RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TSGA10IPQ3SY00 556 aa15.95■□□□□ 0.14
GTF2F1-201ENST00000394456 VSIG10Q8N0Z9 540 aa15.95■□□□□ 0.14
GTF2F1-201ENST00000394456 FAM89AQ96GI7 184 aa15.95■□□□□ 0.14
GTF2F1-201ENST00000394456 ISCA1Q9BUE6 129 aa15.95■□□□□ 0.14
GTF2F1-201ENST00000394456 NOLC1Q14978 699 aaKnown RBP eCLIP15.94■□□□□ 0.14
GTF2F1-201ENST00000394456 ANKRD1Q15327 319 aa15.94■□□□□ 0.14
GTF2F1-201ENST00000394456 SYNE4Q8N205 404 aa15.94■□□□□ 0.14
GTF2F1-201ENST00000394456 TEX13AQ9BXU3 409 aaPredicted RBP15.94■□□□□ 0.14
GTF2F1-201ENST00000394456 HLFQ16534 295 aa15.94■□□□□ 0.14
GTF2F1-201ENST00000394456 ANO6Q4KMQ2 910 aa15.94■□□□□ 0.14
GTF2F1-201ENST00000394456 RAB11FIP4Q86YS3 637 aa15.94■□□□□ 0.14
GTF2F1-201ENST00000394456 KBTBD3Q8NAB2 608 aa15.94■□□□□ 0.14
GTF2F1-201ENST00000394456 HMG20BQ9P0W2 317 aa15.94■□□□□ 0.14
GTF2F1-201ENST00000394456 ZBTB1Q9Y2K1 713 aa15.94■□□□□ 0.14
GTF2F1-201ENST00000394456 FGD1P98174 961 aa15.93■□□□□ 0.14
GTF2F1-201ENST00000394456 MAP3K11Q16584 847 aa15.93■□□□□ 0.14
GTF2F1-201ENST00000394456 PAG1Q9NWQ8 432 aa15.93■□□□□ 0.14
GTF2F1-201ENST00000394456 CCDC192P0DO97 292 aa15.93■□□□□ 0.14
GTF2F1-201ENST00000394456 CSPP1Q1MSJ5 1256 aa15.93■□□□□ 0.14
GTF2F1-201ENST00000394456 PIBF1Q8WXW3 757 aa15.93■□□□□ 0.14
GTF2F1-201ENST00000394456 ERCC4Q92889 916 aaPredicted RBP15.93■□□□□ 0.14
GTF2F1-201ENST00000394456 ACSBG1Q96GR2 724 aa15.93■□□□□ 0.14
GTF2F1-201ENST00000394456 NRBP1Q9UHY1 535 aa15.93■□□□□ 0.14
GTF2F1-201ENST00000394456 CYP19A1P11511 503 aaPredicted RBP15.92■□□□□ 0.14
GTF2F1-201ENST00000394456 ADORA1P30542 326 aa15.92■□□□□ 0.14
GTF2F1-201ENST00000394456 PI16Q6UXB8 463 aa15.92■□□□□ 0.14
GTF2F1-201ENST00000394456 BICD2Q8TD16 824 aa15.92■□□□□ 0.14
GTF2F1-201ENST00000394456 TNMDQ9H2S6 317 aa15.92■□□□□ 0.14
GTF2F1-201ENST00000394456 CBX8Q9HC52 389 aa15.92■□□□□ 0.14
GTF2F1-201ENST00000394456 GOLGA6L4A6NEF3 574 aa15.92■□□□□ 0.14
GTF2F1-201ENST00000394456 M0R2C6 588 aa15.92■□□□□ 0.14
GTF2F1-201ENST00000394456 PDCP20941 246 aa15.92■□□□□ 0.14
GTF2F1-201ENST00000394456 ALDH8A1Q9H2A2 487 aaPredicted RBP15.92■□□□□ 0.14
GTF2F1-201ENST00000394456 U3KPZ7 1027 aaPredicted RBP15.92■□□□□ 0.14
GTF2F1-201ENST00000394456 PTGS1P23219 599 aa15.91■□□□□ 0.14
GTF2F1-201ENST00000394456 HAND2P61296 217 aa15.91■□□□□ 0.14
GTF2F1-201ENST00000394456 SASS6Q6UVJ0 657 aa15.91■□□□□ 0.14
GTF2F1-201ENST00000394456 H3BQV1 296 aa15.91■□□□□ 0.14
GTF2F1-201ENST00000394456 LRMPQ12912 555 aa15.91■□□□□ 0.14
GTF2F1-201ENST00000394456 SCARF1Q14162 830 aa15.91■□□□□ 0.14
GTF2F1-201ENST00000394456 DDB1Q16531 1140 aa15.91■□□□□ 0.14
GTF2F1-201ENST00000394456 IFFO2Q5TF58 517 aa15.91■□□□□ 0.14
GTF2F1-201ENST00000394456 OTUD7BQ6GQQ9 843 aa15.91■□□□□ 0.14
GTF2F1-201ENST00000394456 NSUN7Q8NE18 718 aaKnown RBP15.91■□□□□ 0.14
GTF2F1-201ENST00000394456 DNAJC25Q9H1X3 360 aa15.91■□□□□ 0.14
GTF2F1-201ENST00000394456 TAOK2Q9UL54 1235 aa15.91■□□□□ 0.14
GTF2F1-201ENST00000394456 SPATA31A1Q5TZJ5 1347 aa15.91■□□□□ 0.14
GTF2F1-201ENST00000394456 MAP3K15Q6ZN16 1313 aa15.91■□□□□ 0.14
GTF2F1-201ENST00000394456 NRAPQ86VF7 1730 aa15.9■□□□□ 0.14
GTF2F1-201ENST00000394456 TBC1D2BQ9UPU7 963 aa15.9■□□□□ 0.14
GTF2F1-201ENST00000394456 MAST3O60307 1309 aa15.9■□□□□ 0.14
GTF2F1-201ENST00000394456 ELP1O95163 1332 aa15.9■□□□□ 0.14
GTF2F1-201ENST00000394456 A0A1B0GUL7 405 aa15.9■□□□□ 0.14
GTF2F1-201ENST00000394456 EYA2O00167 538 aa15.9■□□□□ 0.14
GTF2F1-201ENST00000394456 HSPD1P10809 573 aaKnown RBP15.9■□□□□ 0.14
GTF2F1-201ENST00000394456 ADD1P35611 737 aaKnown RBP15.9■□□□□ 0.14
GTF2F1-201ENST00000394456 FKBP4Q02790 459 aaKnown RBP eCLIP15.9■□□□□ 0.14
GTF2F1-201ENST00000394456 LRP6O75581 1613 aa15.9■□□□□ 0.14
GTF2F1-201ENST00000394456 PTPDC1A2A3K4 754 aa15.89■□□□□ 0.13
GTF2F1-201ENST00000394456 IL15P40933 162 aaPredicted RBP15.89■□□□□ 0.13
GTF2F1-201ENST00000394456 GIGYF2Q6Y7W6 1299 aaKnown RBP15.89■□□□□ 0.13
GTF2F1-201ENST00000394456 FAM200AQ8TCP9 573 aa15.89■□□□□ 0.13
GTF2F1-201ENST00000394456 FBXW7Q969H0 707 aa15.89■□□□□ 0.13
GTF2F1-201ENST00000394456 OSBP2Q969R2 916 aa15.89■□□□□ 0.13
GTF2F1-201ENST00000394456 GOLPH3LQ9H4A5 285 aa15.89■□□□□ 0.13
GTF2F1-201ENST00000394456 GJB4Q9NTQ9 266 aa15.89■□□□□ 0.13
GTF2F1-201ENST00000394456 NUP98P52948 1817 aa15.89■□□□□ 0.13
GTF2F1-201ENST00000394456 E7EWF7 191 aa15.89■□□□□ 0.13
GTF2F1-201ENST00000394456 KRT32Q14532 448 aa15.89■□□□□ 0.13
GTF2F1-201ENST00000394456 CCDC57Q2TAC2 916 aa15.89■□□□□ 0.13
GTF2F1-201ENST00000394456 NKX2-3Q8TAU0 364 aa15.89■□□□□ 0.13
GTF2F1-201ENST00000394456 SCAND2PQ9GZW5 306 aaPredicted RBP15.89■□□□□ 0.13
GTF2F1-201ENST00000394456 CLSTN2Q9H4D0 955 aa15.89■□□□□ 0.13
GTF2F1-201ENST00000394456 FOXP2O15409 715 aa15.88■□□□□ 0.13
GTF2F1-201ENST00000394456 IFIT1P09914 478 aaKnown RBP15.88■□□□□ 0.13
GTF2F1-201ENST00000394456 DENND2AQ9ULE3 1009 aa15.88■□□□□ 0.13
GTF2F1-201ENST00000394456 PCCAP05165 728 aaPredicted RBP15.88■□□□□ 0.13
GTF2F1-201ENST00000394456 TERF1P54274 439 aa15.88■□□□□ 0.13
GTF2F1-201ENST00000394456 ZMYM1Q5SVZ6 1142 aa15.88■□□□□ 0.13
GTF2F1-201ENST00000394456 PALLDQ8WX93 1383 aa15.88■□□□□ 0.13
GTF2F1-201ENST00000394456 TRIM28Q13263 835 aaKnown RBP15.88■□□□□ 0.13
GTF2F1-201ENST00000394456 DHX32Q7L7V1 743 aaKnown RBP15.88■□□□□ 0.13
GTF2F1-201ENST00000394456 ILDR1Q86SU0 546 aaPredicted RBP15.88■□□□□ 0.13
GTF2F1-201ENST00000394456 MARCH10Q8NA82 808 aaPredicted RBP15.88■□□□□ 0.13
GTF2F1-201ENST00000394456 ZBTB38Q8NAP3 1195 aaPredicted RBP15.88■□□□□ 0.13
GTF2F1-201ENST00000394456 SMARCC2Q8TAQ2 1214 aa15.88■□□□□ 0.13
GTF2F1-201ENST00000394456 USP28Q96RU2 1077 aa15.88■□□□□ 0.13
GTF2F1-201ENST00000394456 SH3TC1Q8TE82 1336 aa15.88■□□□□ 0.13
GTF2F1-201ENST00000394456 PFKFB2O60825 505 aa15.87■□□□□ 0.13
GTF2F1-201ENST00000394456 EXOSC10Q01780 885 aaKnown RBP15.87■□□□□ 0.13
GTF2F1-201ENST00000394456 NLRP10Q86W26 655 aa15.87■□□□□ 0.13
GTF2F1-201ENST00000394456 ANKRD36CQ5JPF3 1778 aa15.87■□□□□ 0.13
GTF2F1-201ENST00000394456 C11orf57Q6ZUT1 292 aaPredicted RBP15.87■□□□□ 0.13
GTF2F1-201ENST00000394456 KIAA1524Q8TCG1 905 aa15.87■□□□□ 0.13
GTF2F1-201ENST00000394456 TAF7LQ5H9L4 462 aa15.86■□□□□ 0.13
GTF2F1-201ENST00000394456 CCDC186Q7Z3E2 898 aa15.86■□□□□ 0.13
GTF2F1-201ENST00000394456 DZIP3Q86Y13 1208 aaKnown RBP15.86■□□□□ 0.13
GTF2F1-201ENST00000394456 PDCL3Q9H2J4 239 aa15.86■□□□□ 0.13
GTF2F1-201ENST00000394456 FDPSP14324 419 aaKnown RBP15.85■□□□□ 0.13
GTF2F1-201ENST00000394456 PDIA3P30101 505 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms