RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 ZAP70P43403 619 aa13.75□□□□□ -0.21
SMARCAL1-203ENST00000392128 NBR1Q14596 966 aa13.75□□□□□ -0.21
SMARCAL1-203ENST00000392128 CREB3L3Q68CJ9 461 aa13.75□□□□□ -0.21
SMARCAL1-203ENST00000392128 TM6SF1Q9BZW5 370 aa13.75□□□□□ -0.21
SMARCAL1-203ENST00000392128 TNS1Q9HBL0 1735 aaKnown RBP13.75□□□□□ -0.21
SMARCAL1-203ENST00000392128 ZKSCAN1P17029 563 aaPredicted RBP13.74□□□□□ -0.21
SMARCAL1-203ENST00000392128 PHKA1P46020 1223 aa13.74□□□□□ -0.21
SMARCAL1-203ENST00000392128 KCNJ4P48050 445 aa13.74□□□□□ -0.21
SMARCAL1-203ENST00000392128 RNF20Q5VTR2 975 aa13.74□□□□□ -0.21
SMARCAL1-203ENST00000392128 SEC62Q99442 399 aaKnown RBP13.74□□□□□ -0.21
SMARCAL1-203ENST00000392128 HMG20BQ9P0W2 317 aa13.74□□□□□ -0.21
SMARCAL1-203ENST00000392128 DOCK2Q92608 1830 aa13.74□□□□□ -0.21
SMARCAL1-203ENST00000392128 GYS1P13807 737 aa13.74□□□□□ -0.21
SMARCAL1-203ENST00000392128 TTF1Q15361 905 aaPredicted RBP13.74□□□□□ -0.21
SMARCAL1-203ENST00000392128 NFKBIBQ15653 356 aa13.74□□□□□ -0.21
SMARCAL1-203ENST00000392128 UPF3BQ9BZI7 483 aaKnown RBP13.74□□□□□ -0.21
SMARCAL1-203ENST00000392128 SLC27A2O14975 620 aa13.73□□□□□ -0.21
SMARCAL1-203ENST00000392128 MYO5AQ9Y4I1 1855 aaKnown RBP13.73□□□□□ -0.21
SMARCAL1-203ENST00000392128 TSGA10IPQ3SY00 556 aa13.73□□□□□ -0.21
SMARCAL1-203ENST00000392128 PI16Q6UXB8 463 aa13.73□□□□□ -0.21
SMARCAL1-203ENST00000392128 CCDC129Q6ZRS4 1044 aa13.73□□□□□ -0.21
SMARCAL1-203ENST00000392128 CELF1Q92879 486 aaKnown RBP13.73□□□□□ -0.21
SMARCAL1-203ENST00000392128 TTC14Q96N46 770 aa13.73□□□□□ -0.21
SMARCAL1-203ENST00000392128 U3KPZ7 1027 aaPredicted RBP13.73□□□□□ -0.21
SMARCAL1-203ENST00000392128 RPAP1Q9BWH6 1393 aaPredicted RBP13.72□□□□□ -0.21
SMARCAL1-203ENST00000392128 CNBD1Q8NA66 436 aa13.72□□□□□ -0.21
SMARCAL1-203ENST00000392128 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.72□□□□□ -0.21
SMARCAL1-203ENST00000392128 ZSWIM6Q9HCJ5 1215 aa13.72□□□□□ -0.21
SMARCAL1-203ENST00000392128 MAST3O60307 1309 aa13.72□□□□□ -0.21
SMARCAL1-203ENST00000392128 CYP2E1P05181 493 aaPredicted RBP13.72□□□□□ -0.21
SMARCAL1-203ENST00000392128 RPS8P62241 208 aaKnown RBP13.72□□□□□ -0.21
SMARCAL1-203ENST00000392128 UBE4AQ14139 1066 aa13.72□□□□□ -0.21
SMARCAL1-203ENST00000392128 TMX3Q96JJ7 454 aa13.72□□□□□ -0.21
SMARCAL1-203ENST00000392128 DSCC1Q9BVC3 393 aa13.72□□□□□ -0.21
SMARCAL1-203ENST00000392128 MINPP1Q9UNW1 487 aa13.72□□□□□ -0.21
SMARCAL1-203ENST00000392128 SNAP23O00161 211 aa13.71□□□□□ -0.21
SMARCAL1-203ENST00000392128 NPHP1O15259 732 aa13.71□□□□□ -0.21
SMARCAL1-203ENST00000392128 APBA3O96018 575 aa13.71□□□□□ -0.21
SMARCAL1-203ENST00000392128 CASTP20810 708 aaKnown RBP13.71□□□□□ -0.21
SMARCAL1-203ENST00000392128 TM4SF1P30408 202 aa13.71□□□□□ -0.21
SMARCAL1-203ENST00000392128 ADCK5Q3MIX3 580 aa13.71□□□□□ -0.21
SMARCAL1-203ENST00000392128 ZSCAN25Q6NSZ9 544 aa13.71□□□□□ -0.21
SMARCAL1-203ENST00000392128 JAKMIP1Q96N16 626 aaKnown RBP13.71□□□□□ -0.21
SMARCAL1-203ENST00000392128 PSMA5P28066 241 aa13.71□□□□□ -0.22
SMARCAL1-203ENST00000392128 CUL4AQ13619 759 aa13.71□□□□□ -0.22
SMARCAL1-203ENST00000392128 SLFNL1Q499Z3 407 aa13.71□□□□□ -0.22
SMARCAL1-203ENST00000392128 SPATA5Q8NB90 893 aa13.71□□□□□ -0.22
SMARCAL1-203ENST00000392128 APPBP2Q92624 585 aa13.71□□□□□ -0.22
SMARCAL1-203ENST00000392128 CWC22Q9HCG8 908 aaKnown RBP13.71□□□□□ -0.22
SMARCAL1-203ENST00000392128 RGS17Q9UGC6 210 aaPredicted RBP13.71□□□□□ -0.22
SMARCAL1-203ENST00000392128 M0R2C6 588 aa13.7□□□□□ -0.22
SMARCAL1-203ENST00000392128 PRR5LQ6MZQ0 368 aa13.7□□□□□ -0.22
SMARCAL1-203ENST00000392128 CCDC24Q8N4L8 307 aa13.7□□□□□ -0.22
SMARCAL1-203ENST00000392128 OSBP2Q969R2 916 aa13.7□□□□□ -0.22
SMARCAL1-203ENST00000392128 FOXD4L1Q9NU39 408 aa13.7□□□□□ -0.22
SMARCAL1-203ENST00000392128 CYP46A1Q9Y6A2 500 aa13.7□□□□□ -0.22
SMARCAL1-203ENST00000392128 RASGRF1Q13972 1273 aa13.7□□□□□ -0.22
SMARCAL1-203ENST00000392128 KRT32Q14532 448 aa13.7□□□□□ -0.22
SMARCAL1-203ENST00000392128 VPS53Q5VIR6 699 aa13.7□□□□□ -0.22
SMARCAL1-203ENST00000392128 RUFY3Q7L099 469 aa13.7□□□□□ -0.22
SMARCAL1-203ENST00000392128 AKT1S1Q96B36 256 aa13.7□□□□□ -0.22
SMARCAL1-203ENST00000392128 PIH1D3Q9NQM4 214 aaKnown RBP13.7□□□□□ -0.22
SMARCAL1-203ENST00000392128 ZNF804BA4D1E1 1349 aa13.7□□□□□ -0.22
SMARCAL1-203ENST00000392128 ADD2P35612 726 aa13.69□□□□□ -0.22
SMARCAL1-203ENST00000392128 ANKRD2Q9GZV1 360 aa13.69□□□□□ -0.22
SMARCAL1-203ENST00000392128 SERPINB2P05120 415 aa13.69□□□□□ -0.22
SMARCAL1-203ENST00000392128 HSPD1P10809 573 aaKnown RBP13.69□□□□□ -0.22
SMARCAL1-203ENST00000392128 BCAMP50895 628 aa13.69□□□□□ -0.22
SMARCAL1-203ENST00000392128 AK2P54819 239 aa13.69□□□□□ -0.22
SMARCAL1-203ENST00000392128 UBE3CQ15386 1083 aa13.69□□□□□ -0.22
SMARCAL1-203ENST00000392128 ZNF827Q17R98 1081 aa13.69□□□□□ -0.22
SMARCAL1-203ENST00000392128 WASHC4Q2M389 1173 aa13.69□□□□□ -0.22
SMARCAL1-203ENST00000392128 INTS4Q96HW7 963 aaKnown RBP13.69□□□□□ -0.22
SMARCAL1-203ENST00000392128 FRAT2O75474 233 aaPredicted RBP13.68□□□□□ -0.22
SMARCAL1-203ENST00000392128 ST5P78524 1137 aa13.68□□□□□ -0.22
SMARCAL1-203ENST00000392128 RAB3GAP1Q15042 981 aa13.68□□□□□ -0.22
SMARCAL1-203ENST00000392128 PDRG1Q9NUG6 133 aa13.68□□□□□ -0.22
SMARCAL1-203ENST00000392128 TFCP2L1Q9NZI6 479 aa13.68□□□□□ -0.22
SMARCAL1-203ENST00000392128 SLC9C2Q5TAH2 1124 aa13.68□□□□□ -0.22
SMARCAL1-203ENST00000392128 ALDH8A1Q9H2A2 487 aaPredicted RBP13.68□□□□□ -0.22
SMARCAL1-203ENST00000392128 NRXN2Q9P2S2 1712 aa13.68□□□□□ -0.22
SMARCAL1-203ENST00000392128 MYH13Q9UKX3 1938 aa13.67□□□□□ -0.22
SMARCAL1-203ENST00000392128 LAMA4Q16363 1823 aa13.67□□□□□ -0.22
SMARCAL1-203ENST00000392128 POLRMTO00411 1230 aaKnown RBP13.67□□□□□ -0.22
SMARCAL1-203ENST00000392128 CYP21A2P08686 494 aa13.67□□□□□ -0.22
SMARCAL1-203ENST00000392128 GRAPQ13588 217 aa13.67□□□□□ -0.22
SMARCAL1-203ENST00000392128 CRY2Q49AN0 593 aa13.67□□□□□ -0.22
SMARCAL1-203ENST00000392128 POTEAQ6S8J7 498 aa13.67□□□□□ -0.22
SMARCAL1-203ENST00000392128 FLAD1Q8NFF5 587 aa13.67□□□□□ -0.22
SMARCAL1-203ENST00000392128 GRAPLQ8TC17 118 aaPredicted RBP13.67□□□□□ -0.22
SMARCAL1-203ENST00000392128 PUS7LQ9H0K6 701 aaKnown RBP13.67□□□□□ -0.22
SMARCAL1-203ENST00000392128 GNL3LQ9NVN8 582 aaKnown RBP13.67□□□□□ -0.22
SMARCAL1-203ENST00000392128 LIMCH1Q9UPQ0 1083 aa13.67□□□□□ -0.22
SMARCAL1-203ENST00000392128 IDH1O75874 414 aaKnown RBP13.66□□□□□ -0.22
SMARCAL1-203ENST00000392128 CPA1P15085 419 aa13.66□□□□□ -0.22
SMARCAL1-203ENST00000392128 PDE6AP16499 860 aa13.66□□□□□ -0.22
SMARCAL1-203ENST00000392128 DDR1Q08345 913 aa13.66□□□□□ -0.22
SMARCAL1-203ENST00000392128 CAVIN4Q5BKX8 364 aa13.66□□□□□ -0.22
SMARCAL1-203ENST00000392128 BLOC1S2Q6QNY1 142 aa13.66□□□□□ -0.22
SMARCAL1-203ENST00000392128 ZGPATQ8N5A5 531 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms