RNA–Protein interactions for RNA: ENST00000381810.7

LITAF-202, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-202ENST00000381810 ARID4AP29374 1257 aaPredicted RBP20.27■□□□□ 0.84
LITAF-202ENST00000381810 RFC4P35249 363 aa20.27■□□□□ 0.84
LITAF-202ENST00000381810 MCAMP43121 646 aa20.27■□□□□ 0.84
LITAF-202ENST00000381810 TSGA10IPQ3SY00 556 aa20.27■□□□□ 0.84
LITAF-202ENST00000381810 CCDC102BQ68D86 513 aa20.27■□□□□ 0.84
LITAF-202ENST00000381810 NOL8Q76FK4 1167 aaKnown RBP20.27■□□□□ 0.84
LITAF-202ENST00000381810 NBPF5PQ86XG9 351 aaPredicted RBP20.27■□□□□ 0.84
LITAF-202ENST00000381810 ZGPATQ8N5A5 531 aaKnown RBP20.27■□□□□ 0.84
LITAF-202ENST00000381810 MCM4P33991 863 aa20.27■□□□□ 0.83
LITAF-202ENST00000381810 NUCB2P80303 420 aa20.27■□□□□ 0.83
LITAF-202ENST00000381810 SLC27A3Q5K4L6 730 aa20.27■□□□□ 0.83
LITAF-202ENST00000381810 VPS53Q5VIR6 699 aa20.27■□□□□ 0.83
LITAF-202ENST00000381810 ANKRD18AQ8IVF6 992 aa20.27■□□□□ 0.83
LITAF-202ENST00000381810 TNPO1Q92973 898 aaKnown RBP20.27■□□□□ 0.83
LITAF-202ENST00000381810 INTS4Q96HW7 963 aaKnown RBP20.27■□□□□ 0.83
LITAF-202ENST00000381810 PDRG1Q9NUG6 133 aa20.27■□□□□ 0.83
LITAF-202ENST00000381810 PHF14O94880 888 aa20.26■□□□□ 0.83
LITAF-202ENST00000381810 PHKA1P46020 1223 aa20.26■□□□□ 0.83
LITAF-202ENST00000381810 AK2P54819 239 aa20.26■□□□□ 0.83
LITAF-202ENST00000381810 TTF1Q15361 905 aaPredicted RBP20.26■□□□□ 0.83
LITAF-202ENST00000381810 SLFNL1Q499Z3 407 aa20.26■□□□□ 0.83
LITAF-202ENST00000381810 ZNF772Q68DY9 489 aaPredicted RBP20.26■□□□□ 0.83
LITAF-202ENST00000381810 RUFY3Q7L099 469 aa20.26■□□□□ 0.83
LITAF-202ENST00000381810 MAST3O60307 1309 aa20.26■□□□□ 0.83
LITAF-202ENST00000381810 DOCK2Q92608 1830 aa20.25■□□□□ 0.83
LITAF-202ENST00000381810 CPA1P15085 419 aa20.25■□□□□ 0.83
LITAF-202ENST00000381810 RBM6P78332 1123 aaKnown RBP20.25■□□□□ 0.83
LITAF-202ENST00000381810 CHRNDQ07001 517 aa20.25■□□□□ 0.83
LITAF-202ENST00000381810 KRT32Q14532 448 aa20.25■□□□□ 0.83
LITAF-202ENST00000381810 PI16Q6UXB8 463 aa20.25■□□□□ 0.83
LITAF-202ENST00000381810 TPTE2Q6XPS3 522 aa20.25■□□□□ 0.83
LITAF-202ENST00000381810 DSCC1Q9BVC3 393 aa20.25■□□□□ 0.83
LITAF-202ENST00000381810 LIMCH1Q9UPQ0 1083 aa20.25■□□□□ 0.83
LITAF-202ENST00000381810 M0R2C6 588 aa20.24■□□□□ 0.83
LITAF-202ENST00000381810 TRIM37O94972 964 aa20.24■□□□□ 0.83
LITAF-202ENST00000381810 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.24■□□□□ 0.83
LITAF-202ENST00000381810 LAMA4Q16363 1823 aa20.24■□□□□ 0.83
LITAF-202ENST00000381810 ZSCAN25Q6NSZ9 544 aa20.23■□□□□ 0.83
LITAF-202ENST00000381810 APPBP2Q92624 585 aa20.23■□□□□ 0.83
LITAF-202ENST00000381810 NLRP3Q96P20 1036 aa20.23■□□□□ 0.83
LITAF-202ENST00000381810 GBP4Q96PP9 640 aa20.23■□□□□ 0.83
LITAF-202ENST00000381810 TNRC6CQ9HCJ0 1690 aaKnown RBP20.23■□□□□ 0.83
LITAF-202ENST00000381810 CYP2E1P05181 493 aaPredicted RBP20.22■□□□□ 0.83
LITAF-202ENST00000381810 BLOC1S2Q6QNY1 142 aa20.22■□□□□ 0.83
LITAF-202ENST00000381810 OSBP2Q969R2 916 aa20.22■□□□□ 0.83
LITAF-202ENST00000381810 BSDC1Q9NW68 430 aaPredicted RBP20.22■□□□□ 0.83
LITAF-202ENST00000381810 CARMIL3Q8ND23 1372 aa20.22■□□□□ 0.83
LITAF-202ENST00000381810 WASHC4Q2M389 1173 aa20.22■□□□□ 0.83
LITAF-202ENST00000381810 PIH1D3Q9NQM4 214 aaKnown RBP20.22■□□□□ 0.83
LITAF-202ENST00000381810 TAF6LQ9Y6J9 622 aa20.22■□□□□ 0.83
LITAF-202ENST00000381810 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.21■□□□□ 0.83
LITAF-202ENST00000381810 DDX11L8A8MPP1 907 aa20.21■□□□□ 0.83
LITAF-202ENST00000381810 HSPD1P10809 573 aaKnown RBP20.21■□□□□ 0.83
LITAF-202ENST00000381810 RPS6KB1P23443 525 aa20.21■□□□□ 0.83
LITAF-202ENST00000381810 HMGB2P26583 209 aaKnown RBP20.21■□□□□ 0.83
LITAF-202ENST00000381810 ZSCAN31Q96LW9 406 aaPredicted RBP20.21■□□□□ 0.83
LITAF-202ENST00000381810 ALDH8A1Q9H2A2 487 aaPredicted RBP20.21■□□□□ 0.83
LITAF-202ENST00000381810 SNAP23O00161 211 aa20.2■□□□□ 0.82
LITAF-202ENST00000381810 ADD2P35612 726 aa20.2■□□□□ 0.82
LITAF-202ENST00000381810 NFIXQ14938 502 aa20.2■□□□□ 0.82
LITAF-202ENST00000381810 CLEC17AQ6ZS10 378 aa20.2■□□□□ 0.82
LITAF-202ENST00000381810 SPATA5Q8NB90 893 aa20.2■□□□□ 0.82
LITAF-202ENST00000381810 CYP21A2P08686 494 aa20.19■□□□□ 0.82
LITAF-202ENST00000381810 CELF1Q92879 486 aaKnown RBP20.19■□□□□ 0.82
LITAF-202ENST00000381810 SH2B1Q9NRF2 756 aaPredicted RBP20.19■□□□□ 0.82
LITAF-202ENST00000381810 MINPP1Q9UNW1 487 aa20.19■□□□□ 0.82
LITAF-202ENST00000381810 RPS8P62241 208 aaKnown RBP20.18■□□□□ 0.82
LITAF-202ENST00000381810 UBE4AQ14139 1066 aa20.18■□□□□ 0.82
LITAF-202ENST00000381810 ANKRD1Q15327 319 aa20.18■□□□□ 0.82
LITAF-202ENST00000381810 UBE3CQ15386 1083 aa20.18■□□□□ 0.82
LITAF-202ENST00000381810 RASGRF1Q13972 1273 aa20.17■□□□□ 0.82
LITAF-202ENST00000381810 CCDC24Q8N4L8 307 aa20.17■□□□□ 0.82
LITAF-202ENST00000381810 NEK1Q96PY6 1258 aa20.17■□□□□ 0.82
LITAF-202ENST00000381810 NPHP1O15259 732 aa20.17■□□□□ 0.82
LITAF-202ENST00000381810 IDH1O75874 414 aaKnown RBP20.17■□□□□ 0.82
LITAF-202ENST00000381810 BCAMP50895 628 aa20.17■□□□□ 0.82
LITAF-202ENST00000381810 SLC9C2Q5TAH2 1124 aa20.17■□□□□ 0.82
LITAF-202ENST00000381810 LARP6Q9BRS8 491 aaKnown RBP20.17■□□□□ 0.82
LITAF-202ENST00000381810 PUS7LQ9H0K6 701 aaKnown RBP20.17■□□□□ 0.82
LITAF-202ENST00000381810 CTNNA3Q9UI47 895 aa20.17■□□□□ 0.82
LITAF-202ENST00000381810 PDE6AP16499 860 aa20.16■□□□□ 0.82
LITAF-202ENST00000381810 PKP1Q13835 747 aa20.16■□□□□ 0.82
LITAF-202ENST00000381810 TXNRD1Q16881 649 aa20.16■□□□□ 0.82
LITAF-202ENST00000381810 CNBD1Q8NA66 436 aa20.16■□□□□ 0.82
LITAF-202ENST00000381810 MYH13Q9UKX3 1938 aa20.15■□□□□ 0.82
LITAF-202ENST00000381810 GPAA1O43292 621 aa20.15■□□□□ 0.82
LITAF-202ENST00000381810 LARGE1O95461 756 aa20.15■□□□□ 0.82
LITAF-202ENST00000381810 GYS1P13807 737 aa20.15■□□□□ 0.82
LITAF-202ENST00000381810 PTMSP20962 102 aa20.15■□□□□ 0.82
LITAF-202ENST00000381810 TM4SF1P30408 202 aa20.15■□□□□ 0.82
LITAF-202ENST00000381810 COL9A3Q14050 684 aaPredicted RBP20.15■□□□□ 0.82
LITAF-202ENST00000381810 WWC3Q9ULE0 1092 aa20.15■□□□□ 0.82
LITAF-202ENST00000381810 ZDHHC9Q9Y397 364 aa20.15■□□□□ 0.82
LITAF-202ENST00000381810 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.15■□□□□ 0.82
LITAF-202ENST00000381810 ZNF804BA4D1E1 1349 aa20.15■□□□□ 0.82
LITAF-202ENST00000381810 ZNF532Q9HCE3 1301 aa20.15■□□□□ 0.82
LITAF-202ENST00000381810 BAG4O95429 457 aaKnown RBP20.14■□□□□ 0.81
LITAF-202ENST00000381810 HMGB1P09429 215 aaKnown RBP20.14■□□□□ 0.81
LITAF-202ENST00000381810 STOX1Q6ZVD7 989 aa20.14■□□□□ 0.81
LITAF-202ENST00000381810 PROM2Q8N271 834 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms