RNA–Protein interactions for RNA: ENST00000392784.6

USP30-203, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 2 BASIC

Gene USP30, Length 2,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-203ENST00000392784 TTLL5Q6EMB2 1281 aa11.12□□□□□ -0.63
USP30-203ENST00000392784 CCDC24Q8N4L8 307 aa11.12□□□□□ -0.63
USP30-203ENST00000392784 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.12□□□□□ -0.63
USP30-203ENST00000392784 RPS6KB1P23443 525 aa11.12□□□□□ -0.63
USP30-203ENST00000392784 LRRC2Q9BYS8 371 aa11.12□□□□□ -0.63
USP30-203ENST00000392784 C4AP0C0L4 1744 aa11.11□□□□□ -0.63
USP30-203ENST00000392784 C4BP0C0L5 1744 aa11.11□□□□□ -0.63
USP30-203ENST00000392784 CNTNAP4Q9C0A0 1308 aa11.11□□□□□ -0.63
USP30-203ENST00000392784 GNPATO15228 680 aa11.11□□□□□ -0.63
USP30-203ENST00000392784 HSPD1P10809 573 aaKnown RBP11.11□□□□□ -0.63
USP30-203ENST00000392784 FGFR2P21802 821 aa11.11□□□□□ -0.63
USP30-203ENST00000392784 RNF20Q5VTR2 975 aa11.11□□□□□ -0.63
USP30-203ENST00000392784 CCDC102BQ68D86 513 aa11.11□□□□□ -0.63
USP30-203ENST00000392784 BLOC1S2Q6QNY1 142 aa11.11□□□□□ -0.63
USP30-203ENST00000392784 PIH1D3Q9NQM4 214 aaKnown RBP11.11□□□□□ -0.63
USP30-203ENST00000392784 HELLSQ9NRZ9 838 aa11.11□□□□□ -0.63
USP30-203ENST00000392784 ABCC12Q96J65 1359 aa11.11□□□□□ -0.63
USP30-203ENST00000392784 PUS7LQ9H0K6 701 aaKnown RBP11.11□□□□□ -0.63
USP30-203ENST00000392784 LMBRD1Q9NUN5 540 aa11.11□□□□□ -0.63
USP30-203ENST00000392784 CCNL1Q9UK58 526 aaPredicted RBP11.11□□□□□ -0.63
USP30-203ENST00000392784 U3KPZ7 1027 aaPredicted RBP11.11□□□□□ -0.63
USP30-203ENST00000392784 WASHC4Q2M389 1173 aa11.1□□□□□ -0.63
USP30-203ENST00000392784 TSGA10IPQ3SY00 556 aa11.1□□□□□ -0.63
USP30-203ENST00000392784 HMG20BQ9P0W2 317 aa11.1□□□□□ -0.63
USP30-203ENST00000392784 BRWD3Q6RI45 1802 aa11.1□□□□□ -0.63
USP30-203ENST00000392784 STK3Q13188 491 aa11.1□□□□□ -0.63
USP30-203ENST00000392784 PUM3Q15397 648 aaKnown RBP11.1□□□□□ -0.63
USP30-203ENST00000392784 CCDC152Q4G0S7 254 aa11.1□□□□□ -0.63
USP30-203ENST00000392784 SEPT12Q8IYM1 358 aa11.1□□□□□ -0.63
USP30-203ENST00000392784 AK7Q96M32 723 aa11.1□□□□□ -0.63
USP30-203ENST00000392784 MPHOSPH8Q99549 860 aa11.1□□□□□ -0.63
USP30-203ENST00000392784 ZNF652Q9Y2D9 606 aa11.1□□□□□ -0.63
USP30-203ENST00000392784 MROH5Q6ZUA9 1318 aa11.09□□□□□ -0.63
USP30-203ENST00000392784 PSMA5P28066 241 aa11.09□□□□□ -0.63
USP30-203ENST00000392784 SLC51AQ86UW1 340 aa11.09□□□□□ -0.63
USP30-203ENST00000392784 ATRNO75882 1429 aa11.09□□□□□ -0.63
USP30-203ENST00000392784 DOCK2Q92608 1830 aa11.09□□□□□ -0.63
USP30-203ENST00000392784 COL24A1Q17RW2 1714 aa11.09□□□□□ -0.63
USP30-203ENST00000392784 PRPF40AO75400 957 aaKnown RBP11.09□□□□□ -0.63
USP30-203ENST00000392784 RPS6KA4O75676 772 aa11.09□□□□□ -0.63
USP30-203ENST00000392784 PHF14O94880 888 aa11.09□□□□□ -0.63
USP30-203ENST00000392784 GJB2P29033 226 aa11.09□□□□□ -0.63
USP30-203ENST00000392784 CLEC4GQ6UXB4 293 aa11.09□□□□□ -0.63
USP30-203ENST00000392784 LPIN2Q92539 896 aa11.09□□□□□ -0.63
USP30-203ENST00000392784 NEK1Q96PY6 1258 aa11.09□□□□□ -0.63
USP30-203ENST00000392784 DSCC1Q9BVC3 393 aa11.09□□□□□ -0.63
USP30-203ENST00000392784 WWC3Q9ULE0 1092 aa11.09□□□□□ -0.63
USP30-203ENST00000392784 NSFL1CQ9UNZ2 370 aaKnown RBP11.09□□□□□ -0.63
USP30-203ENST00000392784 IDH1O75874 414 aaKnown RBP11.08□□□□□ -0.64
USP30-203ENST00000392784 SYT1P21579 422 aa11.08□□□□□ -0.64
USP30-203ENST00000392784 ARID4AP29374 1257 aaPredicted RBP11.08□□□□□ -0.64
USP30-203ENST00000392784 BCAMP50895 628 aa11.08□□□□□ -0.64
USP30-203ENST00000392784 HAND2P61296 217 aa11.08□□□□□ -0.64
USP30-203ENST00000392784 CHRNDQ07001 517 aa11.08□□□□□ -0.64
USP30-203ENST00000392784 RASGRF1Q13972 1273 aa11.08□□□□□ -0.64
USP30-203ENST00000392784 CHST3Q7LGC8 479 aa11.08□□□□□ -0.64
USP30-203ENST00000392784 GDPD2Q9HCC8 539 aa11.08□□□□□ -0.64
USP30-203ENST00000392784 LRRC4BQ9NT99 713 aa11.08□□□□□ -0.64
USP30-203ENST00000392784 SMC3Q9UQE7 1217 aa11.08□□□□□ -0.64
USP30-203ENST00000392784 Q6ZUG5 572 aa11.08□□□□□ -0.64
USP30-203ENST00000392784 ARHGEF1Q92888 912 aaKnown RBP11.08□□□□□ -0.64
USP30-203ENST00000392784 NARFQ9UHQ1 456 aa11.08□□□□□ -0.64
USP30-203ENST00000392784 BRPF3Q9ULD4 1205 aa11.08□□□□□ -0.64
USP30-203ENST00000392784 IQSEC3Q9UPP2 1182 aaPredicted RBP11.08□□□□□ -0.64
USP30-203ENST00000392784 DDX49Q9Y6V7 483 aaKnown RBP11.08□□□□□ -0.64
USP30-203ENST00000392784 TNRC6CQ9HCJ0 1690 aaKnown RBP11.07□□□□□ -0.64
USP30-203ENST00000392784 RTL9Q8NET4 1388 aa11.07□□□□□ -0.64
USP30-203ENST00000392784 IGHMBP2P38935 993 aaKnown RBP11.07□□□□□ -0.64
USP30-203ENST00000392784 SLC9C2Q5TAH2 1124 aa11.07□□□□□ -0.64
USP30-203ENST00000392784 GPT2Q8TD30 523 aa11.07□□□□□ -0.64
USP30-203ENST00000392784 APPBP2Q92624 585 aa11.07□□□□□ -0.64
USP30-203ENST00000392784 E7EWF7 191 aa11.07□□□□□ -0.64
USP30-203ENST00000392784 GOLGA6L22H0YM25 854 aa11.07□□□□□ -0.64
USP30-203ENST00000392784 GPAA1O43292 621 aa11.07□□□□□ -0.64
USP30-203ENST00000392784 SLC5A1P13866 664 aa11.07□□□□□ -0.64
USP30-203ENST00000392784 ADD2P35612 726 aa11.07□□□□□ -0.64
USP30-203ENST00000392784 RC3H1Q5TC82 1133 aaKnown RBP11.07□□□□□ -0.64
USP30-203ENST00000392784 GAS2L3Q86XJ1 694 aa11.07□□□□□ -0.64
USP30-203ENST00000392784 NKX2-3Q8TAU0 364 aa11.07□□□□□ -0.64
USP30-203ENST00000392784 CELF1Q92879 486 aaKnown RBP11.07□□□□□ -0.64
USP30-203ENST00000392784 ZNF512BQ96KM6 892 aaPredicted RBP11.07□□□□□ -0.64
USP30-203ENST00000392784 ZSCAN31Q96LW9 406 aaPredicted RBP11.07□□□□□ -0.64
USP30-203ENST00000392784 SH2B1Q9NRF2 756 aaPredicted RBP11.07□□□□□ -0.64
USP30-203ENST00000392784 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.07□□□□□ -0.64
USP30-203ENST00000392784 STX6O43752 255 aa11.06□□□□□ -0.64
USP30-203ENST00000392784 KRT32Q14532 448 aa11.06□□□□□ -0.64
USP30-203ENST00000392784 GPHNQ9NQX3 736 aaPredicted RBP11.06□□□□□ -0.64
USP30-203ENST00000392784 RBM27Q9P2N5 1060 aaKnown RBP11.06□□□□□ -0.64
USP30-203ENST00000392784 DENND2AQ9ULE3 1009 aa11.06□□□□□ -0.64
USP30-203ENST00000392784 ZNF532Q9HCE3 1301 aa11.06□□□□□ -0.64
USP30-203ENST00000392784 FSD2A1L4K1 749 aa11.06□□□□□ -0.64
USP30-203ENST00000392784 ONECUT3O60422 494 aaPredicted RBP11.06□□□□□ -0.64
USP30-203ENST00000392784 FGAP02671 866 aa11.06□□□□□ -0.64
USP30-203ENST00000392784 PDE6AP16499 860 aa11.06□□□□□ -0.64
USP30-203ENST00000392784 NCLP19338 710 aaKnown RBP11.06□□□□□ -0.64
USP30-203ENST00000392784 SPATA5Q8NB90 893 aa11.06□□□□□ -0.64
USP30-203ENST00000392784 BRF1Q92994 677 aa11.06□□□□□ -0.64
USP30-203ENST00000392784 QTRT2Q9H974 415 aaKnown RBP11.06□□□□□ -0.64
USP30-203ENST00000392784 TRPC5Q9UL62 973 aaPredicted RBP11.06□□□□□ -0.64
USP30-203ENST00000392784 RTCBQ9Y3I0 505 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms