RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 SLC51AQ86UW1 340 aa15□□□□□ -0.01
CIITA-202ENST00000381835 PDE6BP35913 854 aa14.99□□□□□ -0.01
CIITA-202ENST00000381835 FSD1Q9BTV5 496 aa14.99□□□□□ -0.01
CIITA-202ENST00000381835 SNRKQ9NRH2 765 aa14.99□□□□□ -0.01
CIITA-202ENST00000381835 ARAP2Q8WZ64 1704 aa14.99□□□□□ -0.01
CIITA-202ENST00000381835 DDX11L8A8MPP1 907 aa14.99□□□□□ -0.01
CIITA-202ENST00000381835 PHKA1P46020 1223 aa14.99□□□□□ -0.01
CIITA-202ENST00000381835 FKBP4Q02790 459 aaKnown RBP eCLIP14.99□□□□□ -0.01
CIITA-202ENST00000381835 SCARF1Q14162 830 aa14.99□□□□□ -0.01
CIITA-202ENST00000381835 CCDC102BQ68D86 513 aa14.99□□□□□ -0.01
CIITA-202ENST00000381835 GOLIM4O00461 696 aa14.98□□□□□ -0.01
CIITA-202ENST00000381835 SRGNP10124 158 aa14.98□□□□□ -0.01
CIITA-202ENST00000381835 HOXA10P31260 410 aaPredicted RBP14.98□□□□□ -0.01
CIITA-202ENST00000381835 KCNJ4P48050 445 aa14.98□□□□□ -0.01
CIITA-202ENST00000381835 RBM25P49756 843 aaKnown RBP14.98□□□□□ -0.01
CIITA-202ENST00000381835 SLC16A10Q8TF71 515 aa14.98□□□□□ -0.01
CIITA-202ENST00000381835 PANK2Q9BZ23 570 aa14.98□□□□□ -0.01
CIITA-202ENST00000381835 ANKRD2Q9GZV1 360 aa14.98□□□□□ -0.01
CIITA-202ENST00000381835 GOLGB1Q14789 3259 aaKnown RBP14.98□□□□□ -0.01
CIITA-202ENST00000381835 UBE4AQ14139 1066 aa14.98□□□□□ -0.01
CIITA-202ENST00000381835 CRAMP1Q96RY5 1269 aa14.98□□□□□ -0.01
CIITA-202ENST00000381835 DIAPH3Q9NSV4 1193 aa14.98□□□□□ -0.01
CIITA-202ENST00000381835 PAG1Q9NWQ8 432 aa14.98□□□□□ -0.01
CIITA-202ENST00000381835 ANKIB1Q9P2G1 1089 aa14.98□□□□□ -0.01
CIITA-202ENST00000381835 AKAP11Q9UKA4 1901 aa14.97□□□□□ -0.01
CIITA-202ENST00000381835 BCAMP50895 628 aa14.97□□□□□ -0.01
CIITA-202ENST00000381835 PI16Q6UXB8 463 aa14.97□□□□□ -0.01
CIITA-202ENST00000381835 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.97□□□□□ -0.01
CIITA-202ENST00000381835 PKNOX2Q96KN3 472 aa14.97□□□□□ -0.01
CIITA-202ENST00000381835 ESYT1Q9BSJ8 1104 aa14.97□□□□□ -0.01
CIITA-202ENST00000381835 BBOX1O75936 387 aa14.97□□□□□ -0.01
CIITA-202ENST00000381835 ZBTB7AO95365 584 aa14.97□□□□□ -0.01
CIITA-202ENST00000381835 NPR1P16066 1061 aa14.97□□□□□ -0.01
CIITA-202ENST00000381835 MCAMP43121 646 aa14.97□□□□□ -0.01
CIITA-202ENST00000381835 MRE11P49959 708 aa14.97□□□□□ -0.01
CIITA-202ENST00000381835 R3HDM1Q15032 1099 aaKnown RBP14.97□□□□□ -0.01
CIITA-202ENST00000381835 CWC27Q6UX04 472 aaKnown RBP14.97□□□□□ -0.01
CIITA-202ENST00000381835 SNX21Q969T3 373 aa14.97□□□□□ -0.01
CIITA-202ENST00000381835 COL11A2P13942 1736 aaPredicted RBP14.96□□□□□ -0.01
CIITA-202ENST00000381835 CACNA1SQ13698 1873 aa14.96□□□□□ -0.01
CIITA-202ENST00000381835 ZNF622Q969S3 477 aaKnown RBP eCLIP14.96□□□□□ -0.01
CIITA-202ENST00000381835 ZAP70P43403 619 aa14.95□□□□□ -0.02
CIITA-202ENST00000381835 GYG1P46976 350 aa14.95□□□□□ -0.02
CIITA-202ENST00000381835 C2CD5Q86YS7 1000 aa14.95□□□□□ -0.02
CIITA-202ENST00000381835 IL25Q9H293 177 aa14.95□□□□□ -0.02
CIITA-202ENST00000381835 ZNF804BA4D1E1 1349 aa14.95□□□□□ -0.02
CIITA-202ENST00000381835 UQCRFS1P1P0C7P4 283 aa14.95□□□□□ -0.02
CIITA-202ENST00000381835 ARID4AP29374 1257 aaPredicted RBP14.95□□□□□ -0.02
CIITA-202ENST00000381835 MASTLQ96GX5 879 aa14.95□□□□□ -0.02
CIITA-202ENST00000381835 ZNF512BQ96KM6 892 aaPredicted RBP14.95□□□□□ -0.02
CIITA-202ENST00000381835 NSFL1CQ9UNZ2 370 aaKnown RBP14.95□□□□□ -0.02
CIITA-202ENST00000381835 H0YIN7 160 aa14.94□□□□□ -0.02
CIITA-202ENST00000381835 PPEF1O14829 653 aaPredicted RBP14.94□□□□□ -0.02
CIITA-202ENST00000381835 REC8O95072 547 aa14.94□□□□□ -0.02
CIITA-202ENST00000381835 KLRK1P26718 216 aa14.94□□□□□ -0.02
CIITA-202ENST00000381835 DDIT3P35638 169 aa14.94□□□□□ -0.02
CIITA-202ENST00000381835 VPS37DQ86XT2 251 aa14.94□□□□□ -0.02
CIITA-202ENST00000381835 KBTBD3Q8NAB2 608 aa14.94□□□□□ -0.02
CIITA-202ENST00000381835 IQSEC3Q9UPP2 1182 aaPredicted RBP14.94□□□□□ -0.02
CIITA-202ENST00000381835 ATF5Q9Y2D1 282 aaPredicted RBP14.94□□□□□ -0.02
CIITA-202ENST00000381835 XDHP47989 1333 aa14.94□□□□□ -0.02
CIITA-202ENST00000381835 HIP1O00291 1037 aa14.94□□□□□ -0.02
CIITA-202ENST00000381835 CHRNA5P30532 468 aa14.94□□□□□ -0.02
CIITA-202ENST00000381835 ALDH1B1P30837 517 aa14.94□□□□□ -0.02
CIITA-202ENST00000381835 GPSM2P81274 684 aa14.94□□□□□ -0.02
CIITA-202ENST00000381835 CAVIN4Q5BKX8 364 aa14.94□□□□□ -0.02
CIITA-202ENST00000381835 FAM227BQ96M60 508 aa14.94□□□□□ -0.02
CIITA-202ENST00000381835 CHGBP05060 677 aa14.93□□□□□ -0.02
CIITA-202ENST00000381835 NMIQ13287 307 aaPredicted RBP14.93□□□□□ -0.02
CIITA-202ENST00000381835 RASGRF1Q13972 1273 aa14.93□□□□□ -0.02
CIITA-202ENST00000381835 RUFY2Q8WXA3 655 aa14.93□□□□□ -0.02
CIITA-202ENST00000381835 ANO2Q9NQ90 1003 aa14.93□□□□□ -0.02
CIITA-202ENST00000381835 MYO5AQ9Y4I1 1855 aaKnown RBP14.93□□□□□ -0.02
CIITA-202ENST00000381835 PSDA5PKW4 1024 aaPredicted RBP14.93□□□□□ -0.02
CIITA-202ENST00000381835 SGSM2O43147 1006 aa14.93□□□□□ -0.02
CIITA-202ENST00000381835 TNPO1Q92973 898 aaKnown RBP14.93□□□□□ -0.02
CIITA-202ENST00000381835 FAM84BQ96KN1 310 aaPredicted RBP14.93□□□□□ -0.02
CIITA-202ENST00000381835 GRPEL1Q9HAV7 217 aa14.93□□□□□ -0.02
CIITA-202ENST00000381835 HMG20BQ9P0W2 317 aa14.93□□□□□ -0.02
CIITA-202ENST00000381835 SPATA5Q8NB90 893 aa14.92□□□□□ -0.02
CIITA-202ENST00000381835 USP26Q9BXU7 913 aa14.92□□□□□ -0.02
CIITA-202ENST00000381835 CIZ1Q9ULV3 898 aaPredicted RBP14.92□□□□□ -0.02
CIITA-202ENST00000381835 LEMD3Q9Y2U8 911 aa14.92□□□□□ -0.02
CIITA-202ENST00000381835 A0A0D9SFI3 127 aa14.92□□□□□ -0.02
CIITA-202ENST00000381835 CYP2E1P05181 493 aaPredicted RBP14.92□□□□□ -0.02
CIITA-202ENST00000381835 HSP90AA1P07900 732 aaKnown RBP14.92□□□□□ -0.02
CIITA-202ENST00000381835 TXNRD3Q86VQ6 643 aa14.92□□□□□ -0.02
CIITA-202ENST00000381835 GPR101Q96P66 508 aaPredicted RBP14.92□□□□□ -0.02
CIITA-202ENST00000381835 GBP4Q96PP9 640 aa14.92□□□□□ -0.02
CIITA-202ENST00000381835 UFL1O94874 794 aa14.91□□□□□ -0.02
CIITA-202ENST00000381835 SLFNL1Q499Z3 407 aa14.91□□□□□ -0.02
CIITA-202ENST00000381835 OLFM4Q6UX06 510 aa14.91□□□□□ -0.02
CIITA-202ENST00000381835 TMC4Q7Z404 712 aa14.91□□□□□ -0.02
CIITA-202ENST00000381835 SP8Q8IXZ3 490 aa14.91□□□□□ -0.02
CIITA-202ENST00000381835 MTFR1LQ9H019 292 aa14.91□□□□□ -0.02
CIITA-202ENST00000381835 GNL3LQ9NVN8 582 aaKnown RBP14.91□□□□□ -0.02
CIITA-202ENST00000381835 ISY1Q9ULR0 285 aaKnown RBP14.91□□□□□ -0.02
CIITA-202ENST00000381835 ATP6V0A2Q9Y487 856 aa14.91□□□□□ -0.02
CIITA-202ENST00000381835 MYH7P12883 1935 aa14.91□□□□□ -0.02
CIITA-202ENST00000381835 CLCN1P35523 988 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms