RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 SCAND2PQ9GZW5 306 aaPredicted RBP12.75□□□□□ -0.37
BRF1-204ENST00000392557 KCNF1Q9H3M0 494 aa12.75□□□□□ -0.37
BRF1-204ENST00000392557 PKD1L3Q7Z443 1732 aa12.75□□□□□ -0.37
BRF1-204ENST00000392557 HIP1O00291 1037 aa12.74□□□□□ -0.37
BRF1-204ENST00000392557 GUCY1B3Q02153 619 aa12.74□□□□□ -0.37
BRF1-204ENST00000392557 TCIRG1Q13488 830 aa12.74□□□□□ -0.37
BRF1-204ENST00000392557 SMAP1Q8IYB5 467 aaPredicted RBP12.74□□□□□ -0.37
BRF1-204ENST00000392557 CBX8Q9HC52 389 aa12.74□□□□□ -0.37
BRF1-204ENST00000392557 ZSWIM6Q9HCJ5 1215 aa12.74□□□□□ -0.37
BRF1-204ENST00000392557 AFDNP55196 1824 aaKnown RBP12.74□□□□□ -0.37
BRF1-204ENST00000392557 SLC27A2O14975 620 aa12.74□□□□□ -0.37
BRF1-204ENST00000392557 JAK2O60674 1132 aa12.74□□□□□ -0.37
BRF1-204ENST00000392557 ZNF710Q8N1W2 664 aa12.74□□□□□ -0.37
BRF1-204ENST00000392557 CEP126Q9P2H0 1117 aa12.74□□□□□ -0.37
BRF1-204ENST00000392557 ZNF771Q7L3S4 317 aaPredicted RBP12.74□□□□□ -0.37
BRF1-204ENST00000392557 CCDC112Q8NEF3 446 aa12.74□□□□□ -0.37
BRF1-204ENST00000392557 TRMT1Q9NXH9 659 aaKnown RBP12.74□□□□□ -0.37
BRF1-204ENST00000392557 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.74□□□□□ -0.37
BRF1-204ENST00000392557 V9GYY5 206 aaPredicted RBP12.74□□□□□ -0.37
BRF1-204ENST00000392557 ANKRD1Q15327 319 aa12.73□□□□□ -0.37
BRF1-204ENST00000392557 DDB1Q16531 1140 aa12.73□□□□□ -0.37
BRF1-204ENST00000392557 TRMT112Q9UI30 125 aaKnown RBP12.73□□□□□ -0.37
BRF1-204ENST00000392557 PARP4Q9UKK3 1724 aaKnown RBP12.73□□□□□ -0.37
BRF1-204ENST00000392557 A0A087WWV3 80 aa12.73□□□□□ -0.37
BRF1-204ENST00000392557 NR1I2O75469 434 aa12.73□□□□□ -0.37
BRF1-204ENST00000392557 RAB11FIP4Q86YS3 637 aa12.73□□□□□ -0.37
BRF1-204ENST00000392557 MRVI1Q9Y6F6 885 aa12.73□□□□□ -0.37
BRF1-204ENST00000392557 TAF6LQ9Y6J9 622 aa12.73□□□□□ -0.37
BRF1-204ENST00000392557 A0A1B0GUL7 405 aa12.73□□□□□ -0.37
BRF1-204ENST00000392557 EYA2O00167 538 aa12.73□□□□□ -0.37
BRF1-204ENST00000392557 ATP2B3Q16720 1220 aa12.73□□□□□ -0.37
BRF1-204ENST00000392557 BRF1Q92994 677 aa12.73□□□□□ -0.37
BRF1-204ENST00000392557 TEX13AQ9BXU3 409 aaPredicted RBP12.73□□□□□ -0.37
BRF1-204ENST00000392557 IFIT1P09914 478 aaKnown RBP12.72□□□□□ -0.37
BRF1-204ENST00000392557 ATP5JP18859 108 aa12.72□□□□□ -0.37
BRF1-204ENST00000392557 IL15P40933 162 aaPredicted RBP12.72□□□□□ -0.37
BRF1-204ENST00000392557 ATG9AQ7Z3C6 839 aa12.72□□□□□ -0.37
BRF1-204ENST00000392557 ERCC4Q92889 916 aaPredicted RBP12.72□□□□□ -0.37
BRF1-204ENST00000392557 SLC4A9Q96Q91 983 aa12.72□□□□□ -0.37
BRF1-204ENST00000392557 IFIT5Q13325 482 aaKnown RBP12.72□□□□□ -0.37
BRF1-204ENST00000392557 ABCC6O95255 1503 aa12.72□□□□□ -0.37
BRF1-204ENST00000392557 CCT2P78371 535 aaKnown RBP12.71□□□□□ -0.37
BRF1-204ENST00000392557 HSP90AB3PQ58FF7 597 aa12.71□□□□□ -0.37
BRF1-204ENST00000392557 CCDC73Q6ZRK6 1079 aa12.71□□□□□ -0.37
BRF1-204ENST00000392557 STK11IPQ8N1F8 1099 aa12.71□□□□□ -0.37
BRF1-204ENST00000392557 EPB41L2O43491 1005 aaKnown RBP12.71□□□□□ -0.37
BRF1-204ENST00000392557 ME1P48163 572 aa12.71□□□□□ -0.37
BRF1-204ENST00000392557 SF3A1Q15459 793 aaKnown RBP12.71□□□□□ -0.37
BRF1-204ENST00000392557 LEO1Q8WVC0 666 aaPredicted RBP12.71□□□□□ -0.37
BRF1-204ENST00000392557 CNNM1Q9NRU3 951 aa12.71□□□□□ -0.37
BRF1-204ENST00000392557 DDX19AQ9NUU7 478 aaKnown RBP12.71□□□□□ -0.37
BRF1-204ENST00000392557 NECTIN1Q15223 517 aa12.71□□□□□ -0.38
BRF1-204ENST00000392557 DZIP3Q86Y13 1208 aaKnown RBP12.71□□□□□ -0.38
BRF1-204ENST00000392557 ARFGEF2Q9Y6D5 1785 aa12.71□□□□□ -0.38
BRF1-204ENST00000392557 KCPQ6ZWJ8 1503 aa12.71□□□□□ -0.38
BRF1-204ENST00000392557 ADORA1P30542 326 aa12.7□□□□□ -0.38
BRF1-204ENST00000392557 ATP6V1AP38606 617 aa12.7□□□□□ -0.38
BRF1-204ENST00000392557 KCNQ4P56696 695 aa12.7□□□□□ -0.38
BRF1-204ENST00000392557 NAA30Q147X3 362 aaPredicted RBP12.7□□□□□ -0.38
BRF1-204ENST00000392557 TTC39AQ5SRH9 613 aa12.7□□□□□ -0.38
BRF1-204ENST00000392557 SDF4Q9BRK5 362 aa12.7□□□□□ -0.38
BRF1-204ENST00000392557 PAG1Q9NWQ8 432 aa12.7□□□□□ -0.38
BRF1-204ENST00000392557 WASHC4Q2M389 1173 aa12.7□□□□□ -0.38
BRF1-204ENST00000392557 METTL24Q5JXM2 366 aa12.7□□□□□ -0.38
BRF1-204ENST00000392557 LDHAL6AQ6ZMR3 332 aa12.7□□□□□ -0.38
BRF1-204ENST00000392557 Q6ZUG5 572 aa12.7□□□□□ -0.38
BRF1-204ENST00000392557 ISCA1Q9BUE6 129 aa12.7□□□□□ -0.38
BRF1-204ENST00000392557 SPTLC3Q9NUV7 552 aa12.7□□□□□ -0.38
BRF1-204ENST00000392557 TUBGCP6Q96RT7 1819 aa12.7□□□□□ -0.38
BRF1-204ENST00000392557 KINO60870 393 aaKnown RBP12.7□□□□□ -0.38
BRF1-204ENST00000392557 RPS6KB1P23443 525 aa12.7□□□□□ -0.38
BRF1-204ENST00000392557 MAP4K1Q92918 833 aa12.7□□□□□ -0.38
BRF1-204ENST00000392557 TM6SF1Q9BZW5 370 aa12.7□□□□□ -0.38
BRF1-204ENST00000392557 MAP3K15Q6ZN16 1313 aa12.69□□□□□ -0.38
BRF1-204ENST00000392557 HELBQ8NG08 1087 aaPredicted RBP12.69□□□□□ -0.38
BRF1-204ENST00000392557 NEK1Q96PY6 1258 aa12.69□□□□□ -0.38
BRF1-204ENST00000392557 IRS4O14654 1257 aaPredicted RBP12.69□□□□□ -0.38
BRF1-204ENST00000392557 CYP19A1P11511 503 aaPredicted RBP12.69□□□□□ -0.38
BRF1-204ENST00000392557 ST3GAL1Q11201 340 aa12.69□□□□□ -0.38
BRF1-204ENST00000392557 GIGYF2Q6Y7W6 1299 aaKnown RBP12.69□□□□□ -0.38
BRF1-204ENST00000392557 FUCA2Q9BTY2 467 aa12.69□□□□□ -0.38
BRF1-204ENST00000392557 GREM2Q9H772 168 aa12.69□□□□□ -0.38
BRF1-204ENST00000392557 ZNF75DP51815 510 aa12.69□□□□□ -0.38
BRF1-204ENST00000392557 CCDC158Q5M9N0 1113 aa12.69□□□□□ -0.38
BRF1-204ENST00000392557 PI16Q6UXB8 463 aa12.69□□□□□ -0.38
BRF1-204ENST00000392557 CHST3Q7LGC8 479 aa12.69□□□□□ -0.38
BRF1-204ENST00000392557 HAUS7Q99871 368 aa12.69□□□□□ -0.38
BRF1-204ENST00000392557 FTOQ9C0B1 505 aaKnown RBP eCLIP12.69□□□□□ -0.38
BRF1-204ENST00000392557 CFAP45Q9UL16 551 aa12.69□□□□□ -0.38
BRF1-204ENST00000392557 ITGA6P23229 1130 aa12.68□□□□□ -0.38
BRF1-204ENST00000392557 ZSCAN25Q6NSZ9 544 aa12.68□□□□□ -0.38
BRF1-204ENST00000392557 C8orf37Q96NL8 207 aa12.68□□□□□ -0.38
BRF1-204ENST00000392557 TAF5LO75529 589 aa12.68□□□□□ -0.38
BRF1-204ENST00000392557 MCMDC2Q4G0Z9 681 aa12.68□□□□□ -0.38
BRF1-204ENST00000392557 NLRP10Q86W26 655 aa12.68□□□□□ -0.38
BRF1-204ENST00000392557 CCAR1Q8IX12 1150 aaKnown RBP12.68□□□□□ -0.38
BRF1-204ENST00000392557 ZBTB38Q8NAP3 1195 aaPredicted RBP12.68□□□□□ -0.38
BRF1-204ENST00000392557 CHMP4CQ96CF2 233 aa12.68□□□□□ -0.38
BRF1-204ENST00000392557 PRDM4Q9UKN5 801 aa12.68□□□□□ -0.38
BRF1-204ENST00000392557 ARID5BQ14865 1188 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms