RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 ZNF512BQ96KM6 892 aaPredicted RBP27.7■■■□□ 2.02
RARA-204ENST00000394089 GOLIM4O00461 696 aa27.69■■■□□ 2.02
RARA-204ENST00000394089 PTH1RQ03431 593 aa27.69■■■□□ 2.02
RARA-204ENST00000394089 PUM3Q15397 648 aaKnown RBP27.69■■■□□ 2.02
RARA-204ENST00000394089 CDC5LQ99459 802 aaKnown RBP27.69■■■□□ 2.02
RARA-204ENST00000394089 FGFR2P21802 821 aa27.68■■■□□ 2.02
RARA-204ENST00000394089 GTF2E1P29083 439 aaPredicted RBP27.68■■■□□ 2.02
RARA-204ENST00000394089 SMAP1Q8IYB5 467 aaPredicted RBP27.68■■■□□ 2.02
RARA-204ENST00000394089 PHF14O94880 888 aa27.68■■■□□ 2.02
RARA-204ENST00000394089 MCM5P33992 734 aa27.68■■■□□ 2.02
RARA-204ENST00000394089 NBPF5PQ86XG9 351 aaPredicted RBP27.68■■■□□ 2.02
RARA-204ENST00000394089 LPIN2Q92539 896 aa27.68■■■□□ 2.02
RARA-204ENST00000394089 TPTE2Q6XPS3 522 aa27.67■■■□□ 2.02
RARA-204ENST00000394089 KCNB2Q92953 911 aa27.67■■■□□ 2.02
RARA-204ENST00000394089 MAP4K1Q92918 833 aa27.67■■■□□ 2.02
RARA-204ENST00000394089 UBR3Q6ZT12 1888 aa27.66■■■□□ 2.02
RARA-204ENST00000394089 C3orf67Q6ZVT6 689 aa27.66■■■□□ 2.02
RARA-204ENST00000394089 ARAP2Q8WZ64 1704 aa27.66■■■□□ 2.02
RARA-204ENST00000394089 SNX14Q9Y5W7 946 aa27.65■■■□□ 2.02
RARA-204ENST00000394089 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.65■■■□□ 2.02
RARA-204ENST00000394089 NEK4P51957 841 aa27.65■■■□□ 2.02
RARA-204ENST00000394089 SSFA2P28290 1259 aa27.64■■■□□ 2.02
RARA-204ENST00000394089 RXRBP28702 533 aa27.64■■■□□ 2.02
RARA-204ENST00000394089 DYNC1I1O14576 645 aa27.63■■■□□ 2.01
RARA-204ENST00000394089 SLC5A1P13866 664 aa27.63■■■□□ 2.01
RARA-204ENST00000394089 MCM2P49736 904 aa27.63■■■□□ 2.01
RARA-204ENST00000394089 NECTIN1Q15223 517 aa27.63■■■□□ 2.01
RARA-204ENST00000394089 TXNRD1Q16881 649 aa27.63■■■□□ 2.01
RARA-204ENST00000394089 MCMDC2Q4G0Z9 681 aa27.63■■■□□ 2.01
RARA-204ENST00000394089 CSPP1Q1MSJ5 1256 aa27.63■■■□□ 2.01
RARA-204ENST00000394089 ZNF589Q86UQ0 364 aaPredicted RBP27.63■■■□□ 2.01
RARA-204ENST00000394089 HELBQ8NG08 1087 aaPredicted RBP27.63■■■□□ 2.01
RARA-204ENST00000394089 NLRP3Q96P20 1036 aa27.63■■■□□ 2.01
RARA-204ENST00000394089 HELLSQ9NRZ9 838 aa27.63■■■□□ 2.01
RARA-204ENST00000394089 CARMIL3Q8ND23 1372 aa27.63■■■□□ 2.01
RARA-204ENST00000394089 BAG4O95429 457 aaKnown RBP27.62■■■□□ 2.01
RARA-204ENST00000394089 FKBP4Q02790 459 aaKnown RBP eCLIP27.62■■■□□ 2.01
RARA-204ENST00000394089 SCARF1Q14162 830 aa27.62■■■□□ 2.01
RARA-204ENST00000394089 LRRFIP1Q32MZ4 808 aaKnown RBP27.62■■■□□ 2.01
RARA-204ENST00000394089 ANKRD18AQ8IVF6 992 aa27.62■■■□□ 2.01
RARA-204ENST00000394089 RBM8AQ9Y5S9 174 aaKnown RBP27.62■■■□□ 2.01
RARA-204ENST00000394089 CASZ1Q86V15 1759 aa27.62■■■□□ 2.01
RARA-204ENST00000394089 TAF5LO75529 589 aa27.62■■■□□ 2.01
RARA-204ENST00000394089 UQCRFS1P1P0C7P4 283 aa27.62■■■□□ 2.01
RARA-204ENST00000394089 RASEFQ8IZ41 740 aa27.62■■■□□ 2.01
RARA-204ENST00000394089 PROM2Q8N271 834 aa27.62■■■□□ 2.01
RARA-204ENST00000394089 PLSCR1O15162 318 aa27.61■■■□□ 2.01
RARA-204ENST00000394089 ZMYM1Q5SVZ6 1142 aa27.61■■■□□ 2.01
RARA-204ENST00000394089 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.61■■■□□ 2.01
RARA-204ENST00000394089 RNF113AO15541 343 aaKnown RBP27.6■■■□□ 2.01
RARA-204ENST00000394089 ARID4AP29374 1257 aaPredicted RBP27.6■■■□□ 2.01
RARA-204ENST00000394089 NFIXQ14938 502 aa27.6■■■□□ 2.01
RARA-204ENST00000394089 CCDC102BQ68D86 513 aa27.6■■■□□ 2.01
RARA-204ENST00000394089 BSDC1Q9NW68 430 aaPredicted RBP27.6■■■□□ 2.01
RARA-204ENST00000394089 CHRNDQ07001 517 aa27.6■■■□□ 2.01
RARA-204ENST00000394089 PRPF40BQ6NWY9 871 aaKnown RBP27.6■■■□□ 2.01
RARA-204ENST00000394089 DDX49Q9Y6V7 483 aaKnown RBP27.6■■■□□ 2.01
RARA-204ENST00000394089 COL4A1P02462 1669 aa27.6■■■□□ 2.01
RARA-204ENST00000394089 MCAMP43121 646 aa27.59■■■□□ 2.01
RARA-204ENST00000394089 ZAP70P43403 619 aa27.59■■■□□ 2.01
RARA-204ENST00000394089 CHGBP05060 677 aa27.58■■■□□ 2.01
RARA-204ENST00000394089 ZFYP08048 801 aaPredicted RBP27.58■■■□□ 2.01
RARA-204ENST00000394089 KCNJ4P48050 445 aa27.58■■■□□ 2.01
RARA-204ENST00000394089 CREB3L3Q68CJ9 461 aa27.58■■■□□ 2.01
RARA-204ENST00000394089 SEC62Q99442 399 aaKnown RBP27.58■■■□□ 2.01
RARA-204ENST00000394089 TM6SF1Q9BZW5 370 aa27.58■■■□□ 2.01
RARA-204ENST00000394089 CYP2E1P05181 493 aaPredicted RBP27.57■■■□□ 2
RARA-204ENST00000394089 PHKA1P46020 1223 aa27.57■■■□□ 2
RARA-204ENST00000394089 AKAP11Q9UKA4 1901 aa27.57■■■□□ 2
RARA-204ENST00000394089 GYS1P13807 737 aa27.57■■■□□ 2
RARA-204ENST00000394089 ZKSCAN1P17029 563 aaPredicted RBP27.57■■■□□ 2
RARA-204ENST00000394089 ZKSCAN5Q9Y2L8 839 aa27.57■■■□□ 2
RARA-204ENST00000394089 R3HCC1Q9Y3T6 440 aaKnown RBP27.57■■■□□ 2
RARA-204ENST00000394089 TTF1Q15361 905 aaPredicted RBP27.56■■■□□ 2
RARA-204ENST00000394089 RNF20Q5VTR2 975 aa27.56■■■□□ 2
RARA-204ENST00000394089 UPF3BQ9BZI7 483 aaKnown RBP27.56■■■□□ 2
RARA-204ENST00000394089 SLC27A2O14975 620 aa27.55■■■□□ 2
RARA-204ENST00000394089 PODXL2Q9NZ53 605 aa27.55■■■□□ 2
RARA-204ENST00000394089 CELF1Q92879 486 aaKnown RBP27.55■■■□□ 2
RARA-204ENST00000394089 HMG20BQ9P0W2 317 aa27.55■■■□□ 2
RARA-204ENST00000394089 UQCRHLA0A096LP55 91 aa27.54■■■□□ 2
RARA-204ENST00000394089 UQCRHP07919 91 aa27.54■■■□□ 2
RARA-204ENST00000394089 RBM10P98175 930 aaKnown RBP27.54■■■□□ 2
RARA-204ENST00000394089 PI16Q6UXB8 463 aa27.54■■■□□ 2
RARA-204ENST00000394089 CCDC129Q6ZRS4 1044 aa27.54■■■□□ 2
RARA-204ENST00000394089 U3KPZ7 1027 aaPredicted RBP27.54■■■□□ 2
RARA-204ENST00000394089 APBA3O96018 575 aa27.53■■■□□ 2
RARA-204ENST00000394089 RPS8P62241 208 aaKnown RBP27.53■■■□□ 2
RARA-204ENST00000394089 NUCB2P80303 420 aa27.53■■■□□ 2
RARA-204ENST00000394089 A0A1B0GUL6 1792 aa27.53■■■□□ 2
RARA-204ENST00000394089 ZSCAN23Q3MJ62 389 aa27.53■■■□□ 2
RARA-204ENST00000394089 TSGA10IPQ3SY00 556 aa27.53■■■□□ 2
RARA-204ENST00000394089 CNBD1Q8NA66 436 aa27.53■■■□□ 2
RARA-204ENST00000394089 TTC14Q96N46 770 aa27.53■■■□□ 2
RARA-204ENST00000394089 MINPP1Q9UNW1 487 aa27.53■■■□□ 2
RARA-204ENST00000394089 SNAP23O00161 211 aa27.52■■■□□ 2
RARA-204ENST00000394089 NPHP1O15259 732 aa27.52■■■□□ 2
RARA-204ENST00000394089 TM4SF1P30408 202 aa27.52■■■□□ 2
RARA-204ENST00000394089 UBE4AQ14139 1066 aa27.52■■■□□ 2
RARA-204ENST00000394089 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms