RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 LSG1Q9H089 658 aaKnown RBP15.42■□□□□ 0.06
TRIM39-204ENST00000396548 ANTXR1Q9H6X2 564 aa15.42■□□□□ 0.06
TRIM39-204ENST00000396548 FAM227BQ96M60 508 aa15.42■□□□□ 0.06
TRIM39-204ENST00000396548 CRAMP1Q96RY5 1269 aa15.42■□□□□ 0.06
TRIM39-204ENST00000396548 NMIQ13287 307 aaPredicted RBP15.42■□□□□ 0.06
TRIM39-204ENST00000396548 MSL1Q68DK7 614 aa15.42■□□□□ 0.06
TRIM39-204ENST00000396548 GOLIM4O00461 696 aa15.41■□□□□ 0.06
TRIM39-204ENST00000396548 CHGBP05060 677 aa15.41■□□□□ 0.06
TRIM39-204ENST00000396548 CWC27Q6UX04 472 aaKnown RBP15.41■□□□□ 0.06
TRIM39-204ENST00000396548 FSD1Q9BTV5 496 aa15.41■□□□□ 0.06
TRIM39-204ENST00000396548 RAD50Q92878 1312 aa15.41■□□□□ 0.06
TRIM39-204ENST00000396548 A0A0D9SFI3 127 aa15.41■□□□□ 0.06
TRIM39-204ENST00000396548 NPHP1O15259 732 aa15.41■□□□□ 0.06
TRIM39-204ENST00000396548 ZAP70P43403 619 aa15.41■□□□□ 0.06
TRIM39-204ENST00000396548 PI16Q6UXB8 463 aa15.41■□□□□ 0.06
TRIM39-204ENST00000396548 RBM17Q96I25 401 aaKnown RBP15.41■□□□□ 0.06
TRIM39-204ENST00000396548 ANKRD2Q9GZV1 360 aa15.41■□□□□ 0.06
TRIM39-204ENST00000396548 PARP3Q9Y6F1 533 aa15.41■□□□□ 0.06
TRIM39-204ENST00000396548 COL1A1P02452 1464 aaPredicted RBP15.41■□□□□ 0.06
TRIM39-204ENST00000396548 SRGNP10124 158 aa15.4■□□□□ 0.06
TRIM39-204ENST00000396548 MYH13Q9UKX3 1938 aa15.4■□□□□ 0.06
TRIM39-204ENST00000396548 UQCRFS1P1P0C7P4 283 aa15.4■□□□□ 0.06
TRIM39-204ENST00000396548 GORABQ5T7V8 394 aa15.4■□□□□ 0.06
TRIM39-204ENST00000396548 DIAPH3Q9NSV4 1193 aa15.4■□□□□ 0.06
TRIM39-204ENST00000396548 CYP2E1P05181 493 aaPredicted RBP15.4■□□□□ 0.06
TRIM39-204ENST00000396548 RPGRQ92834 1020 aaKnown RBP15.4■□□□□ 0.06
TRIM39-204ENST00000396548 HMG20BQ9P0W2 317 aa15.4■□□□□ 0.06
TRIM39-204ENST00000396548 CACNA1SQ13698 1873 aa15.39■□□□□ 0.05
TRIM39-204ENST00000396548 BCAMP50895 628 aa15.39■□□□□ 0.05
TRIM39-204ENST00000396548 KIAA1551Q9HCM1 1747 aa15.39■□□□□ 0.05
TRIM39-204ENST00000396548 DUOX1Q9NRD9 1551 aa15.39■□□□□ 0.05
TRIM39-204ENST00000396548 RASGRF1Q13972 1273 aa15.39■□□□□ 0.05
TRIM39-204ENST00000396548 FBXO33Q7Z6M2 555 aa15.39■□□□□ 0.05
TRIM39-204ENST00000396548 RUFY2Q8WXA3 655 aa15.39■□□□□ 0.05
TRIM39-204ENST00000396548 BBOX1O75936 387 aa15.38■□□□□ 0.05
TRIM39-204ENST00000396548 FAM84BQ96KN1 310 aaPredicted RBP15.38■□□□□ 0.05
TRIM39-204ENST00000396548 KLRK1P26718 216 aa15.38■□□□□ 0.05
TRIM39-204ENST00000396548 PTH1RQ03431 593 aa15.38■□□□□ 0.05
TRIM39-204ENST00000396548 ZMYM1Q5SVZ6 1142 aa15.38■□□□□ 0.05
TRIM39-204ENST00000396548 C15orf52Q6ZUT6 534 aaKnown RBP15.38■□□□□ 0.05
TRIM39-204ENST00000396548 KCNB2Q92953 911 aa15.38■□□□□ 0.05
TRIM39-204ENST00000396548 DDRGK1Q96HY6 314 aa15.38■□□□□ 0.05
TRIM39-204ENST00000396548 HSPA4P34932 840 aa15.37■□□□□ 0.05
TRIM39-204ENST00000396548 FKBP4Q02790 459 aaKnown RBP eCLIP15.37■□□□□ 0.05
TRIM39-204ENST00000396548 ZNF589Q86UQ0 364 aaPredicted RBP15.37■□□□□ 0.05
TRIM39-204ENST00000396548 SPATA5Q8NB90 893 aa15.37■□□□□ 0.05
TRIM39-204ENST00000396548 PIH1D3Q9NQM4 214 aaKnown RBP15.37■□□□□ 0.05
TRIM39-204ENST00000396548 PODXL2Q9NZ53 605 aa15.37■□□□□ 0.05
TRIM39-204ENST00000396548 C10orf71Q711Q0 1435 aa15.37■□□□□ 0.05
TRIM39-204ENST00000396548 PDE6BP35913 854 aa15.37■□□□□ 0.05
TRIM39-204ENST00000396548 SLFNL1Q499Z3 407 aa15.37■□□□□ 0.05
TRIM39-204ENST00000396548 ANO2Q9NQ90 1003 aa15.37■□□□□ 0.05
TRIM39-204ENST00000396548 NPR1P16066 1061 aa15.36■□□□□ 0.05
TRIM39-204ENST00000396548 RNF113AO15541 343 aaKnown RBP15.36■□□□□ 0.05
TRIM39-204ENST00000396548 GYG1P46976 350 aa15.36■□□□□ 0.05
TRIM39-204ENST00000396548 GPSM2P81274 684 aa15.36■□□□□ 0.05
TRIM39-204ENST00000396548 SLC16A10Q8TF71 515 aa15.36■□□□□ 0.05
TRIM39-204ENST00000396548 HELLSQ9NRZ9 838 aa15.36■□□□□ 0.05
TRIM39-204ENST00000396548 PALD1Q9ULE6 856 aa15.36■□□□□ 0.05
TRIM39-204ENST00000396548 LEMD3Q9Y2U8 911 aa15.36■□□□□ 0.05
TRIM39-204ENST00000396548 XDHP47989 1333 aa15.36■□□□□ 0.05
TRIM39-204ENST00000396548 PDS5AQ29RF7 1337 aaKnown RBP15.36■□□□□ 0.05
TRIM39-204ENST00000396548 MAP4K1Q92918 833 aa15.36■□□□□ 0.05
TRIM39-204ENST00000396548 SEC62Q99442 399 aaKnown RBP15.36■□□□□ 0.05
TRIM39-204ENST00000396548 CCDC171Q6TFL3 1326 aa15.35■□□□□ 0.05
TRIM39-204ENST00000396548 TTF1Q15361 905 aaPredicted RBP15.35■□□□□ 0.05
TRIM39-204ENST00000396548 TMC4Q7Z404 712 aa15.35■□□□□ 0.05
TRIM39-204ENST00000396548 TXNRD3Q86VQ6 643 aa15.35■□□□□ 0.05
TRIM39-204ENST00000396548 SLX4Q8IY92 1834 aa15.35■□□□□ 0.05
TRIM39-204ENST00000396548 TCRBV5S4A2TA0A5A2 114 aa15.35■□□□□ 0.05
TRIM39-204ENST00000396548 MCMDC2Q4G0Z9 681 aa15.35■□□□□ 0.05
TRIM39-204ENST00000396548 SP8Q8IXZ3 490 aa15.35■□□□□ 0.05
TRIM39-204ENST00000396548 MAST2Q6P0Q8 1798 aa15.35■□□□□ 0.05
TRIM39-204ENST00000396548 ANAPC15P60006 121 aa15.34■□□□□ 0.05
TRIM39-204ENST00000396548 UPF1Q92900 1129 aaKnown RBP eCLIP15.34■□□□□ 0.05
TRIM39-204ENST00000396548 SNED1Q8TER0 1413 aa15.34■□□□□ 0.05
TRIM39-204ENST00000396548 NECTIN1Q15223 517 aa15.34■□□□□ 0.05
TRIM39-204ENST00000396548 SNX21Q969T3 373 aa15.34■□□□□ 0.05
TRIM39-204ENST00000396548 MASTLQ96GX5 879 aa15.34■□□□□ 0.05
TRIM39-204ENST00000396548 ZFYP08048 801 aaPredicted RBP15.34■□□□□ 0.05
TRIM39-204ENST00000396548 ATP6V0A2Q9Y487 856 aa15.34■□□□□ 0.05
TRIM39-204ENST00000396548 MAST3O60307 1309 aa15.33■□□□□ 0.05
TRIM39-204ENST00000396548 PPEF1O14829 653 aaPredicted RBP15.33■□□□□ 0.04
TRIM39-204ENST00000396548 ADD2P35612 726 aa15.33■□□□□ 0.04
TRIM39-204ENST00000396548 STYK1Q6J9G0 422 aa15.33■□□□□ 0.04
TRIM39-204ENST00000396548 OSBP2Q969R2 916 aa15.33■□□□□ 0.04
TRIM39-204ENST00000396548 M0R2C6 588 aa15.33■□□□□ 0.04
TRIM39-204ENST00000396548 SEMA3EO15041 775 aa15.33■□□□□ 0.04
TRIM39-204ENST00000396548 TBC1D2Q9BYX2 928 aa15.33■□□□□ 0.04
TRIM39-204ENST00000396548 ZNF646O15015 1829 aaPredicted RBP15.33■□□□□ 0.04
TRIM39-204ENST00000396548 FOXP2O15409 715 aa15.32■□□□□ 0.04
TRIM39-204ENST00000396548 CAVIN4Q5BKX8 364 aa15.32■□□□□ 0.04
TRIM39-204ENST00000396548 CCDC129Q6ZRS4 1044 aa15.32■□□□□ 0.04
TRIM39-204ENST00000396548 CD2BP2O95400 341 aaKnown RBP15.32■□□□□ 0.04
TRIM39-204ENST00000396548 ALDH1B1P30837 517 aa15.32■□□□□ 0.04
TRIM39-204ENST00000396548 POLLQ9UGP5 575 aa15.32■□□□□ 0.04
TRIM39-204ENST00000396548 ATP2B4P23634 1241 aa15.31■□□□□ 0.04
TRIM39-204ENST00000396548 RABEP1Q15276 862 aa15.31■□□□□ 0.04
TRIM39-204ENST00000396548 UBE3CQ15386 1083 aa15.31■□□□□ 0.04
TRIM39-204ENST00000396548 ANKIB1Q9P2G1 1089 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms