RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 GPTP24298 496 aa25.62■■□□□ 1.69
NFIX-203ENST00000397661 RABL6Q3YEC7 729 aaPredicted RBP25.62■■□□□ 1.69
NFIX-203ENST00000397661 CLIP2Q9UDT6 1046 aa25.62■■□□□ 1.69
NFIX-203ENST00000397661 NAA30Q147X3 362 aaPredicted RBP25.61■■□□□ 1.69
NFIX-203ENST00000397661 STK11IPQ8N1F8 1099 aa25.61■■□□□ 1.69
NFIX-203ENST00000397661 OSBP2Q969R2 916 aa25.61■■□□□ 1.69
NFIX-203ENST00000397661 PRDM11Q9NQV5 511 aa25.61■■□□□ 1.69
NFIX-203ENST00000397661 LMO7Q8WWI1 1683 aa25.61■■□□□ 1.69
NFIX-203ENST00000397661 CASP7P55210 303 aa25.61■■□□□ 1.69
NFIX-203ENST00000397661 ZBTB9Q96C00 473 aa25.61■■□□□ 1.69
NFIX-203ENST00000397661 ELP1O95163 1332 aa25.61■■□□□ 1.69
NFIX-203ENST00000397661 A0A1B0GVL5 298 aa25.6■■□□□ 1.69
NFIX-203ENST00000397661 BECN2A8MW95 431 aa25.6■■□□□ 1.69
NFIX-203ENST00000397661 BIN1O00499 593 aa25.6■■□□□ 1.69
NFIX-203ENST00000397661 CFAP45Q9UL16 551 aa25.6■■□□□ 1.69
NFIX-203ENST00000397661 MAST3O60307 1309 aa25.6■■□□□ 1.69
NFIX-203ENST00000397661 SCARF1Q14162 830 aa25.6■■□□□ 1.69
NFIX-203ENST00000397661 CCDC144BQ3MJ40 725 aa25.6■■□□□ 1.69
NFIX-203ENST00000397661 CCDC144CPQ8IYA2 1237 aa25.6■■□□□ 1.69
NFIX-203ENST00000397661 TSGA10IPQ3SY00 556 aa25.59■■□□□ 1.69
NFIX-203ENST00000397661 CEP126Q9P2H0 1117 aa25.59■■□□□ 1.69
NFIX-203ENST00000397661 DENND2AQ9ULE3 1009 aa25.59■■□□□ 1.69
NFIX-203ENST00000397661 FSIP1Q8NA03 581 aa25.59■■□□□ 1.69
NFIX-203ENST00000397661 GTF2F1P35269 517 aaKnown RBP eCLIP25.59■■□□□ 1.692e-6■■■■□ 23.4
NFIX-203ENST00000397661 TTC39AQ5SRH9 613 aa25.59■■□□□ 1.69
NFIX-203ENST00000397661 CCDC73Q6ZRK6 1079 aa25.59■■□□□ 1.69
NFIX-203ENST00000397661 C1orf167Q5SNV9 1468 aa25.58■■□□□ 1.69
NFIX-203ENST00000397661 ZNF75DP51815 510 aa25.58■■□□□ 1.69
NFIX-203ENST00000397661 SF3A1Q15459 793 aaKnown RBP25.58■■□□□ 1.69
NFIX-203ENST00000397661 CCDC57Q2TAC2 916 aa25.58■■□□□ 1.69
NFIX-203ENST00000397661 SDF4Q9BRK5 362 aa25.58■■□□□ 1.69
NFIX-203ENST00000397661 N4BP2Q86UW6 1770 aaPredicted RBP25.58■■□□□ 1.69
NFIX-203ENST00000397661 EYA2O00167 538 aa25.57■■□□□ 1.68
NFIX-203ENST00000397661 H7C1W4 665 aa25.57■■□□□ 1.68
NFIX-203ENST00000397661 PDIA3P30101 505 aaKnown RBP25.57■■□□□ 1.68
NFIX-203ENST00000397661 SYTL4Q96C24 671 aaPredicted RBP25.57■■□□□ 1.68
NFIX-203ENST00000397661 TRMT1Q9NXH9 659 aaKnown RBP25.57■■□□□ 1.68
NFIX-203ENST00000397661 CHD2O14647 1828 aaKnown RBP25.57■■□□□ 1.68
NFIX-203ENST00000397661 PFKFB2O60825 505 aa25.57■■□□□ 1.68
NFIX-203ENST00000397661 KINO60870 393 aaKnown RBP25.57■■□□□ 1.68
NFIX-203ENST00000397661 APPP05067 770 aa25.57■■□□□ 1.68
NFIX-203ENST00000397661 CACTINQ8WUQ7 758 aaKnown RBP25.57■■□□□ 1.68
NFIX-203ENST00000397661 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.57■■□□□ 1.68
NFIX-203ENST00000397661 V9GYY5 206 aaPredicted RBP25.57■■□□□ 1.68
NFIX-203ENST00000397661 RNF113AO15541 343 aaKnown RBP25.56■■□□□ 1.68
NFIX-203ENST00000397661 ZCRB1Q8TBF4 217 aaKnown RBP25.55■■□□□ 1.68
NFIX-203ENST00000397661 IL15P40933 162 aaPredicted RBP25.55■■□□□ 1.68
NFIX-203ENST00000397661 ZAP70P43403 619 aa25.55■■□□□ 1.68
NFIX-203ENST00000397661 ADD1P35611 737 aaKnown RBP25.54■■□□□ 1.68
NFIX-203ENST00000397661 HSPA2P54652 639 aa25.54■■□□□ 1.68
NFIX-203ENST00000397661 TPD52L1Q16890 204 aaPredicted RBP25.54■■□□□ 1.68
NFIX-203ENST00000397661 ZSCAN25Q6NSZ9 544 aa25.54■■□□□ 1.68
NFIX-203ENST00000397661 ZMYM1Q5SVZ6 1142 aa25.54■■□□□ 1.68
NFIX-203ENST00000397661 ZSCAN16Q9H4T2 348 aaPredicted RBP25.54■■□□□ 1.68
NFIX-203ENST00000397661 TMEM94Q12767 1356 aa25.54■■□□□ 1.68
NFIX-203ENST00000397661 XAGE2Q96GT9 111 aa25.54■■□□□ 1.68
NFIX-203ENST00000397661 PUS7LQ9H0K6 701 aaKnown RBP25.54■■□□□ 1.68
NFIX-203ENST00000397661 KLF18A0A0U1RQI7 1052 aa25.53■■□□□ 1.68
NFIX-203ENST00000397661 AIFM3Q96NN9 605 aa25.53■■□□□ 1.68
NFIX-203ENST00000397661 GOLGA8BA8MQT2 603 aa25.52■■□□□ 1.68
NFIX-203ENST00000397661 CPLX1O14810 134 aa25.52■■□□□ 1.68
NFIX-203ENST00000397661 CCDC158Q5M9N0 1113 aa25.52■■□□□ 1.68
NFIX-203ENST00000397661 CLIC4Q9Y696 253 aa25.52■■□□□ 1.68
NFIX-203ENST00000397661 CRYBG1Q9Y4K1 1723 aa25.52■■□□□ 1.68
NFIX-203ENST00000397661 AOPEPQ8N6M6 819 aa25.52■■□□□ 1.68
NFIX-203ENST00000397661 INCENPQ9NQS7 918 aa25.52■■□□□ 1.68
NFIX-203ENST00000397661 FGAP02671 866 aa25.52■■□□□ 1.68
NFIX-203ENST00000397661 C5P01031 1676 aa25.52■■□□□ 1.68
NFIX-203ENST00000397661 TNNT1P13805 278 aa25.51■■□□□ 1.67
NFIX-203ENST00000397661 MARCKSP29966 332 aaPredicted RBP25.51■■□□□ 1.67
NFIX-203ENST00000397661 PTPN21Q16825 1174 aa25.51■■□□□ 1.67
NFIX-203ENST00000397661 HELBQ8NG08 1087 aaPredicted RBP25.51■■□□□ 1.67
NFIX-203ENST00000397661 SMARCC2Q8TAQ2 1214 aa25.51■■□□□ 1.67
NFIX-203ENST00000397661 ALDH8A1Q9H2A2 487 aaPredicted RBP25.51■■□□□ 1.67
NFIX-203ENST00000397661 HELLSQ9NRZ9 838 aa25.51■■□□□ 1.67
NFIX-203ENST00000397661 EXOSC10Q01780 885 aaKnown RBP25.51■■□□□ 1.67
NFIX-203ENST00000397661 STK38Q15208 465 aa25.51■■□□□ 1.67
NFIX-203ENST00000397661 ILDR1Q86SU0 546 aaPredicted RBP25.51■■□□□ 1.67
NFIX-203ENST00000397661 FDPSP14324 419 aaKnown RBP25.5■■□□□ 1.67
NFIX-203ENST00000397661 USP27XA6NNY8 438 aa25.5■■□□□ 1.67
NFIX-203ENST00000397661 PRC1O43663 620 aa25.5■■□□□ 1.67
NFIX-203ENST00000397661 HMGB1P09429 215 aaKnown RBP25.5■■□□□ 1.67
NFIX-203ENST00000397661 PCDHA7Q9UN72 937 aa25.5■■□□□ 1.67
NFIX-203ENST00000397661 SNAP23O00161 211 aa25.5■■□□□ 1.67
NFIX-203ENST00000397661 IDH1O75874 414 aaKnown RBP25.5■■□□□ 1.67
NFIX-203ENST00000397661 EVA1CP58658 441 aa25.5■■□□□ 1.67
NFIX-203ENST00000397661 PODXL2Q9NZ53 605 aa25.5■■□□□ 1.67
NFIX-203ENST00000397661 ORC3Q9UBD5 711 aaPredicted RBP25.5■■□□□ 1.67
NFIX-203ENST00000397661 SH3TC1Q8TE82 1336 aa25.5■■□□□ 1.67
NFIX-203ENST00000397661 NKX2-3Q8TAU0 364 aa25.49■■□□□ 1.67
NFIX-203ENST00000397661 C8orf76Q96K31 380 aa25.49■■□□□ 1.67
NFIX-203ENST00000397661 ZRSR1Q15695 479 aaKnown RBP25.49■■□□□ 1.67
NFIX-203ENST00000397661 DSCC1Q9BVC3 393 aa25.49■■□□□ 1.67
NFIX-203ENST00000397661 NDUFA8P51970 172 aa25.48■■□□□ 1.67
NFIX-203ENST00000397661 SNW1Q13573 536 aaKnown RBP25.48■■□□□ 1.67
NFIX-203ENST00000397661 RALYLQ86SE5 291 aaKnown RBP25.48■■□□□ 1.67
NFIX-203ENST00000397661 TDRD7Q8NHU6 1098 aaKnown RBP25.48■■□□□ 1.67
NFIX-203ENST00000397661 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.48■■□□□ 1.67
NFIX-203ENST00000397661 ASAP1Q9ULH1 1129 aa25.48■■□□□ 1.67
NFIX-203ENST00000397661 PLA2G4DQ86XP0 818 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms