RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 TAF5LO75529 589 aa16.54■□□□□ 0.24
CCHCR1-203ENST00000396268 CHGBP05060 677 aa16.54■□□□□ 0.24
CCHCR1-203ENST00000396268 FOSBP53539 338 aa16.54■□□□□ 0.24
CCHCR1-203ENST00000396268 TNS2Q63HR2 1409 aa16.54■□□□□ 0.24
CCHCR1-203ENST00000396268 LRRC2Q9BYS8 371 aa16.54■□□□□ 0.24
CCHCR1-203ENST00000396268 HMG20BQ9P0W2 317 aa16.54■□□□□ 0.24
CCHCR1-203ENST00000396268 PAPPAQ13219 1627 aa16.54■□□□□ 0.24
CCHCR1-203ENST00000396268 SLIT2O94813 1529 aa16.54■□□□□ 0.24
CCHCR1-203ENST00000396268 NR1I2O75469 434 aa16.53■□□□□ 0.24
CCHCR1-203ENST00000396268 CCDC129Q6ZRS4 1044 aa16.53■□□□□ 0.24
CCHCR1-203ENST00000396268 CCDC186Q7Z3E2 898 aa16.53■□□□□ 0.24
CCHCR1-203ENST00000396268 CERKQ8TCT0 537 aa16.53■□□□□ 0.24
CCHCR1-203ENST00000396268 BRF1Q92994 677 aa16.53■□□□□ 0.24
CCHCR1-203ENST00000396268 NEK1Q96PY6 1258 aa16.53■□□□□ 0.24
CCHCR1-203ENST00000396268 METTL22Q9BUU2 404 aaPredicted RBP16.53■□□□□ 0.24
CCHCR1-203ENST00000396268 DDX19AQ9NUU7 478 aaKnown RBP16.53■□□□□ 0.24
CCHCR1-203ENST00000396268 CGNQ9P2M7 1197 aaKnown RBP16.53■□□□□ 0.24
CCHCR1-203ENST00000396268 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCHCR1-203ENST00000396268 V9GYY5 206 aaPredicted RBP16.53■□□□□ 0.24
CCHCR1-203ENST00000396268 MED23Q9ULK4 1368 aa16.53■□□□□ 0.24
CCHCR1-203ENST00000396268 FAM182BQ5T319 152 aa16.53■□□□□ 0.24
CCHCR1-203ENST00000396268 HSPA1LP34931 641 aa16.52■□□□□ 0.24
CCHCR1-203ENST00000396268 GCKRQ14397 625 aa16.52■□□□□ 0.24
CCHCR1-203ENST00000396268 KLHL34Q8N239 644 aa16.52■□□□□ 0.24
CCHCR1-203ENST00000396268 SEC62Q99442 399 aaKnown RBP16.52■□□□□ 0.24
CCHCR1-203ENST00000396268 UTYO14607 1347 aa16.52■□□□□ 0.24
CCHCR1-203ENST00000396268 LRP6O75581 1613 aa16.52■□□□□ 0.24
CCHCR1-203ENST00000396268 KCNQ2O43526 872 aa16.52■□□□□ 0.23
CCHCR1-203ENST00000396268 GTF2F1P35269 517 aaKnown RBP eCLIP16.52■□□□□ 0.23
CCHCR1-203ENST00000396268 Q6ZUG5 572 aa16.52■□□□□ 0.23
CCHCR1-203ENST00000396268 DNAJC25Q9H1X3 360 aa16.52■□□□□ 0.23
CCHCR1-203ENST00000396268 SNRKQ9NRH2 765 aa16.52■□□□□ 0.23
CCHCR1-203ENST00000396268 DBNLQ9UJU6 430 aaKnown RBP16.52■□□□□ 0.23
CCHCR1-203ENST00000396268 BCL9O00512 1426 aa16.52■□□□□ 0.23
CCHCR1-203ENST00000396268 TFCP2Q12800 502 aa16.51■□□□□ 0.23
CCHCR1-203ENST00000396268 KRT32Q14532 448 aa16.51■□□□□ 0.23
CCHCR1-203ENST00000396268 BCL9LQ86UU0 1499 aa16.51■□□□□ 0.23
CCHCR1-203ENST00000396268 WNK3Q9BYP7 1800 aa16.51■□□□□ 0.23
CCHCR1-203ENST00000396268 NPHP1O15259 732 aa16.51■□□□□ 0.23
CCHCR1-203ENST00000396268 ZNF165P49910 485 aa16.51■□□□□ 0.23
CCHCR1-203ENST00000396268 PTF1AQ7RTS3 328 aa16.51■□□□□ 0.23
CCHCR1-203ENST00000396268 GTF3C6Q969F1 213 aa16.51■□□□□ 0.23
CCHCR1-203ENST00000396268 CLSTN2Q9H4D0 955 aa16.51■□□□□ 0.23
CCHCR1-203ENST00000396268 LAMB4A4D0S4 1761 aa16.51■□□□□ 0.23
CCHCR1-203ENST00000396268 PGBD1Q96JS3 809 aa16.5■□□□□ 0.23
CCHCR1-203ENST00000396268 JCADQ9P266 1359 aa16.5■□□□□ 0.23
CCHCR1-203ENST00000396268 DDX46Q7L014 1031 aaKnown RBP16.5■□□□□ 0.23
CCHCR1-203ENST00000396268 GTPBP4Q9BZE4 634 aaKnown RBP16.5■□□□□ 0.23
CCHCR1-203ENST00000396268 NAP1L2Q9ULW6 460 aaPredicted RBP16.5■□□□□ 0.23
CCHCR1-203ENST00000396268 PPFIA3O75145 1194 aa16.5■□□□□ 0.23
CCHCR1-203ENST00000396268 TNNI3KQ59H18 835 aa16.5■□□□□ 0.23
CCHCR1-203ENST00000396268 UBE3BQ7Z3V4 1068 aa16.5■□□□□ 0.23
CCHCR1-203ENST00000396268 FPGT-TNNI3KV9GXZ4 949 aa16.5■□□□□ 0.23
CCHCR1-203ENST00000396268 DOT1LQ8TEK3 1739 aa16.49■□□□□ 0.23
CCHCR1-203ENST00000396268 BBXQ8WY36 941 aaPredicted RBP16.49■□□□□ 0.23
CCHCR1-203ENST00000396268 DBNDD2Q9BQY9 259 aa16.49■□□□□ 0.23
CCHCR1-203ENST00000396268 ALDH8A1Q9H2A2 487 aaPredicted RBP16.49■□□□□ 0.23
CCHCR1-203ENST00000396268 KCNQ4P56696 695 aa16.48■□□□□ 0.23
CCHCR1-203ENST00000396268 TSGA10IPQ3SY00 556 aa16.48■□□□□ 0.23
CCHCR1-203ENST00000396268 ARFGEF2Q9Y6D5 1785 aa16.48■□□□□ 0.23
CCHCR1-203ENST00000396268 CYP21A2P08686 494 aa16.48■□□□□ 0.23
CCHCR1-203ENST00000396268 ATP5JP18859 108 aa16.48■□□□□ 0.23
CCHCR1-203ENST00000396268 ZNF75DP51815 510 aa16.48■□□□□ 0.23
CCHCR1-203ENST00000396268 PLBD2Q8NHP8 589 aa16.48■□□□□ 0.23
CCHCR1-203ENST00000396268 COL15A1P39059 1388 aa16.48■□□□□ 0.23
CCHCR1-203ENST00000396268 NCBP1Q09161 790 aaKnown RBP16.47■□□□□ 0.23
CCHCR1-203ENST00000396268 THRAP3Q9Y2W1 955 aaKnown RBP16.47■□□□□ 0.23
CCHCR1-203ENST00000396268 PTPN12Q05209 780 aaKnown RBP16.47■□□□□ 0.23
CCHCR1-203ENST00000396268 RESTQ13127 1097 aa16.47■□□□□ 0.23
CCHCR1-203ENST00000396268 CLIP2Q9UDT6 1046 aa16.47■□□□□ 0.23
CCHCR1-203ENST00000396268 CFAP45Q9UL16 551 aa16.47■□□□□ 0.23
CCHCR1-203ENST00000396268 U3KPZ7 1027 aaPredicted RBP16.47■□□□□ 0.23
CCHCR1-203ENST00000396268 A0A087WZG4 1122 aa16.47■□□□□ 0.23
CCHCR1-203ENST00000396268 MCMDC2Q4G0Z9 681 aa16.47■□□□□ 0.23
CCHCR1-203ENST00000396268 USPL1Q5W0Q7 1092 aa16.47■□□□□ 0.23
CCHCR1-203ENST00000396268 COPRSQ9NQ92 184 aa16.47■□□□□ 0.23
CCHCR1-203ENST00000396268 GOLGA6L19H0YKK7 550 aa16.46■□□□□ 0.23
CCHCR1-203ENST00000396268 SCRN1Q12765 414 aa16.46■□□□□ 0.23
CCHCR1-203ENST00000396268 NEUROD6Q96NK8 337 aa16.46■□□□□ 0.23
CCHCR1-203ENST00000396268 FTOQ9C0B1 505 aaKnown RBP eCLIP16.46■□□□□ 0.23
CCHCR1-203ENST00000396268 USP21Q9UK80 565 aa16.46■□□□□ 0.23
CCHCR1-203ENST00000396268 ZBTB1Q9Y2K1 713 aa16.46■□□□□ 0.23
CCHCR1-203ENST00000396268 VGLL3A8MV65 326 aa16.46■□□□□ 0.23
CCHCR1-203ENST00000396268 TNNT1P13805 278 aa16.46■□□□□ 0.23
CCHCR1-203ENST00000396268 FBXW7Q969H0 707 aa16.46■□□□□ 0.23
CCHCR1-203ENST00000396268 CCT2P78371 535 aaKnown RBP16.45■□□□□ 0.22
CCHCR1-203ENST00000396268 SLFNL1Q499Z3 407 aa16.45■□□□□ 0.22
CCHCR1-203ENST00000396268 TDRD7Q8NHU6 1098 aaKnown RBP16.45■□□□□ 0.22
CCHCR1-203ENST00000396268 ZSCAN16Q9H4T2 348 aaPredicted RBP16.45■□□□□ 0.22
CCHCR1-203ENST00000396268 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.45■□□□□ 0.22
CCHCR1-203ENST00000396268 AFDNP55196 1824 aaKnown RBP16.45■□□□□ 0.22
CCHCR1-203ENST00000396268 CYP19A1P11511 503 aaPredicted RBP16.45■□□□□ 0.22
CCHCR1-203ENST00000396268 ZSCAN25Q6NSZ9 544 aa16.45■□□□□ 0.22
CCHCR1-203ENST00000396268 RBM43Q6ZSC3 357 aaKnown RBP16.45■□□□□ 0.22
CCHCR1-203ENST00000396268 BARGINQ6ZT62 677 aa16.45■□□□□ 0.22
CCHCR1-203ENST00000396268 NWD2Q9ULI1 1742 aa16.45■□□□□ 0.22
CCHCR1-203ENST00000396268 A0A087WWV3 80 aa16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 PLA2G4DQ86XP0 818 aa16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 ZNF609O15014 1411 aa16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 GUCY1B3Q02153 619 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms