RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 LRRC59Q96AG4 307 aaKnown RBP13.43□□□□□ -0.26
PDCD4-202ENST00000393104 BICC1Q9H694 974 aaKnown RBP13.43□□□□□ -0.26
PDCD4-202ENST00000393104 HOXB7P09629 217 aa13.43□□□□□ -0.26
PDCD4-202ENST00000393104 USP28Q96RU2 1077 aa13.43□□□□□ -0.26
PDCD4-202ENST00000393104 TOGARAM1Q9Y4F4 1720 aa13.43□□□□□ -0.26
PDCD4-202ENST00000393104 FDPSP14324 419 aaKnown RBP13.43□□□□□ -0.26
PDCD4-202ENST00000393104 RFX5P48382 616 aaPredicted RBP13.43□□□□□ -0.26
PDCD4-202ENST00000393104 TPD52L1Q16890 204 aaPredicted RBP13.43□□□□□ -0.26
PDCD4-202ENST00000393104 FMR1NBQ8N0W7 255 aaPredicted RBP13.43□□□□□ -0.26
PDCD4-202ENST00000393104 MAP3K2Q9Y2U5 619 aa13.43□□□□□ -0.26
PDCD4-202ENST00000393104 CHAF1AQ13111 956 aaPredicted RBP13.42□□□□□ -0.26
PDCD4-202ENST00000393104 TRMT1Q9NXH9 659 aaKnown RBP13.42□□□□□ -0.26
PDCD4-202ENST00000393104 CCDC129Q6ZRS4 1044 aa13.42□□□□□ -0.26
PDCD4-202ENST00000393104 FOXP2O15409 715 aa13.42□□□□□ -0.26
PDCD4-202ENST00000393104 PPP1R13BQ96KQ4 1090 aa13.42□□□□□ -0.26
PDCD4-202ENST00000393104 ERCC6LQ2NKX8 1250 aa13.41□□□□□ -0.26
PDCD4-202ENST00000393104 CLASRPQ8N2M8 674 aaKnown RBP13.41□□□□□ -0.26
PDCD4-202ENST00000393104 BOLA2Q9H3K6 86 aa13.41□□□□□ -0.26
PDCD4-202ENST00000393104 CYP2C19P33261 490 aa13.41□□□□□ -0.26
PDCD4-202ENST00000393104 EXOSC10Q01780 885 aaKnown RBP13.41□□□□□ -0.26
PDCD4-202ENST00000393104 BLOC1S2Q6QNY1 142 aa13.41□□□□□ -0.26
PDCD4-202ENST00000393104 ERO1AQ96HE7 468 aa13.41□□□□□ -0.26
PDCD4-202ENST00000393104 DBNLQ9UJU6 430 aaKnown RBP13.41□□□□□ -0.26
PDCD4-202ENST00000393104 CLCN6P51797 869 aa13.41□□□□□ -0.26
PDCD4-202ENST00000393104 RUFY2Q8WXA3 655 aa13.41□□□□□ -0.26
PDCD4-202ENST00000393104 TMX1Q9H3N1 280 aa13.41□□□□□ -0.26
PDCD4-202ENST00000393104 KDM6AO15550 1401 aaPredicted RBP13.4□□□□□ -0.26
PDCD4-202ENST00000393104 TMEM139Q8IV31 216 aa13.4□□□□□ -0.26
PDCD4-202ENST00000393104 KRT222Q8N1A0 295 aa13.4□□□□□ -0.26
PDCD4-202ENST00000393104 NKX2-3Q8TAU0 364 aa13.4□□□□□ -0.26
PDCD4-202ENST00000393104 CARD10Q9BWT7 1032 aa13.4□□□□□ -0.26
PDCD4-202ENST00000393104 LRRC2Q9BYS8 371 aa13.4□□□□□ -0.26
PDCD4-202ENST00000393104 SASH3O75995 380 aa13.4□□□□□ -0.26
PDCD4-202ENST00000393104 DPCR1Q3MIW9 517 aa13.4□□□□□ -0.26
PDCD4-202ENST00000393104 Q6ZUG5 572 aa13.4□□□□□ -0.26
PDCD4-202ENST00000393104 ARFGEF2Q9Y6D5 1785 aa13.4□□□□□ -0.26
PDCD4-202ENST00000393104 ZNF831Q5JPB2 1677 aa13.4□□□□□ -0.26
PDCD4-202ENST00000393104 PDCP20941 246 aa13.4□□□□□ -0.27
PDCD4-202ENST00000393104 AFDNP55196 1824 aaKnown RBP13.39□□□□□ -0.27
PDCD4-202ENST00000393104 TJP1Q07157 1748 aa13.39□□□□□ -0.27
PDCD4-202ENST00000393104 PFKFB2O60825 505 aa13.39□□□□□ -0.27
PDCD4-202ENST00000393104 CHMP4AQ9BY43 222 aa13.39□□□□□ -0.27
PDCD4-202ENST00000393104 ZKSCAN1P17029 563 aaPredicted RBP13.39□□□□□ -0.27
PDCD4-202ENST00000393104 HSP90AB4PQ58FF6 505 aa13.39□□□□□ -0.27
PDCD4-202ENST00000393104 CCAR1Q8IX12 1150 aaKnown RBP13.39□□□□□ -0.27
PDCD4-202ENST00000393104 PTPN14Q15678 1187 aa13.38□□□□□ -0.27
PDCD4-202ENST00000393104 ZNF592Q92610 1267 aa13.38□□□□□ -0.27
PDCD4-202ENST00000393104 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.38□□□□□ -0.27
PDCD4-202ENST00000393104 SLIT2O94813 1529 aa13.38□□□□□ -0.27
PDCD4-202ENST00000393104 PDIA4P13667 645 aaKnown RBP13.38□□□□□ -0.27
PDCD4-202ENST00000393104 KSR2Q6VAB6 950 aa13.38□□□□□ -0.27
PDCD4-202ENST00000393104 CEBPZQ03701 1054 aaKnown RBP13.38□□□□□ -0.27
PDCD4-202ENST00000393104 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.37□□□□□ -0.27
PDCD4-202ENST00000393104 RNMTO43148 476 aaKnown RBP13.37□□□□□ -0.27
PDCD4-202ENST00000393104 PNMA6AP0CW24 399 aaPredicted RBP13.37□□□□□ -0.27
PDCD4-202ENST00000393104 STX1AQ16623 288 aa13.37□□□□□ -0.27
PDCD4-202ENST00000393104 ZNF771Q7L3S4 317 aaPredicted RBP13.37□□□□□ -0.27
PDCD4-202ENST00000393104 DRC7Q8IY82 874 aa13.37□□□□□ -0.27
PDCD4-202ENST00000393104 AOPEPQ8N6M6 819 aa13.37□□□□□ -0.27
PDCD4-202ENST00000393104 BBXQ8WY36 941 aaPredicted RBP13.37□□□□□ -0.27
PDCD4-202ENST00000393104 PCDHA7Q9UN72 937 aa13.37□□□□□ -0.27
PDCD4-202ENST00000393104 PPFIA3O75145 1194 aa13.37□□□□□ -0.27
PDCD4-202ENST00000393104 CAVIN2O95810 425 aa13.37□□□□□ -0.27
PDCD4-202ENST00000393104 ZC3H6P61129 1189 aaKnown RBP13.37□□□□□ -0.27
PDCD4-202ENST00000393104 NKX1-1Q15270 411 aaPredicted RBP13.37□□□□□ -0.27
PDCD4-202ENST00000393104 INTS13Q9NVM9 706 aa13.37□□□□□ -0.27
PDCD4-202ENST00000393104 TATP17735 454 aaPredicted RBP13.37□□□□□ -0.27
PDCD4-202ENST00000393104 PSMA5P28066 241 aa13.37□□□□□ -0.27
PDCD4-202ENST00000393104 NDUFA8P51970 172 aa13.37□□□□□ -0.27
PDCD4-202ENST00000393104 ANKRD1Q15327 319 aa13.37□□□□□ -0.27
PDCD4-202ENST00000393104 REXO1L1PQ8IX06 675 aa13.37□□□□□ -0.27
PDCD4-202ENST00000393104 XPO4Q9C0E2 1151 aaKnown RBP13.37□□□□□ -0.27
PDCD4-202ENST00000393104 GRM8O00222 908 aa13.36□□□□□ -0.27
PDCD4-202ENST00000393104 TOM1O60784 492 aa13.36□□□□□ -0.27
PDCD4-202ENST00000393104 SLU7O95391 586 aaKnown RBP13.36□□□□□ -0.27
PDCD4-202ENST00000393104 NAA16Q6N069 864 aaPredicted RBP13.36□□□□□ -0.27
PDCD4-202ENST00000393104 LMOD2Q6P5Q4 547 aa13.36□□□□□ -0.27
PDCD4-202ENST00000393104 FILIP1Q7Z7B0 1213 aa13.36□□□□□ -0.27
PDCD4-202ENST00000393104 DPF2Q92785 391 aa13.36□□□□□ -0.27
PDCD4-202ENST00000393104 EPC1Q9H2F5 836 aa13.36□□□□□ -0.27
PDCD4-202ENST00000393104 NCOA5Q9HCD5 579 aaKnown RBP13.36□□□□□ -0.27
PDCD4-202ENST00000393104 HMG20BQ9P0W2 317 aa13.36□□□□□ -0.27
PDCD4-202ENST00000393104 ITGB4P16144 1822 aa13.36□□□□□ -0.27
PDCD4-202ENST00000393104 KCNJ6P48051 423 aa13.36□□□□□ -0.27
PDCD4-202ENST00000393104 BICD2Q8TD16 824 aa13.36□□□□□ -0.27
PDCD4-202ENST00000393104 LTV1Q96GA3 475 aaPredicted RBP13.36□□□□□ -0.27
PDCD4-202ENST00000393104 NEK1Q96PY6 1258 aa13.36□□□□□ -0.27
PDCD4-202ENST00000393104 FAM160A1Q05DH4 1040 aa13.36□□□□□ -0.27
PDCD4-202ENST00000393104 BPIFA3Q9BQP9 254 aa13.36□□□□□ -0.27
PDCD4-202ENST00000393104 TNS2Q63HR2 1409 aa13.35□□□□□ -0.27
PDCD4-202ENST00000393104 MROH7-TTC4A0A0A0MT08 1334 aa13.35□□□□□ -0.27
PDCD4-202ENST00000393104 NEMFO60524 1076 aa13.35□□□□□ -0.27
PDCD4-202ENST00000393104 PTPN12Q05209 780 aaKnown RBP13.35□□□□□ -0.27
PDCD4-202ENST00000393104 AXDND1Q5T1B0 1012 aaPredicted RBP13.35□□□□□ -0.27
PDCD4-202ENST00000393104 ZNF530Q6P9A1 599 aaPredicted RBP13.35□□□□□ -0.27
PDCD4-202ENST00000393104 ZSCAN16Q9H4T2 348 aaPredicted RBP13.35□□□□□ -0.27
PDCD4-202ENST00000393104 GPHNQ9NQX3 736 aaPredicted RBP13.35□□□□□ -0.27
PDCD4-202ENST00000393104 MPRIPQ6WCQ1 1025 aa13.35□□□□□ -0.27
PDCD4-202ENST00000393104 GJB4Q9NTQ9 266 aa13.35□□□□□ -0.27
PDCD4-202ENST00000393104 RREB1Q92766 1687 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms