RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 GJC1P36383 396 aa13.38□□□□□ -0.27
TMF1-201ENST00000398559 CABP5Q9NP86 173 aa13.38□□□□□ -0.27
TMF1-201ENST00000398559 CYP7A1P22680 504 aa13.38□□□□□ -0.27
TMF1-201ENST00000398559 GRIPAP1Q4V328 841 aa13.38□□□□□ -0.27
TMF1-201ENST00000398559 ANKRD13DQ6ZTN6 518 aa13.38□□□□□ -0.27
TMF1-201ENST00000398559 TTC16Q8NEE8 873 aa13.38□□□□□ -0.27
TMF1-201ENST00000398559 LMBR1Q8WVP7 490 aa13.38□□□□□ -0.27
TMF1-201ENST00000398559 IFT140Q96RY7 1462 aa13.38□□□□□ -0.27
TMF1-201ENST00000398559 ANKRD36BQ8N2N9 1353 aa13.37□□□□□ -0.27
TMF1-201ENST00000398559 PPM1FP49593 454 aaPredicted RBP13.37□□□□□ -0.27
TMF1-201ENST00000398559 SMC5Q8IY18 1101 aa13.37□□□□□ -0.27
TMF1-201ENST00000398559 CCDC42Q96M95 316 aa13.37□□□□□ -0.27
TMF1-201ENST00000398559 OGFRQ9NZT2 677 aa13.37□□□□□ -0.27
TMF1-201ENST00000398559 RALGAPBQ86X10 1494 aa13.37□□□□□ -0.27
TMF1-201ENST00000398559 ATP8B2P98198 1209 aa13.37□□□□□ -0.27
TMF1-201ENST00000398559 CHST3Q7LGC8 479 aa13.37□□□□□ -0.27
TMF1-201ENST00000398559 ANKRD24Q8TF21 1146 aa13.37□□□□□ -0.27
TMF1-201ENST00000398559 NOS1P29475 1434 aa13.37□□□□□ -0.27
TMF1-201ENST00000398559 ZBTB16Q05516 673 aa13.37□□□□□ -0.27
TMF1-201ENST00000398559 APBB1IPQ7Z5R6 666 aaPredicted RBP13.37□□□□□ -0.27
TMF1-201ENST00000398559 IFNL2Q8IZJ0 200 aa13.37□□□□□ -0.27
TMF1-201ENST00000398559 MAGI1Q96QZ7 1491 aaPredicted RBP13.37□□□□□ -0.27
TMF1-201ENST00000398559 POGZQ7Z3K3 1410 aa13.37□□□□□ -0.27
TMF1-201ENST00000398559 GTF3C6Q969F1 213 aa13.37□□□□□ -0.27
TMF1-201ENST00000398559 RPRD2Q5VT52 1461 aaKnown RBP13.37□□□□□ -0.27
TMF1-201ENST00000398559 MRC2Q9UBG0 1479 aa13.37□□□□□ -0.27
TMF1-201ENST00000398559 TOPBP1Q92547 1522 aa13.37□□□□□ -0.27
TMF1-201ENST00000398559 SNRPA1P09661 255 aaKnown RBP13.36□□□□□ -0.27
TMF1-201ENST00000398559 CPLX4Q7Z7G2 160 aa13.36□□□□□ -0.27
TMF1-201ENST00000398559 CCDC63Q8NA47 563 aa13.36□□□□□ -0.27
TMF1-201ENST00000398559 FOXO3O43524 673 aa13.36□□□□□ -0.27
TMF1-201ENST00000398559 FBLN1P23142 703 aa13.36□□□□□ -0.27
TMF1-201ENST00000398559 APOBRQ0VD83 1088 aa13.36□□□□□ -0.27
TMF1-201ENST00000398559 C10orf67Q8IYJ2 551 aa13.36□□□□□ -0.27
TMF1-201ENST00000398559 TTC14Q96N46 770 aa13.36□□□□□ -0.27
TMF1-201ENST00000398559 UTP14AQ9BVJ6 771 aaKnown RBP13.36□□□□□ -0.27
TMF1-201ENST00000398559 MYCNP04198 464 aaPredicted RBP13.36□□□□□ -0.27
TMF1-201ENST00000398559 GSTO1P78417 241 aa13.36□□□□□ -0.27
TMF1-201ENST00000398559 DAAM2Q86T65 1068 aa13.36□□□□□ -0.27
TMF1-201ENST00000398559 TEX13AQ9BXU3 409 aaPredicted RBP13.36□□□□□ -0.27
TMF1-201ENST00000398559 TUBB4BP68371 445 aa13.36□□□□□ -0.27
TMF1-201ENST00000398559 NEK11Q8NG66 645 aa13.36□□□□□ -0.27
TMF1-201ENST00000398559 TRIM75PA6NK02 468 aa13.36□□□□□ -0.27
TMF1-201ENST00000398559 NAPAP54920 295 aa13.36□□□□□ -0.27
TMF1-201ENST00000398559 CCDC114Q96M63 670 aa13.36□□□□□ -0.27
TMF1-201ENST00000398559 AMOTL2Q9Y2J4 779 aa13.36□□□□□ -0.27
TMF1-201ENST00000398559 KRT2P35908 639 aa13.35□□□□□ -0.27
TMF1-201ENST00000398559 TTLL12Q14166 644 aaPredicted RBP13.35□□□□□ -0.27
TMF1-201ENST00000398559 CCDC50Q8IVM0 306 aa13.35□□□□□ -0.27
TMF1-201ENST00000398559 SMC6Q96SB8 1091 aa13.35□□□□□ -0.27
TMF1-201ENST00000398559 NESP48681 1621 aa13.35□□□□□ -0.27
TMF1-201ENST00000398559 SBNO2Q9Y2G9 1366 aa13.35□□□□□ -0.27
TMF1-201ENST00000398559 EEF2P13639 858 aaKnown RBP13.35□□□□□ -0.27
TMF1-201ENST00000398559 HDXQ7Z353 690 aa13.35□□□□□ -0.27
TMF1-201ENST00000398559 DDX23Q9BUQ8 820 aaKnown RBP13.35□□□□□ -0.27
TMF1-201ENST00000398559 PABPN1LA6NDY0 278 aaKnown RBP13.35□□□□□ -0.27
TMF1-201ENST00000398559 CREB3L3Q68CJ9 461 aa13.35□□□□□ -0.27
TMF1-201ENST00000398559 FAM76AQ8TAV0 307 aa13.35□□□□□ -0.27
TMF1-201ENST00000398559 ASXL1Q8IXJ9 1541 aa13.35□□□□□ -0.27
TMF1-201ENST00000398559 C8orf58Q8NAV2 365 aa13.35□□□□□ -0.27
TMF1-201ENST00000398559 PAG1Q9NWQ8 432 aa13.35□□□□□ -0.27
TMF1-201ENST00000398559 TNNQ9UQP3 1299 aa13.35□□□□□ -0.27
TMF1-201ENST00000398559 BICDL2A1A5D9 508 aa13.34□□□□□ -0.27
TMF1-201ENST00000398559 RUFY3Q7L099 469 aa13.34□□□□□ -0.27
TMF1-201ENST00000398559 USP37Q86T82 979 aa13.34□□□□□ -0.27
TMF1-201ENST00000398559 PPP1R9BQ96SB3 815 aa13.34□□□□□ -0.27
TMF1-201ENST00000398559 PA2G4Q9UQ80 394 aaKnown RBP13.34□□□□□ -0.27
TMF1-201ENST00000398559 ATP2B3Q16720 1220 aa13.34□□□□□ -0.27
TMF1-201ENST00000398559 CCDC152Q4G0S7 254 aa13.34□□□□□ -0.27
TMF1-201ENST00000398559 GRM8O00222 908 aa13.34□□□□□ -0.27
TMF1-201ENST00000398559 IQSEC3Q9UPP2 1182 aaPredicted RBP13.34□□□□□ -0.27
TMF1-201ENST00000398559 ATP2A1O14983 1001 aa13.34□□□□□ -0.27
TMF1-201ENST00000398559 SLC9C2Q5TAH2 1124 aa13.34□□□□□ -0.27
TMF1-201ENST00000398559 KRBA2Q6ZNG9 492 aa13.34□□□□□ -0.27
TMF1-201ENST00000398559 XAGE3Q8WTP9 111 aa13.34□□□□□ -0.27
TMF1-201ENST00000398559 KCNK9Q9NPC2 374 aa13.34□□□□□ -0.27
TMF1-201ENST00000398559 TLDC2A0PJX2 215 aa13.34□□□□□ -0.27
TMF1-201ENST00000398559 PTPDC1A2A3K4 754 aa13.34□□□□□ -0.27
TMF1-201ENST00000398559 MCM7P33993 719 aa13.33□□□□□ -0.27
TMF1-201ENST00000398559 VAV2P52735 878 aa13.33□□□□□ -0.27
TMF1-201ENST00000398559 CCDC25Q86WR0 208 aa13.33□□□□□ -0.27
TMF1-201ENST00000398559 PPP2R3AQ06190 1150 aa13.33□□□□□ -0.28
TMF1-201ENST00000398559 CALM1P0DP23 149 aa13.33□□□□□ -0.28
TMF1-201ENST00000398559 CALM2P0DP24 149 aa13.33□□□□□ -0.28
TMF1-201ENST00000398559 CALM3P0DP25 149 aa13.33□□□□□ -0.28
TMF1-201ENST00000398559 ARL1P40616 181 aaPredicted RBP13.33□□□□□ -0.28
TMF1-201ENST00000398559 UBLCP1Q8WVY7 318 aaPredicted RBP13.33□□□□□ -0.28
TMF1-201ENST00000398559 IQGAP2Q13576 1575 aa13.33□□□□□ -0.28
TMF1-201ENST00000398559 GNAQP50148 359 aa13.33□□□□□ -0.28
TMF1-201ENST00000398559 BAG1Q99933 345 aaPredicted RBP13.33□□□□□ -0.28
TMF1-201ENST00000398559 TSGA10Q9BZW7 698 aa13.33□□□□□ -0.28
TMF1-201ENST00000398559 EVCP57679 992 aa13.33□□□□□ -0.28
TMF1-201ENST00000398559 SSX2IPQ9Y2D8 614 aa13.33□□□□□ -0.28
TMF1-201ENST00000398559 EXOC5O00471 708 aa13.33□□□□□ -0.28
TMF1-201ENST00000398559 SAMD15Q9P1V8 674 aa13.33□□□□□ -0.28
TMF1-201ENST00000398559 SEC24BO95487 1268 aa13.32□□□□□ -0.28
TMF1-201ENST00000398559 U2AF2P26368 475 aaKnown RBP eCLIP13.32□□□□□ -0.286e-7■■□□□ 13.3
TMF1-201ENST00000398559 HMGB2P26583 209 aaKnown RBP13.32□□□□□ -0.28
TMF1-201ENST00000398559 ADAMTS2O95450 1211 aa13.32□□□□□ -0.28
TMF1-201ENST00000398559 PLCB3Q01970 1234 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms