RNA–Protein interactions for RNA: ENST00000398594.3

PCDHGB7-201, Transcript of protocadherin gamma subfamily B, 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB7, Length 4,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB7-201ENST00000398594 SFPQP23246 707 aaKnown RBP eCLIP16.52■□□□□ 0.23
PCDHGB7-201ENST00000398594 APOBRQ0VD83 1088 aa16.52■□□□□ 0.23
PCDHGB7-201ENST00000398594 ZNF397Q8NF99 534 aaPredicted RBP16.52■□□□□ 0.23
PCDHGB7-201ENST00000398594 TRPC5Q9UL62 973 aaPredicted RBP16.52■□□□□ 0.23
PCDHGB7-201ENST00000398594 MLH3Q9UHC1 1453 aa16.52■□□□□ 0.23
PCDHGB7-201ENST00000398594 CTAGE5O15320 804 aa16.51■□□□□ 0.23
PCDHGB7-201ENST00000398594 CCDC129Q6ZRS4 1044 aa16.51■□□□□ 0.23
PCDHGB7-201ENST00000398594 ZSCAN16Q9H4T2 348 aaPredicted RBP16.51■□□□□ 0.23
PCDHGB7-201ENST00000398594 INSRP06213 1382 aa16.51■□□□□ 0.23
PCDHGB7-201ENST00000398594 RPS8P62241 208 aaKnown RBP16.51■□□□□ 0.23
PCDHGB7-201ENST00000398594 CPLX3Q8WVH0 158 aa16.51■□□□□ 0.23
PCDHGB7-201ENST00000398594 RAB3GAP1Q15042 981 aa16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 ASAP1Q9ULH1 1129 aa16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 UGGT1Q9NYU2 1555 aa16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 PRDM1O75626 825 aa16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 MTIF2P46199 727 aaKnown RBP16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 TNNI2P48788 182 aa16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 DHX32Q7L7V1 743 aaKnown RBP16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 SYCP3Q8IZU3 236 aa16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 MPHOSPH6Q99547 160 aaKnown RBP16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 MYO5CQ9NQX4 1742 aa16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 LOC102724428A0A0B4J2F2 783 aa16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 PATL2C9JE40 543 aaKnown RBP16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 ZSCAN22P10073 491 aaPredicted RBP16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 SIK1P57059 783 aa16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 TEX35Q5T0J7 233 aa16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 ARMT1Q9H993 441 aa16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 ZNF408Q9H9D4 720 aa16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 MAGI2Q86UL8 1455 aa16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 FGFR1OPO95684 399 aaKnown RBP16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 POTEJP0CG39 1038 aa16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 LPIN2Q92539 896 aa16.5■□□□□ 0.23
PCDHGB7-201ENST00000398594 TRIM21P19474 475 aaKnown RBP16.49■□□□□ 0.23
PCDHGB7-201ENST00000398594 ARHGEF5Q12774 1597 aa16.49■□□□□ 0.23
PCDHGB7-201ENST00000398594 PRKCSHP14314 528 aaPredicted RBP16.49■□□□□ 0.23
PCDHGB7-201ENST00000398594 MARCKSP29966 332 aaPredicted RBP16.49■□□□□ 0.23
PCDHGB7-201ENST00000398594 CCDC40Q4G0X9 1142 aa16.49■□□□□ 0.23
PCDHGB7-201ENST00000398594 CPA1P15085 419 aa16.49■□□□□ 0.23
PCDHGB7-201ENST00000398594 DESP17661 470 aa16.49■□□□□ 0.23
PCDHGB7-201ENST00000398594 CARD10Q9BWT7 1032 aa16.49■□□□□ 0.23
PCDHGB7-201ENST00000398594 NEURL1BA8MQ27 555 aa16.48■□□□□ 0.23
PCDHGB7-201ENST00000398594 ERMNQ8TAM6 284 aa16.48■□□□□ 0.23
PCDHGB7-201ENST00000398594 WDR66Q8TBY9 1149 aa16.48■□□□□ 0.23
PCDHGB7-201ENST00000398594 SPDYE3A6NKU9 549 aa16.48■□□□□ 0.23
PCDHGB7-201ENST00000398594 TOP1P11387 765 aaKnown RBP16.48■□□□□ 0.23
PCDHGB7-201ENST00000398594 SYKP43405 635 aa16.48■□□□□ 0.23
PCDHGB7-201ENST00000398594 AK2P54819 239 aa16.48■□□□□ 0.23
PCDHGB7-201ENST00000398594 TBCAO75347 108 aaKnown RBP16.48■□□□□ 0.23
PCDHGB7-201ENST00000398594 CALM1P0DP23 149 aa16.48■□□□□ 0.23
PCDHGB7-201ENST00000398594 CALM2P0DP24 149 aa16.48■□□□□ 0.23
PCDHGB7-201ENST00000398594 CALM3P0DP25 149 aa16.48■□□□□ 0.23
PCDHGB7-201ENST00000398594 AFMP43652 599 aa16.48■□□□□ 0.23
PCDHGB7-201ENST00000398594 EIF6P56537 245 aaKnown RBP16.48■□□□□ 0.23
PCDHGB7-201ENST00000398594 CCDC112Q8NEF3 446 aa16.48■□□□□ 0.23
PCDHGB7-201ENST00000398594 C6orf50Q9HD87 102 aa16.48■□□□□ 0.23
PCDHGB7-201ENST00000398594 TRIM37O94972 964 aa16.47■□□□□ 0.23
PCDHGB7-201ENST00000398594 USP8P40818 1118 aa16.47■□□□□ 0.23
PCDHGB7-201ENST00000398594 KCNQ4P56696 695 aa16.47■□□□□ 0.23
PCDHGB7-201ENST00000398594 ERCC4Q92889 916 aaPredicted RBP16.47■□□□□ 0.23
PCDHGB7-201ENST00000398594 VTI1AQ96AJ9 217 aa16.47■□□□□ 0.23
PCDHGB7-201ENST00000398594 PRR36Q9H6K5 1346 aa16.47■□□□□ 0.23
PCDHGB7-201ENST00000398594 B4E1Z4 1266 aa16.47■□□□□ 0.23
PCDHGB7-201ENST00000398594 TDRD12Q587J7 1177 aaKnown RBP16.47■□□□□ 0.23
PCDHGB7-201ENST00000398594 RRP36Q96EU6 259 aaKnown RBP16.47■□□□□ 0.23
PCDHGB7-201ENST00000398594 NLRP1Q9C000 1473 aa16.47■□□□□ 0.23
PCDHGB7-201ENST00000398594 ZNF165P49910 485 aa16.47■□□□□ 0.23
PCDHGB7-201ENST00000398594 SPA17Q15506 151 aa16.47■□□□□ 0.23
PCDHGB7-201ENST00000398594 AATFQ9NY61 560 aaKnown RBP eCLIP16.47■□□□□ 0.23
PCDHGB7-201ENST00000398594 TRIM75PA6NK02 468 aa16.47■□□□□ 0.23
PCDHGB7-201ENST00000398594 CETN1Q12798 172 aa16.46■□□□□ 0.23
PCDHGB7-201ENST00000398594 APPBP2Q92624 585 aa16.46■□□□□ 0.23
PCDHGB7-201ENST00000398594 USP25Q9UHP3 1055 aa16.46■□□□□ 0.23
PCDHGB7-201ENST00000398594 BCS1LQ9Y276 419 aa16.46■□□□□ 0.23
PCDHGB7-201ENST00000398594 GPAA1O43292 621 aa16.46■□□□□ 0.23
PCDHGB7-201ENST00000398594 UBE2HP62256 183 aa16.46■□□□□ 0.23
PCDHGB7-201ENST00000398594 TAF4BQ92750 862 aa16.46■□□□□ 0.23
PCDHGB7-201ENST00000398594 SAMD9LQ8IVG5 1584 aa16.46■□□□□ 0.23
PCDHGB7-201ENST00000398594 BMP15O95972 392 aa16.46■□□□□ 0.23
PCDHGB7-201ENST00000398594 CALML3P27482 149 aa16.46■□□□□ 0.23
PCDHGB7-201ENST00000398594 PRKG1Q13976 671 aa16.46■□□□□ 0.23
PCDHGB7-201ENST00000398594 STXBP4Q6ZWJ1 553 aa16.46■□□□□ 0.23
PCDHGB7-201ENST00000398594 VPS36Q86VN1 386 aa16.46■□□□□ 0.23
PCDHGB7-201ENST00000398594 RBM27Q9P2N5 1060 aaKnown RBP16.46■□□□□ 0.23
PCDHGB7-201ENST00000398594 ZNF771Q7L3S4 317 aaPredicted RBP16.46■□□□□ 0.22
PCDHGB7-201ENST00000398594 HELLSQ9NRZ9 838 aa16.46■□□□□ 0.22
PCDHGB7-201ENST00000398594 RAD50Q92878 1312 aa16.45■□□□□ 0.22
PCDHGB7-201ENST00000398594 ERLIN2O94905 339 aa16.45■□□□□ 0.22
PCDHGB7-201ENST00000398594 FAM227BQ96M60 508 aa16.45■□□□□ 0.22
PCDHGB7-201ENST00000398594 TCP10Q12799 353 aa16.45■□□□□ 0.22
PCDHGB7-201ENST00000398594 TMEM87AQ8NBN3 555 aa16.45■□□□□ 0.22
PCDHGB7-201ENST00000398594 USP44Q9H0E7 712 aa16.45■□□□□ 0.22
PCDHGB7-201ENST00000398594 PPIP5K2O43314 1243 aa16.45■□□□□ 0.22
PCDHGB7-201ENST00000398594 NEBLO76041 1014 aa16.45■□□□□ 0.22
PCDHGB7-201ENST00000398594 ZYXQ15942 572 aaKnown RBP16.45■□□□□ 0.22
PCDHGB7-201ENST00000398594 KANK3Q6NY19 840 aa16.45■□□□□ 0.22
PCDHGB7-201ENST00000398594 RTL9Q8NET4 1388 aa16.45■□□□□ 0.22
PCDHGB7-201ENST00000398594 NEFHP12036 1026 aa16.45■□□□□ 0.22
PCDHGB7-201ENST00000398594 ZAP70P43403 619 aa16.45■□□□□ 0.22
PCDHGB7-201ENST00000398594 USPL1Q5W0Q7 1092 aa16.45■□□□□ 0.22
PCDHGB7-201ENST00000398594 BICD1Q96G01 975 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms