RNA–Protein interactions for RNA: ENST00000396840.6

IFFO1-204, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene IFFO1, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-204ENST00000396840 CCDC144BQ3MJ40 725 aa21.58■■□□□ 1.05
IFFO1-204ENST00000396840 CCDC144CPQ8IYA2 1237 aa21.58■■□□□ 1.05
IFFO1-204ENST00000396840 H7C1W4 665 aa21.58■■□□□ 1.04
IFFO1-204ENST00000396840 M0R2C6 588 aa21.58■■□□□ 1.04
IFFO1-204ENST00000396840 ZSCAN25Q6NSZ9 544 aa21.58■■□□□ 1.04
IFFO1-204ENST00000396840 MTERF4Q7Z6M4 381 aaKnown RBP21.58■■□□□ 1.04
IFFO1-204ENST00000396840 PLA2G4DQ86XP0 818 aa21.58■■□□□ 1.04
IFFO1-204ENST00000396840 TDRD7Q8NHU6 1098 aaKnown RBP21.58■■□□□ 1.04
IFFO1-204ENST00000396840 GOLGA6L19H0YKK7 550 aa21.57■■□□□ 1.04
IFFO1-204ENST00000396840 ARID5BQ14865 1188 aa21.57■■□□□ 1.04
IFFO1-204ENST00000396840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.57■■□□□ 1.042e-7■■■■■ 28.3
IFFO1-204ENST00000396840 HMGB1P09429 215 aaKnown RBP21.57■■□□□ 1.04
IFFO1-204ENST00000396840 WASHC4Q2M389 1173 aa21.56■■□□□ 1.04
IFFO1-204ENST00000396840 ZMYM1Q5SVZ6 1142 aa21.56■■□□□ 1.04
IFFO1-204ENST00000396840 HELLSQ9NRZ9 838 aa21.56■■□□□ 1.04
IFFO1-204ENST00000396840 PDIA3P30101 505 aaKnown RBP21.56■■□□□ 1.04
IFFO1-204ENST00000396840 GTF2F1P35269 517 aaKnown RBP eCLIP21.56■■□□□ 1.04
IFFO1-204ENST00000396840 EXOSC10Q01780 885 aaKnown RBP21.56■■□□□ 1.04
IFFO1-204ENST00000396840 CACTINQ8WUQ7 758 aaKnown RBP21.56■■□□□ 1.04
IFFO1-204ENST00000396840 LAMA4Q16363 1823 aa21.56■■□□□ 1.04
IFFO1-204ENST00000396840 CCDC73Q6ZRK6 1079 aa21.55■■□□□ 1.04
IFFO1-204ENST00000396840 OSBP2Q969R2 916 aa21.55■■□□□ 1.04
IFFO1-204ENST00000396840 GJB4Q9NTQ9 266 aa21.55■■□□□ 1.04
IFFO1-204ENST00000396840 GORABQ5T7V8 394 aa21.55■■□□□ 1.04
IFFO1-204ENST00000396840 KLHL34Q8N239 644 aa21.55■■□□□ 1.04
IFFO1-204ENST00000396840 LLPHQ9BRT6 129 aaKnown RBP21.55■■□□□ 1.04
IFFO1-204ENST00000396840 DSCC1Q9BVC3 393 aa21.55■■□□□ 1.04
IFFO1-204ENST00000396840 EYA2O00167 538 aa21.54■■□□□ 1.04
IFFO1-204ENST00000396840 RNF113AO15541 343 aaKnown RBP21.54■■□□□ 1.04
IFFO1-204ENST00000396840 ADORA1P30542 326 aa21.54■■□□□ 1.04
IFFO1-204ENST00000396840 IL15P40933 162 aaPredicted RBP21.54■■□□□ 1.04
IFFO1-204ENST00000396840 FSIP1Q8NA03 581 aa21.54■■□□□ 1.04
IFFO1-204ENST00000396840 PALLDQ8WX93 1383 aa21.54■■□□□ 1.04
IFFO1-204ENST00000396840 POLR3DP05423 398 aaPredicted RBP21.54■■□□□ 1.04
IFFO1-204ENST00000396840 ILDR1Q86SU0 546 aaPredicted RBP21.54■■□□□ 1.04
IFFO1-204ENST00000396840 RFX7Q2KHR2 1363 aa21.54■■□□□ 1.04
IFFO1-204ENST00000396840 BECN2A8MW95 431 aa21.53■■□□□ 1.04
IFFO1-204ENST00000396840 KINO60870 393 aaKnown RBP21.53■■□□□ 1.04
IFFO1-204ENST00000396840 SNW1Q13573 536 aaKnown RBP21.53■■□□□ 1.04
IFFO1-204ENST00000396840 NAA16Q6N069 864 aaPredicted RBP21.53■■□□□ 1.04
IFFO1-204ENST00000396840 PI16Q6UXB8 463 aa21.53■■□□□ 1.04
IFFO1-204ENST00000396840 RCOR1Q9UKL0 485 aa21.53■■□□□ 1.04
IFFO1-204ENST00000396840 IQCB1Q15051 598 aa21.53■■□□□ 1.04
IFFO1-204ENST00000396840 ZNF592Q92610 1267 aa21.53■■□□□ 1.04
IFFO1-204ENST00000396840 PPP4R3BQ5MIZ7 849 aa21.52■■□□□ 1.04
IFFO1-204ENST00000396840 FILIP1Q7Z7B0 1213 aa21.52■■□□□ 1.04
IFFO1-204ENST00000396840 CCDC94Q9BW85 323 aaPredicted RBP21.52■■□□□ 1.04
IFFO1-204ENST00000396840 A0A1B0GVL5 298 aa21.52■■□□□ 1.04
IFFO1-204ENST00000396840 CBX1P83916 185 aa21.52■■□□□ 1.04
IFFO1-204ENST00000396840 CARMIL3Q8ND23 1372 aa21.51■■□□□ 1.03
IFFO1-204ENST00000396840 FDPSP14324 419 aaKnown RBP21.51■■□□□ 1.03
IFFO1-204ENST00000396840 SCARF1Q14162 830 aa21.51■■□□□ 1.03
IFFO1-204ENST00000396840 STX1AQ16623 288 aa21.51■■□□□ 1.03
IFFO1-204ENST00000396840 TNNT1P13805 278 aa21.51■■□□□ 1.03
IFFO1-204ENST00000396840 TPD52L1Q16890 204 aaPredicted RBP21.51■■□□□ 1.03
IFFO1-204ENST00000396840 TOM1L2Q6ZVM7 507 aa21.51■■□□□ 1.03
IFFO1-204ENST00000396840 ZNF396Q96N95 335 aaPredicted RBP21.51■■□□□ 1.03
IFFO1-204ENST00000396840 CEP126Q9P2H0 1117 aa21.51■■□□□ 1.03
IFFO1-204ENST00000396840 ZNF142P52746 1687 aaPredicted RBP21.5■■□□□ 1.03
IFFO1-204ENST00000396840 TTC39AQ5SRH9 613 aa21.5■■□□□ 1.03
IFFO1-204ENST00000396840 ALS2Q96Q42 1657 aa21.5■■□□□ 1.03
IFFO1-204ENST00000396840 PCDHA7Q9UN72 937 aa21.5■■□□□ 1.03
IFFO1-204ENST00000396840 SPDYE4A6NLX3 237 aa21.49■■□□□ 1.03
IFFO1-204ENST00000396840 CCDC57Q2TAC2 916 aa21.49■■□□□ 1.03
IFFO1-204ENST00000396840 FAM89AQ96GI7 184 aa21.49■■□□□ 1.03
IFFO1-204ENST00000396840 SDF4Q9BRK5 362 aa21.49■■□□□ 1.03
IFFO1-204ENST00000396840 LMTK3Q96Q04 1460 aa21.49■■□□□ 1.03
IFFO1-204ENST00000396840 FAM160A1Q05DH4 1040 aa21.49■■□□□ 1.03
IFFO1-204ENST00000396840 NAA30Q147X3 362 aaPredicted RBP21.49■■□□□ 1.03
IFFO1-204ENST00000396840 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.49■■□□□ 1.03
IFFO1-204ENST00000396840 AOPEPQ8N6M6 819 aa21.49■■□□□ 1.03
IFFO1-204ENST00000396840 AGXT2Q9BYV1 514 aa21.49■■□□□ 1.03
IFFO1-204ENST00000396840 CLIC4Q9Y696 253 aa21.49■■□□□ 1.03
IFFO1-204ENST00000396840 TMEM94Q12767 1356 aa21.48■■□□□ 1.03
IFFO1-204ENST00000396840 SALL1Q9NSC2 1324 aa21.48■■□□□ 1.03
IFFO1-204ENST00000396840 USP27XA6NNY8 438 aa21.48■■□□□ 1.03
IFFO1-204ENST00000396840 SF3A1Q15459 793 aaKnown RBP21.48■■□□□ 1.03
IFFO1-204ENST00000396840 XAGE2Q96GT9 111 aa21.48■■□□□ 1.03
IFFO1-204ENST00000396840 SYNE4Q8N205 404 aa21.48■■□□□ 1.03
IFFO1-204ENST00000396840 ENGASEQ8NFI3 743 aa21.48■■□□□ 1.03
IFFO1-204ENST00000396840 ZCRB1Q8TBF4 217 aaKnown RBP21.48■■□□□ 1.03
IFFO1-204ENST00000396840 KLF18A0A0U1RQI7 1052 aa21.47■■□□□ 1.03
IFFO1-204ENST00000396840 GOLGA8BA8MQT2 603 aa21.47■■□□□ 1.03
IFFO1-204ENST00000396840 FOXP2O15409 715 aa21.47■■□□□ 1.03
IFFO1-204ENST00000396840 FGAP02671 866 aa21.47■■□□□ 1.03
IFFO1-204ENST00000396840 ATP2B3Q16720 1220 aa21.47■■□□□ 1.03
IFFO1-204ENST00000396840 TAF7LQ5H9L4 462 aa21.47■■□□□ 1.03
IFFO1-204ENST00000396840 CCDC158Q5M9N0 1113 aa21.47■■□□□ 1.03
IFFO1-204ENST00000396840 DHX40Q8IX18 779 aaKnown RBP21.47■■□□□ 1.03
IFFO1-204ENST00000396840 PDCL2Q8N4E4 241 aa21.47■■□□□ 1.03
IFFO1-204ENST00000396840 CCDC191Q8NCU4 936 aa21.47■■□□□ 1.03
IFFO1-204ENST00000396840 PUS7LQ9H0K6 701 aaKnown RBP21.47■■□□□ 1.03
IFFO1-204ENST00000396840 BIN1O00499 593 aa21.47■■□□□ 1.03
IFFO1-204ENST00000396840 ZAP70P43403 619 aa21.47■■□□□ 1.03
IFFO1-204ENST00000396840 NDUFA8P51970 172 aa21.47■■□□□ 1.03
IFFO1-204ENST00000396840 ZNF274Q96GC6 653 aaPredicted RBP21.47■■□□□ 1.03
IFFO1-204ENST00000396840 DENND2AQ9ULE3 1009 aa21.47■■□□□ 1.03
IFFO1-204ENST00000396840 PRC1O43663 620 aa21.46■■□□□ 1.03
IFFO1-204ENST00000396840 LRRC8AQ8IWT6 810 aa21.46■■□□□ 1.03
IFFO1-204ENST00000396840 GPR108Q9NPR9 543 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms