RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 NECAB1Q8N987 351 aa16.54■□□□□ 0.24
PPARGC1B-203ENST00000394320 CCDC87Q9NVE4 849 aa16.54■□□□□ 0.24
PPARGC1B-203ENST00000394320 TBCAO75347 108 aaKnown RBP16.54■□□□□ 0.24
PPARGC1B-203ENST00000394320 CCDC40Q4G0X9 1142 aa16.54■□□□□ 0.24
PPARGC1B-203ENST00000394320 BRAPQ7Z569 592 aa16.54■□□□□ 0.24
PPARGC1B-203ENST00000394320 JDP2Q8WYK2 163 aa16.54■□□□□ 0.24
PPARGC1B-203ENST00000394320 TRIM75PA6NK02 468 aa16.54■□□□□ 0.24
PPARGC1B-203ENST00000394320 F13A1P00488 732 aa16.54■□□□□ 0.24
PPARGC1B-203ENST00000394320 ZRSR2Q15696 482 aaKnown RBP16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 LEKR1Q6ZMV7 388 aa16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 G2E3Q7L622 706 aa16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 USP37Q86T82 979 aa16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 MAGEB6Q8N7X4 407 aa16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 RBM28Q9NW13 759 aaKnown RBP16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 MAST3O60307 1309 aa16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 NUP88Q99567 741 aaPredicted RBP16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 NAP1L4Q99733 375 aaKnown RBP16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 MCM9Q9NXL9 1143 aa16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 TNNI3KQ59H18 835 aa16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 FPGT-TNNI3KV9GXZ4 949 aa16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 CCDC66A2RUB6 948 aa16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 SEPT7Q16181 437 aaKnown RBP16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 MPNDQ8N594 471 aa16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 CTAGE1Q96RT6 745 aa16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 EXOC1Q9NV70 894 aa16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 TNNQ9UQP3 1299 aa16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 ATP7BP35670 1465 aa16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 NLRP1Q9C000 1473 aa16.53■□□□□ 0.24
PPARGC1B-203ENST00000394320 GNA11P29992 359 aa16.52■□□□□ 0.24
PPARGC1B-203ENST00000394320 GDPD2Q9HCC8 539 aa16.52■□□□□ 0.24
PPARGC1B-203ENST00000394320 KAT6BQ8WYB5 2073 aa16.52■□□□□ 0.24
PPARGC1B-203ENST00000394320 EIF4A1P60842 406 aaKnown RBP16.52■□□□□ 0.24
PPARGC1B-203ENST00000394320 RUFY3Q7L099 469 aa16.52■□□□□ 0.24
PPARGC1B-203ENST00000394320 A0A1B0GUL7 405 aa16.52■□□□□ 0.23
PPARGC1B-203ENST00000394320 CCDC172P0C7W6 258 aa16.52■□□□□ 0.23
PPARGC1B-203ENST00000394320 NEFHP12036 1026 aa16.52■□□□□ 0.23
PPARGC1B-203ENST00000394320 ITGA6P23229 1130 aa16.52■□□□□ 0.23
PPARGC1B-203ENST00000394320 RRP36Q96EU6 259 aaKnown RBP16.52■□□□□ 0.23
PPARGC1B-203ENST00000394320 NAPAP54920 295 aa16.52■□□□□ 0.23
PPARGC1B-203ENST00000394320 PREX2Q70Z35 1606 aa16.51■□□□□ 0.23
PPARGC1B-203ENST00000394320 NF2P35240 595 aa16.51■□□□□ 0.23
PPARGC1B-203ENST00000394320 TMEM87BQ96K49 555 aa16.51■□□□□ 0.23
PPARGC1B-203ENST00000394320 USP25Q9UHP3 1055 aa16.51■□□□□ 0.23
PPARGC1B-203ENST00000394320 PRKCSHP14314 528 aaPredicted RBP16.51■□□□□ 0.23
PPARGC1B-203ENST00000394320 MAP9Q49MG5 647 aa16.51■□□□□ 0.23
PPARGC1B-203ENST00000394320 SH2D4AQ9H788 454 aa16.51■□□□□ 0.23
PPARGC1B-203ENST00000394320 LGR6Q9HBX8 967 aa16.51■□□□□ 0.23
PPARGC1B-203ENST00000394320 STK32BQ9NY57 414 aa16.51■□□□□ 0.23
PPARGC1B-203ENST00000394320 PAFAH1B1P43034 410 aa16.51■□□□□ 0.23
PPARGC1B-203ENST00000394320 GCKRQ14397 625 aa16.51■□□□□ 0.23
PPARGC1B-203ENST00000394320 FAM89AQ96GI7 184 aa16.51■□□□□ 0.23
PPARGC1B-203ENST00000394320 TNNI2P48788 182 aa16.51■□□□□ 0.23
PPARGC1B-203ENST00000394320 HEATR3Q7Z4Q2 680 aa16.51■□□□□ 0.23
PPARGC1B-203ENST00000394320 APPBP2Q92624 585 aa16.51■□□□□ 0.23
PPARGC1B-203ENST00000394320 SPATA31E1Q6ZUB1 1445 aa16.5■□□□□ 0.23
PPARGC1B-203ENST00000394320 USP19O94966 1318 aa16.5■□□□□ 0.23
PPARGC1B-203ENST00000394320 LRSAM1Q6UWE0 723 aa16.5■□□□□ 0.23
PPARGC1B-203ENST00000394320 HELBQ8NG08 1087 aaPredicted RBP16.5■□□□□ 0.23
PPARGC1B-203ENST00000394320 USP26Q9BXU7 913 aa16.5■□□□□ 0.23
PPARGC1B-203ENST00000394320 LRRC2Q9BYS8 371 aa16.5■□□□□ 0.23
PPARGC1B-203ENST00000394320 STAT6P42226 847 aa16.5■□□□□ 0.23
PPARGC1B-203ENST00000394320 KIF4BQ2VIQ3 1234 aa16.5■□□□□ 0.23
PPARGC1B-203ENST00000394320 TDRD12Q587J7 1177 aaKnown RBP16.5■□□□□ 0.23
PPARGC1B-203ENST00000394320 HIBADHP31937 336 aaKnown RBP16.5■□□□□ 0.23
PPARGC1B-203ENST00000394320 RAB11FIP4Q86YS3 637 aa16.5■□□□□ 0.23
PPARGC1B-203ENST00000394320 WDR66Q8TBY9 1149 aa16.5■□□□□ 0.23
PPARGC1B-203ENST00000394320 SAMM50Q9Y512 469 aa16.5■□□□□ 0.23
PPARGC1B-203ENST00000394320 AK2P54819 239 aa16.49■□□□□ 0.23
PPARGC1B-203ENST00000394320 LPIN2Q92539 896 aa16.49■□□□□ 0.23
PPARGC1B-203ENST00000394320 SYCP3Q8IZU3 236 aa16.49■□□□□ 0.23
PPARGC1B-203ENST00000394320 TCEANC2Q96MN5 208 aa16.49■□□□□ 0.23
PPARGC1B-203ENST00000394320 MROH5Q6ZUA9 1318 aa16.49■□□□□ 0.23
PPARGC1B-203ENST00000394320 SPTLC2O15270 562 aa16.49■□□□□ 0.23
PPARGC1B-203ENST00000394320 PICALMQ13492 652 aa16.49■□□□□ 0.23
PPARGC1B-203ENST00000394320 EHBP1Q8NDI1 1231 aa16.49■□□□□ 0.23
PPARGC1B-203ENST00000394320 SMARCC2Q8TAQ2 1214 aa16.49■□□□□ 0.23
PPARGC1B-203ENST00000394320 ALS2CR12Q96Q35 445 aa16.49■□□□□ 0.23
PPARGC1B-203ENST00000394320 CLASP1Q7Z460 1538 aa16.49■□□□□ 0.23
PPARGC1B-203ENST00000394320 F8W031 263 aaPredicted RBP16.49■□□□□ 0.23
PPARGC1B-203ENST00000394320 BIN1O00499 593 aa16.49■□□□□ 0.23
PPARGC1B-203ENST00000394320 NEBLO76041 1014 aa16.49■□□□□ 0.23
PPARGC1B-203ENST00000394320 SSR1P43307 286 aaKnown RBP16.49■□□□□ 0.23
PPARGC1B-203ENST00000394320 TRIM47Q96LD4 638 aa16.49■□□□□ 0.23
PPARGC1B-203ENST00000394320 HECW2Q9P2P5 1572 aa16.49■□□□□ 0.23
PPARGC1B-203ENST00000394320 PSMA7O14818 248 aa16.48■□□□□ 0.23
PPARGC1B-203ENST00000394320 CASQ1P31415 396 aa16.48■□□□□ 0.23
PPARGC1B-203ENST00000394320 PPP2R5BQ15173 497 aa16.48■□□□□ 0.23
PPARGC1B-203ENST00000394320 ZNF496Q96IT1 587 aaPredicted RBP16.48■□□□□ 0.23
PPARGC1B-203ENST00000394320 UQCRHLA0A096LP55 91 aa16.48■□□□□ 0.23
PPARGC1B-203ENST00000394320 H0YHG0 523 aa16.48■□□□□ 0.23
PPARGC1B-203ENST00000394320 UQCRHP07919 91 aa16.48■□□□□ 0.23
PPARGC1B-203ENST00000394320 KRT2P35908 639 aa16.48■□□□□ 0.23
PPARGC1B-203ENST00000394320 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.48■□□□□ 0.23
PPARGC1B-203ENST00000394320 FAM200AQ8TCP9 573 aa16.48■□□□□ 0.23
PPARGC1B-203ENST00000394320 TCERG1LQ5VWI1 586 aa16.48■□□□□ 0.23
PPARGC1B-203ENST00000394320 TTC37Q6PGP7 1564 aa16.48■□□□□ 0.23
PPARGC1B-203ENST00000394320 MBD4O95243 580 aa16.47■□□□□ 0.23
PPARGC1B-203ENST00000394320 PRIM1P49642 420 aaKnown RBP16.47■□□□□ 0.23
PPARGC1B-203ENST00000394320 LLPHQ9BRT6 129 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms