11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 PARP3Q9Y6F1 533 aa11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 AKAP12Q02952 1782 aa11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 H3BQF6 201 aa11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 ELL2O00472 640 aaPredicted RBP11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 APOBRQ0VD83 1088 aa11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 SART3Q15020 963 aaKnown RBP11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 LONRF2Q1L5Z9 754 aa11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 C11orf57Q6ZUT1 292 aaPredicted RBP11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 NBPF11Q86T75 865 aa11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 ERC1Q8IUD2 1116 aa11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 DHX37Q8IY37 1157 aaKnown RBP11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 CCDC34Q96HJ3 373 aa11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 ZSWIM6Q9HCJ5 1215 aa11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 KCNG1Q9UIX4 513 aa11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 CHMP3Q9Y3E7 222 aa11.32□□□□□ -0.6
TNFSF11-204ENST00000405262 FYB1O15117 783 aa11.31□□□□□ -0.6
TNFSF11-204ENST00000405262 ZSCAN12O43309 604 aa11.31□□□□□ -0.6
TNFSF11-204ENST00000405262 PPFIA4O75335 1185 aa11.31□□□□□ -0.6
TNFSF11-204ENST00000405262 URI1O94763 535 aaPredicted RBP11.31□□□□□ -0.6
TNFSF11-204ENST00000405262 LARGE1O95461 756 aa11.31□□□□□ -0.6
TNFSF11-204ENST00000405262 NLRP6P59044 892 aa11.31□□□□□ -0.6
TNFSF11-204ENST00000405262 MAP3K9P80192 1104 aa11.31□□□□□ -0.6
TNFSF11-204ENST00000405262 HSP90AB3PQ58FF7 597 aa11.31□□□□□ -0.6
TNFSF11-204ENST00000405262 HDXQ7Z353 690 aa11.31□□□□□ -0.6
TNFSF11-204ENST00000405262 CNKSR2Q8WXI2 1034 aa11.31□□□□□ -0.6
TNFSF11-204ENST00000405262 GOLGA1Q92805 767 aa11.31□□□□□ -0.6
TNFSF11-204ENST00000405262 CYP46A1Q9Y6A2 500 aa11.31□□□□□ -0.6
TNFSF11-204ENST00000405262 SLIT3O75094 1523 aa11.31□□□□□ -0.6
TNFSF11-204ENST00000405262 CD163L1Q9NR16 1453 aa11.31□□□□□ -0.6
TNFSF11-204ENST00000405262 KIF20BQ96Q89 1820 aa11.31□□□□□ -0.6
TNFSF11-204ENST00000405262 GNAI2P04899 355 aa11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 CALRP27797 417 aaKnown RBP11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 TXLNAP40222 546 aa11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 USP5P45974 858 aa11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 TDO2P48775 406 aa11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 GORABQ5T7V8 394 aa11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 ARMCX5Q6P1M9 558 aa11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 LARP1Q6PKG0 1096 aaKnown RBP11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 CDC37L1Q7L3B6 337 aa11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 STAG1Q8WVM7 1258 aa11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 PARD6BQ9BYG5 372 aa11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 GGNBP2Q9H3C7 697 aa11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 A1CFQ9NQ94 594 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms