RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 PLVAPQ9BX97 442 aa12.78□□□□□ -0.36
RGPD2-201ENST00000398146 OATP04181 439 aa12.77□□□□□ -0.36
RGPD2-201ENST00000398146 DCPSQ96C86 337 aaKnown RBP12.77□□□□□ -0.36
RGPD2-201ENST00000398146 SH2D4AQ9H788 454 aa12.77□□□□□ -0.36
RGPD2-201ENST00000398146 NBPF7P0C2Y1 421 aaPredicted RBP12.77□□□□□ -0.36
RGPD2-201ENST00000398146 MICAL1Q8TDZ2 1067 aa12.77□□□□□ -0.36
RGPD2-201ENST00000398146 TRMT1Q9NXH9 659 aaKnown RBP12.77□□□□□ -0.36
RGPD2-201ENST00000398146 EMILIN1Q9Y6C2 1016 aa12.77□□□□□ -0.36
RGPD2-201ENST00000398146 NCKAP5LQ9HCH0 1330 aa12.77□□□□□ -0.36
RGPD2-201ENST00000398146 KAT6BQ8WYB5 2073 aa12.77□□□□□ -0.36
RGPD2-201ENST00000398146 KIF5AQ12840 1032 aa12.77□□□□□ -0.37
RGPD2-201ENST00000398146 EPSTI1Q96J88 318 aa12.77□□□□□ -0.37
RGPD2-201ENST00000398146 RIOK1Q9BRS2 568 aaKnown RBP12.77□□□□□ -0.37
RGPD2-201ENST00000398146 ANO10Q9NW15 660 aa12.77□□□□□ -0.37
RGPD2-201ENST00000398146 BTG4Q9NY30 223 aa12.77□□□□□ -0.37
RGPD2-201ENST00000398146 GOLGA6CA6NDK9 693 aa12.77□□□□□ -0.37
RGPD2-201ENST00000398146 GOLGA6BA6NDN3 693 aa12.77□□□□□ -0.37
RGPD2-201ENST00000398146 PPP1R12AO14974 1030 aaPredicted RBP12.77□□□□□ -0.37
RGPD2-201ENST00000398146 ZSCAN12O43309 604 aa12.77□□□□□ -0.37
RGPD2-201ENST00000398146 GOLGA6DP0CG33 693 aa12.77□□□□□ -0.37
RGPD2-201ENST00000398146 STRN3Q13033 797 aa12.77□□□□□ -0.37
RGPD2-201ENST00000398146 KIAA1524Q8TCG1 905 aa12.77□□□□□ -0.37
RGPD2-201ENST00000398146 TSHZ2Q9NRE2 1034 aa12.77□□□□□ -0.37
RGPD2-201ENST00000398146 GOLGA6AQ9NYA3 693 aa12.77□□□□□ -0.37
RGPD2-201ENST00000398146 CCDC6Q16204 474 aa12.77□□□□□ -0.37
RGPD2-201ENST00000398146 DCAF17Q5H9S7 520 aaPredicted RBP12.77□□□□□ -0.37
RGPD2-201ENST00000398146 CHMP6Q96FZ7 201 aa12.77□□□□□ -0.37
RGPD2-201ENST00000398146 TMEM57Q8N5G2 664 aa12.76□□□□□ -0.37
RGPD2-201ENST00000398146 MRRFQ96E11 262 aaKnown RBP12.76□□□□□ -0.37
RGPD2-201ENST00000398146 ANKFY1Q9P2R3 1169 aa12.76□□□□□ -0.37
RGPD2-201ENST00000398146 RNF216Q9NWF9 866 aaPredicted RBP12.76□□□□□ -0.37
RGPD2-201ENST00000398146 SLC5A4Q9NY91 659 aa12.76□□□□□ -0.37
RGPD2-201ENST00000398146 DPP8Q6V1X1 898 aaPredicted RBP12.76□□□□□ -0.37
RGPD2-201ENST00000398146 SESTD1Q86VW0 696 aa12.76□□□□□ -0.37
RGPD2-201ENST00000398146 GANCQ8TET4 914 aa12.76□□□□□ -0.37
RGPD2-201ENST00000398146 ARHGEF10LQ9HCE6 1279 aa12.76□□□□□ -0.37
RGPD2-201ENST00000398146 ORC3Q9UBD5 711 aaPredicted RBP12.76□□□□□ -0.37
RGPD2-201ENST00000398146 ESYT2A0FGR8 921 aa12.76□□□□□ -0.37
RGPD2-201ENST00000398146 CCDC155Q8N6L0 562 aa12.76□□□□□ -0.37
RGPD2-201ENST00000398146 ACRBPQ8NEB7 543 aa12.76□□□□□ -0.37
RGPD2-201ENST00000398146 ESR2Q92731 530 aa12.76□□□□□ -0.37
RGPD2-201ENST00000398146 ARHGEF6Q15052 776 aa12.76□□□□□ -0.37
RGPD2-201ENST00000398146 IFI16Q16666 785 aaKnown RBP12.76□□□□□ -0.37
RGPD2-201ENST00000398146 CLIP2Q9UDT6 1046 aa12.76□□□□□ -0.37
RGPD2-201ENST00000398146 USP21Q9UK80 565 aa12.76□□□□□ -0.37
RGPD2-201ENST00000398146 ATAD2Q6PL18 1390 aa12.76□□□□□ -0.37
RGPD2-201ENST00000398146 FAM170AA1A519 330 aa12.76□□□□□ -0.37
RGPD2-201ENST00000398146 WDR44Q5JSH3 913 aa12.76□□□□□ -0.37
RGPD2-201ENST00000398146 MAGEB6Q8N7X4 407 aa12.76□□□□□ -0.37
RGPD2-201ENST00000398146 LRRC2Q9BYS8 371 aa12.76□□□□□ -0.37
RGPD2-201ENST00000398146 PTGS1P23219 599 aa12.75□□□□□ -0.37
RGPD2-201ENST00000398146 Q3C1V9 767 aa12.75□□□□□ -0.37
RGPD2-201ENST00000398146 RPUSD2Q8IZ73 545 aaKnown RBP12.75□□□□□ -0.37
RGPD2-201ENST00000398146 TBC1D31Q96DN5 1066 aa12.75□□□□□ -0.37
RGPD2-201ENST00000398146 ITM2BQ9Y287 266 aa12.75□□□□□ -0.37
RGPD2-201ENST00000398146 WDR7Q9Y4E6 1490 aa12.75□□□□□ -0.37
RGPD2-201ENST00000398146 AKR1B10O60218 316 aa12.75□□□□□ -0.37
RGPD2-201ENST00000398146 ZBED4O75132 1171 aa12.75□□□□□ -0.37
RGPD2-201ENST00000398146 AAMPQ13685 434 aa12.75□□□□□ -0.37
RGPD2-201ENST00000398146 DIXDC1Q155Q3 683 aa12.75□□□□□ -0.37
RGPD2-201ENST00000398146 USH1GQ495M9 461 aa12.75□□□□□ -0.37
RGPD2-201ENST00000398146 SKA2Q8WVK7 121 aaPredicted RBP12.75□□□□□ -0.37
RGPD2-201ENST00000398146 ZBTB9Q96C00 473 aa12.75□□□□□ -0.37
RGPD2-201ENST00000398146 KRT23Q9C075 422 aa12.75□□□□□ -0.37
RGPD2-201ENST00000398146 PALM3A6NDB9 673 aaPredicted RBP12.75□□□□□ -0.37
RGPD2-201ENST00000398146 STX10O60499 249 aa12.75□□□□□ -0.37
RGPD2-201ENST00000398146 RTN1Q16799 776 aa12.75□□□□□ -0.37
RGPD2-201ENST00000398146 TFIP11Q9UBB9 837 aaKnown RBP12.75□□□□□ -0.37
RGPD2-201ENST00000398146 GNL1P36915 607 aaPredicted RBP12.74□□□□□ -0.37
RGPD2-201ENST00000398146 NSMFQ6X4W1 530 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 ANKRD13DQ6ZTN6 518 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 TMC6Q7Z403 805 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 ZSWIM4Q9H7M6 989 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 TSHZ3Q63HK5 1081 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 CCDC25Q86WR0 208 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 MKRN1Q9UHC7 482 aaKnown RBP12.74□□□□□ -0.37
RGPD2-201ENST00000398146 CD2APQ9Y5K6 639 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 SPDYE2BA6NHP3 402 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 SPDYE6P0CI01 402 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 NAP1L3Q99457 506 aaPredicted RBP12.74□□□□□ -0.37
RGPD2-201ENST00000398146 ZBED2Q9BTP6 218 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 GBP3Q9H0R5 595 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 LRFN2Q9ULH4 789 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 NSD3Q9BZ95 1437 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 PPIP5K2O43314 1243 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 ITKQ08881 620 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 CEP112Q8N8E3 955 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 IFT74Q96LB3 600 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 FAM204AQ9H8W3 233 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.74□□□□□ -0.37
RGPD2-201ENST00000398146 ATP6V0A2Q9Y487 856 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 MROH2BQ7Z745 1585 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 SYCE3A1L190 88 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 MCM7P33993 719 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 CCDC125Q86Z20 511 aa12.74□□□□□ -0.37
RGPD2-201ENST00000398146 TNPO1Q92973 898 aaKnown RBP12.74□□□□□ -0.37
RGPD2-201ENST00000398146 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.74□□□□□ -0.37
RGPD2-201ENST00000398146 GIPC1O14908 333 aa12.73□□□□□ -0.37
RGPD2-201ENST00000398146 CCT6AP40227 531 aaKnown RBP12.73□□□□□ -0.37
RGPD2-201ENST00000398146 DNM2P50570 870 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms