RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 CALML3P27482 149 aa14.01□□□□□ -0.17
KCNQ3-201ENST00000388996 GRIPAP1Q4V328 841 aa14.01□□□□□ -0.17
KCNQ3-201ENST00000388996 SPECC1LQ69YQ0 1117 aa14.01□□□□□ -0.17
KCNQ3-201ENST00000388996 SPAG5Q96R06 1193 aa14.01□□□□□ -0.17
KCNQ3-201ENST00000388996 IL2RBP14784 551 aa14.01□□□□□ -0.17
KCNQ3-201ENST00000388996 SPAG1Q07617 926 aa14.01□□□□□ -0.17
KCNQ3-201ENST00000388996 CEP135Q66GS9 1140 aa14.01□□□□□ -0.17
KCNQ3-201ENST00000388996 TTC41PQ6P2S7 1318 aa14.01□□□□□ -0.17
KCNQ3-201ENST00000388996 POLR3GO15318 223 aaPredicted RBP14.01□□□□□ -0.17
KCNQ3-201ENST00000388996 AFMP43652 599 aa14.01□□□□□ -0.17
KCNQ3-201ENST00000388996 LMAN1P49257 510 aa14□□□□□ -0.17
KCNQ3-201ENST00000388996 F8W031 263 aaPredicted RBP14□□□□□ -0.17
KCNQ3-201ENST00000388996 CALM1P0DP23 149 aa14□□□□□ -0.17
KCNQ3-201ENST00000388996 CALM2P0DP24 149 aa14□□□□□ -0.17
KCNQ3-201ENST00000388996 CALM3P0DP25 149 aa14□□□□□ -0.17
KCNQ3-201ENST00000388996 Q6ZUG5 572 aa14□□□□□ -0.17
KCNQ3-201ENST00000388996 RTL1A6NKG5 1358 aa14□□□□□ -0.17
KCNQ3-201ENST00000388996 PRPHP41219 470 aa14□□□□□ -0.17
KCNQ3-201ENST00000388996 GNG11P61952 73 aa14□□□□□ -0.17
KCNQ3-201ENST00000388996 HOMER2Q9NSB8 354 aa14□□□□□ -0.17
KCNQ3-201ENST00000388996 SHROOM2Q13796 1616 aa14□□□□□ -0.17
KCNQ3-201ENST00000388996 MAGEB6P1A0A0J9YX57 407 aa14□□□□□ -0.17
KCNQ3-201ENST00000388996 FERP16591 822 aa14□□□□□ -0.17
KCNQ3-201ENST00000388996 PDE1AP54750 535 aa14□□□□□ -0.17
KCNQ3-201ENST00000388996 GIMAP7Q8NHV1 300 aa14□□□□□ -0.17
KCNQ3-201ENST00000388996 PHACTR2O75167 634 aa14□□□□□ -0.17
KCNQ3-201ENST00000388996 SMARCC2Q8TAQ2 1214 aa14□□□□□ -0.17
KCNQ3-201ENST00000388996 ACSBG1Q96GR2 724 aa14□□□□□ -0.17
KCNQ3-201ENST00000388996 MMRN2Q9H8L6 949 aa13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 PARD3Q8TEW0 1356 aa13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 HCLS1P14317 486 aaPredicted RBP13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 UVSSAQ2YD98 709 aa13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 NIP7Q9Y221 180 aaKnown RBP eCLIP13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 MRVI1Q9Y6F6 885 aa13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 UBAP1LF5GYI3 381 aa13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 LRRC45Q96CN5 670 aa13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 PCDH11XQ9BZA7 1347 aa13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 PCDH11YQ9BZA8 1340 aa13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 PSMA7O14818 248 aa13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 GTPBP4Q9BZE4 634 aaKnown RBP13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 SSX2IPQ9Y2D8 614 aa13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 IMPG2Q9BZV3 1241 aa13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 RRP36Q96EU6 259 aaKnown RBP13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 ATP10BO94823 1461 aa13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 SPDYE3A6NKU9 549 aa13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 KAT6AQ92794 2004 aa13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 SOS1Q07889 1333 aaPredicted RBP13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 SLC9C2Q5TAH2 1124 aa13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 COPS6Q7L5N1 327 aa13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 NLRP3Q96P20 1036 aa13.99□□□□□ -0.17
KCNQ3-201ENST00000388996 NECAB1Q8N987 351 aa13.98□□□□□ -0.17
KCNQ3-201ENST00000388996 RBM8AQ9Y5S9 174 aaKnown RBP13.98□□□□□ -0.17
KCNQ3-201ENST00000388996 TRIM75PA6NK02 468 aa13.98□□□□□ -0.17
KCNQ3-201ENST00000388996 TNNI2P48788 182 aa13.98□□□□□ -0.17
KCNQ3-201ENST00000388996 UBASH3AP57075 661 aa13.98□□□□□ -0.17
KCNQ3-201ENST00000388996 KIAA0753Q2KHM9 967 aa13.98□□□□□ -0.17
KCNQ3-201ENST00000388996 KLHL40Q2TBA0 621 aa13.98□□□□□ -0.17
KCNQ3-201ENST00000388996 ESYT1Q9BSJ8 1104 aa13.98□□□□□ -0.17
KCNQ3-201ENST00000388996 MAGEB6Q8N7X4 407 aa13.98□□□□□ -0.17
KCNQ3-201ENST00000388996 VEZTQ9HBM0 779 aa13.98□□□□□ -0.17
KCNQ3-201ENST00000388996 ZMYM4Q5VZL5 1548 aa13.98□□□□□ -0.17
KCNQ3-201ENST00000388996 ANO6Q4KMQ2 910 aa13.98□□□□□ -0.17
KCNQ3-201ENST00000388996 ISM2Q6H9L7 571 aa13.98□□□□□ -0.17
KCNQ3-201ENST00000388996 MEIS3Q99687 375 aa13.98□□□□□ -0.17
KCNQ3-201ENST00000388996 AKAP4Q5JQC9 854 aa13.98□□□□□ -0.17
KCNQ3-201ENST00000388996 TMX3Q96JJ7 454 aa13.98□□□□□ -0.17
KCNQ3-201ENST00000388996 PAXBP1Q9Y5B6 917 aa13.98□□□□□ -0.17
KCNQ3-201ENST00000388996 KRT2P35908 639 aa13.97□□□□□ -0.17
KCNQ3-201ENST00000388996 PICALMQ13492 652 aa13.97□□□□□ -0.17
KCNQ3-201ENST00000388996 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.97□□□□□ -0.17
KCNQ3-201ENST00000388996 CA8P35219 290 aa13.97□□□□□ -0.17
KCNQ3-201ENST00000388996 CYLC1P35663 651 aaPredicted RBP13.97□□□□□ -0.17
KCNQ3-201ENST00000388996 ANKRD44Q8N8A2 993 aa13.97□□□□□ -0.17
KCNQ3-201ENST00000388996 MARCKSP29966 332 aaPredicted RBP13.97□□□□□ -0.17
KCNQ3-201ENST00000388996 NMIQ13287 307 aaPredicted RBP13.97□□□□□ -0.17
KCNQ3-201ENST00000388996 SELENOOQ9BVL4 669 aa13.97□□□□□ -0.17
KCNQ3-201ENST00000388996 CTAGE9A4FU28 777 aa13.97□□□□□ -0.17
KCNQ3-201ENST00000388996 SLC39A6Q13433 755 aa13.97□□□□□ -0.17
KCNQ3-201ENST00000388996 SIRT1Q96EB6 747 aa13.97□□□□□ -0.17
KCNQ3-201ENST00000388996 ANKRD2Q9GZV1 360 aa13.97□□□□□ -0.17
KCNQ3-201ENST00000388996 FAM13AO94988 1023 aa13.97□□□□□ -0.17
KCNQ3-201ENST00000388996 POLR3AO14802 1390 aaPredicted RBP13.97□□□□□ -0.17
KCNQ3-201ENST00000388996 FAM200AQ8TCP9 573 aa13.97□□□□□ -0.17
KCNQ3-201ENST00000388996 A0A1W2PRG0 241 aa13.96□□□□□ -0.17
KCNQ3-201ENST00000388996 BICDL2A1A5D9 508 aa13.96□□□□□ -0.17
KCNQ3-201ENST00000388996 MRPS9P82933 396 aaKnown RBP13.96□□□□□ -0.17
KCNQ3-201ENST00000388996 CCDC155Q8N6L0 562 aa13.96□□□□□ -0.17
KCNQ3-201ENST00000388996 IQCGQ9H095 443 aaKnown RBP13.96□□□□□ -0.17
KCNQ3-201ENST00000388996 ABCC2Q92887 1545 aa13.96□□□□□ -0.17
KCNQ3-201ENST00000388996 RNF113AO15541 343 aaKnown RBP13.96□□□□□ -0.17
KCNQ3-201ENST00000388996 MAP1BP46821 2468 aaKnown RBP13.96□□□□□ -0.17
KCNQ3-201ENST00000388996 HSF2BPO75031 334 aa13.96□□□□□ -0.17
KCNQ3-201ENST00000388996 KIF4AO95239 1232 aa13.96□□□□□ -0.17
KCNQ3-201ENST00000388996 DDB1Q16531 1140 aa13.96□□□□□ -0.17
KCNQ3-201ENST00000388996 GIMAP6Q6P9H5 292 aa13.96□□□□□ -0.17
KCNQ3-201ENST00000388996 YTHDC2Q9H6S0 1430 aaKnown RBP13.96□□□□□ -0.18
KCNQ3-201ENST00000388996 EIF4A2Q14240 407 aaKnown RBP13.95□□□□□ -0.18
KCNQ3-201ENST00000388996 APBB1IPQ7Z5R6 666 aaPredicted RBP13.95□□□□□ -0.18
KCNQ3-201ENST00000388996 TCEANC2Q96MN5 208 aa13.95□□□□□ -0.18
KCNQ3-201ENST00000388996 EEF2P13639 858 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms