RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 CEP126Q9P2H0 1117 aa17.36■□□□□ 0.37
RTFDC1-203ENST00000395881 PALD1Q9ULE6 856 aa17.36■□□□□ 0.37
RTFDC1-203ENST00000395881 PDE8AO60658 829 aa17.36■□□□□ 0.37
RTFDC1-203ENST00000395881 HSP90B1P14625 803 aaKnown RBP17.36■□□□□ 0.37
RTFDC1-203ENST00000395881 RAB3GAP1Q15042 981 aa17.36■□□□□ 0.37
RTFDC1-203ENST00000395881 SLC10A5Q5PT55 438 aa17.36■□□□□ 0.37
RTFDC1-203ENST00000395881 DBNDD2Q9BQY9 259 aa17.36■□□□□ 0.37
RTFDC1-203ENST00000395881 FSD1Q9BTV5 496 aa17.36■□□□□ 0.37
RTFDC1-203ENST00000395881 MED23Q9ULK4 1368 aa17.36■□□□□ 0.37
RTFDC1-203ENST00000395881 RIC1Q4ADV7 1423 aa17.35■□□□□ 0.37
RTFDC1-203ENST00000395881 SBF1O95248 1867 aa17.35■□□□□ 0.37
RTFDC1-203ENST00000395881 NPR1P16066 1061 aa17.35■□□□□ 0.37
RTFDC1-203ENST00000395881 CTSWP56202 376 aa17.35■□□□□ 0.37
RTFDC1-203ENST00000395881 CRY2Q49AN0 593 aa17.35■□□□□ 0.37
RTFDC1-203ENST00000395881 C3orf67Q6ZVT6 689 aa17.35■□□□□ 0.37
RTFDC1-203ENST00000395881 TTLL11Q8NHH1 800 aa17.35■□□□□ 0.37
RTFDC1-203ENST00000395881 CNKSR1Q969H4 720 aa17.35■□□□□ 0.37
RTFDC1-203ENST00000395881 TM6SF1Q9BZW5 370 aa17.35■□□□□ 0.37
RTFDC1-203ENST00000395881 CCDC171Q6TFL3 1326 aa17.35■□□□□ 0.37
RTFDC1-203ENST00000395881 LAMB2P55268 1798 aa17.35■□□□□ 0.37
RTFDC1-203ENST00000395881 TRMT112Q9UI30 125 aaKnown RBP17.34■□□□□ 0.37
RTFDC1-203ENST00000395881 IRS4O14654 1257 aaPredicted RBP17.33■□□□□ 0.37
RTFDC1-203ENST00000395881 NMIQ13287 307 aaPredicted RBP17.33■□□□□ 0.37
RTFDC1-203ENST00000395881 LRRC24Q50LG9 513 aa17.33■□□□□ 0.37
RTFDC1-203ENST00000395881 CLEC17AQ6ZS10 378 aa17.33■□□□□ 0.37
RTFDC1-203ENST00000395881 MAP4K1Q92918 833 aa17.33■□□□□ 0.37
RTFDC1-203ENST00000395881 INTS4Q96HW7 963 aaKnown RBP17.33■□□□□ 0.37
RTFDC1-203ENST00000395881 ZNF219Q9P2Y4 722 aaPredicted RBP17.33■□□□□ 0.37
RTFDC1-203ENST00000395881 SNX14Q9Y5W7 946 aa17.33■□□□□ 0.37
RTFDC1-203ENST00000395881 SH3TC1Q8TE82 1336 aa17.32■□□□□ 0.36
RTFDC1-203ENST00000395881 ANKRD18BA2A2Z9 1011 aa17.32■□□□□ 0.36
RTFDC1-203ENST00000395881 C21orf2O43822 256 aa17.32■□□□□ 0.36
RTFDC1-203ENST00000395881 HCLS1P14317 486 aaPredicted RBP17.32■□□□□ 0.36
RTFDC1-203ENST00000395881 MCM4P33991 863 aa17.32■□□□□ 0.36
RTFDC1-203ENST00000395881 NUCB2P80303 420 aa17.32■□□□□ 0.36
RTFDC1-203ENST00000395881 CUL4AQ13619 759 aa17.32■□□□□ 0.36
RTFDC1-203ENST00000395881 TAF7LQ5H9L4 462 aa17.32■□□□□ 0.36
RTFDC1-203ENST00000395881 PRPF40BQ6NWY9 871 aaKnown RBP17.32■□□□□ 0.36
RTFDC1-203ENST00000395881 KBTBD3Q8NAB2 608 aa17.32■□□□□ 0.36
RTFDC1-203ENST00000395881 ZNF594Q96JF6 807 aaPredicted RBP17.32■□□□□ 0.36
RTFDC1-203ENST00000395881 DDX60Q8IY21 1712 aaKnown RBP17.32■□□□□ 0.36
RTFDC1-203ENST00000395881 FER1L6Q2WGJ9 1857 aa17.32■□□□□ 0.36
RTFDC1-203ENST00000395881 CCDC88AQ3V6T2 1871 aa17.32■□□□□ 0.36
RTFDC1-203ENST00000395881 A0A1B0GUL7 405 aa17.32■□□□□ 0.36
RTFDC1-203ENST00000395881 HOXA10P31260 410 aaPredicted RBP17.32■□□□□ 0.36
RTFDC1-203ENST00000395881 NECTIN1Q15223 517 aa17.32■□□□□ 0.36
RTFDC1-203ENST00000395881 C7orf43Q8WVR3 580 aa17.32■□□□□ 0.36
RTFDC1-203ENST00000395881 RTL9Q8NET4 1388 aa17.31■□□□□ 0.36
RTFDC1-203ENST00000395881 PTMSP20962 102 aa17.31■□□□□ 0.36
RTFDC1-203ENST00000395881 FAM227BQ96M60 508 aa17.31■□□□□ 0.36
RTFDC1-203ENST00000395881 NEUROD6Q96NK8 337 aa17.31■□□□□ 0.36
RTFDC1-203ENST00000395881 NLRP3Q96P20 1036 aa17.31■□□□□ 0.36
RTFDC1-203ENST00000395881 GBP4Q96PP9 640 aa17.31■□□□□ 0.36
RTFDC1-203ENST00000395881 RIPOR2Q9Y4F9 1068 aa17.31■□□□□ 0.36
RTFDC1-203ENST00000395881 DDX11L8A8MPP1 907 aa17.3■□□□□ 0.36
RTFDC1-203ENST00000395881 ZKSCAN1P17029 563 aaPredicted RBP17.3■□□□□ 0.36
RTFDC1-203ENST00000395881 ITGA6P23229 1130 aa17.3■□□□□ 0.36
RTFDC1-203ENST00000395881 RNF20Q5VTR2 975 aa17.3■□□□□ 0.36
RTFDC1-203ENST00000395881 ZNF784Q8NCA9 323 aaPredicted RBP17.3■□□□□ 0.36
RTFDC1-203ENST00000395881 TMX3Q96JJ7 454 aa17.3■□□□□ 0.36
RTFDC1-203ENST00000395881 PUS3Q9BZE2 481 aaKnown RBP17.3■□□□□ 0.36
RTFDC1-203ENST00000395881 HMG20BQ9P0W2 317 aa17.3■□□□□ 0.36
RTFDC1-203ENST00000395881 TAF1P21675 1872 aa17.3■□□□□ 0.36
RTFDC1-203ENST00000395881 A0A0D9SFI3 127 aa17.29■□□□□ 0.36
RTFDC1-203ENST00000395881 NFKBIEO00221 500 aa17.29■□□□□ 0.36
RTFDC1-203ENST00000395881 PRELPP51888 382 aa17.29■□□□□ 0.36
RTFDC1-203ENST00000395881 TIMM10P62072 90 aa17.29■□□□□ 0.36
RTFDC1-203ENST00000395881 RASSF7Q02833 373 aa17.29■□□□□ 0.36
RTFDC1-203ENST00000395881 PTH1RQ03431 593 aa17.29■□□□□ 0.36
RTFDC1-203ENST00000395881 LRRFIP1Q32MZ4 808 aaKnown RBP17.29■□□□□ 0.36
RTFDC1-203ENST00000395881 TSGA10IPQ3SY00 556 aa17.29■□□□□ 0.36
RTFDC1-203ENST00000395881 CCDC158Q5M9N0 1113 aa17.29■□□□□ 0.36
RTFDC1-203ENST00000395881 ZNF512BQ96KM6 892 aaPredicted RBP17.29■□□□□ 0.36
RTFDC1-203ENST00000395881 TTC14Q96N46 770 aa17.29■□□□□ 0.36
RTFDC1-203ENST00000395881 GREM2Q9H772 168 aa17.29■□□□□ 0.36
RTFDC1-203ENST00000395881 PAG1Q9NWQ8 432 aa17.29■□□□□ 0.36
RTFDC1-203ENST00000395881 ALDH1B1P30837 517 aa17.28■□□□□ 0.36
RTFDC1-203ENST00000395881 LDHAL6AQ6ZMR3 332 aa17.28■□□□□ 0.36
RTFDC1-203ENST00000395881 RASEFQ8IZ41 740 aa17.28■□□□□ 0.36
RTFDC1-203ENST00000395881 RPGRQ92834 1020 aaKnown RBP17.28■□□□□ 0.36
RTFDC1-203ENST00000395881 TNPO1Q92973 898 aaKnown RBP17.28■□□□□ 0.36
RTFDC1-203ENST00000395881 CYP2E1P05181 493 aaPredicted RBP17.28■□□□□ 0.36
RTFDC1-203ENST00000395881 MCMDC2Q4G0Z9 681 aa17.28■□□□□ 0.36
RTFDC1-203ENST00000395881 C9orf131Q5VYM1 1079 aa17.28■□□□□ 0.36
RTFDC1-203ENST00000395881 OLFM4Q6UX06 510 aa17.28■□□□□ 0.36
RTFDC1-203ENST00000395881 CRAMP1Q96RY5 1269 aa17.28■□□□□ 0.36
RTFDC1-203ENST00000395881 ZSWIM6Q9HCJ5 1215 aa17.28■□□□□ 0.36
RTFDC1-203ENST00000395881 HELLSQ9NRZ9 838 aa17.28■□□□□ 0.36
RTFDC1-203ENST00000395881 RBM8AQ9Y5S9 174 aaKnown RBP17.28■□□□□ 0.36
RTFDC1-203ENST00000395881 TAF5LO75529 589 aa17.27■□□□□ 0.35
RTFDC1-203ENST00000395881 IFIT1P09914 478 aaKnown RBP17.27■□□□□ 0.35
RTFDC1-203ENST00000395881 PSMA5P28066 241 aa17.27■□□□□ 0.35
RTFDC1-203ENST00000395881 VPS53Q5VIR6 699 aa17.27■□□□□ 0.35
RTFDC1-203ENST00000395881 CREB3L3Q68CJ9 461 aa17.27■□□□□ 0.35
RTFDC1-203ENST00000395881 RBM17Q96I25 401 aaKnown RBP17.27■□□□□ 0.35
RTFDC1-203ENST00000395881 DNAJC2Q99543 621 aaKnown RBP17.27■□□□□ 0.35
RTFDC1-203ENST00000395881 ARAP2Q8WZ64 1704 aa17.26■□□□□ 0.35
RTFDC1-203ENST00000395881 MROH5Q6ZUA9 1318 aa17.26■□□□□ 0.35
RTFDC1-203ENST00000395881 METTL24Q5JXM2 366 aa17.26■□□□□ 0.35
RTFDC1-203ENST00000395881 SLC51AQ86UW1 340 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms