RNA–Protein interactions for RNA: ENST00000379521.8

NFX1-202, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best)

Gene NFX1, Length 3,609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-202ENST00000379521 PDRG1Q9NUG6 133 aa8.17□□□□□ -1.1
NFX1-202ENST00000379521 PAG1Q9NWQ8 432 aa8.17□□□□□ -1.1
NFX1-202ENST00000379521 RNF113AO15541 343 aaKnown RBP8.17□□□□□ -1.1
NFX1-202ENST00000379521 ANTXR2P58335 489 aa8.17□□□□□ -1.1
NFX1-202ENST00000379521 HSP90AB3PQ58FF7 597 aa8.17□□□□□ -1.1
NFX1-202ENST00000379521 CLEC4GQ6UXB4 293 aa8.17□□□□□ -1.1
NFX1-202ENST00000379521 NKX2-3Q8TAU0 364 aa8.17□□□□□ -1.1
NFX1-202ENST00000379521 RILPL2Q969X0 211 aa8.17□□□□□ -1.1
NFX1-202ENST00000379521 NOL7Q9UMY1 257 aaKnown RBP8.17□□□□□ -1.1
NFX1-202ENST00000379521 CYP46A1Q9Y6A2 500 aa8.17□□□□□ -1.1
NFX1-202ENST00000379521 PRIM1P49642 420 aaKnown RBP8.17□□□□□ -1.1
NFX1-202ENST00000379521 SF3B3Q15393 1217 aaKnown RBP8.17□□□□□ -1.1
NFX1-202ENST00000379521 C15orf52Q6ZUT6 534 aaKnown RBP8.17□□□□□ -1.1
NFX1-202ENST00000379521 MARCH10Q8NA82 808 aaPredicted RBP8.17□□□□□ -1.1
NFX1-202ENST00000379521 NSUN7Q8NE18 718 aaKnown RBP8.17□□□□□ -1.1
NFX1-202ENST00000379521 LOC285556D6RIA3 1793 aa8.17□□□□□ -1.1
NFX1-202ENST00000379521 GADD45BO75293 160 aaPredicted RBP8.16□□□□□ -1.1
NFX1-202ENST00000379521 CHGBP05060 677 aa8.16□□□□□ -1.1
NFX1-202ENST00000379521 MYL6BP14649 208 aa8.16□□□□□ -1.1
NFX1-202ENST00000379521 CASTP20810 708 aaKnown RBP8.16□□□□□ -1.1
NFX1-202ENST00000379521 ADD2P35612 726 aa8.16□□□□□ -1.1
NFX1-202ENST00000379521 OSBP2Q969R2 916 aa8.16□□□□□ -1.1
NFX1-202ENST00000379521 CCDC8Q9H0W5 538 aaPredicted RBP8.16□□□□□ -1.1
NFX1-202ENST00000379521 MROH5Q6ZUA9 1318 aa8.16□□□□□ -1.1
NFX1-202ENST00000379521 ROBO3Q96MS0 1386 aa8.16□□□□□ -1.1
NFX1-202ENST00000379521 LETM1O95202 739 aaPredicted RBP8.16□□□□□ -1.1
NFX1-202ENST00000379521 NOVP48745 357 aa8.16□□□□□ -1.1
NFX1-202ENST00000379521 PUS3Q9BZE2 481 aaKnown RBP8.16□□□□□ -1.1
NFX1-202ENST00000379521 RCOR1Q9UKL0 485 aa8.16□□□□□ -1.1
NFX1-202ENST00000379521 A0A1B0GUL7 405 aa8.16□□□□□ -1.1
NFX1-202ENST00000379521 SCARF1Q14162 830 aa8.16□□□□□ -1.1
NFX1-202ENST00000379521 PRPF40BQ6NWY9 871 aaKnown RBP8.16□□□□□ -1.1
NFX1-202ENST00000379521 SGMS1Q86VZ5 419 aa8.16□□□□□ -1.1
NFX1-202ENST00000379521 DNAJC10Q8IXB1 793 aa8.16□□□□□ -1.1
NFX1-202ENST00000379521 TRIM6-TRIM34B2RNG4 842 aa8.15□□□□□ -1.1
NFX1-202ENST00000379521 MCAMP43121 646 aa8.15□□□□□ -1.1
NFX1-202ENST00000379521 NT5C2P49902 561 aa8.15□□□□□ -1.1
NFX1-202ENST00000379521 SCRN1Q12765 414 aa8.15□□□□□ -1.1
NFX1-202ENST00000379521 SNW1Q13573 536 aaKnown RBP8.15□□□□□ -1.1
NFX1-202ENST00000379521 VPS72Q15906 364 aa8.15□□□□□ -1.1
NFX1-202ENST00000379521 DHX32Q7L7V1 743 aaKnown RBP8.15□□□□□ -1.1
NFX1-202ENST00000379521 STK36Q9NRP7 1315 aa8.15□□□□□ -1.1
NFX1-202ENST00000379521 ITPK1Q13572 414 aa8.15□□□□□ -1.1
NFX1-202ENST00000379521 NTRK3Q16288 839 aa8.15□□□□□ -1.1
NFX1-202ENST00000379521 TOM1L2Q6ZVM7 507 aa8.15□□□□□ -1.1
NFX1-202ENST00000379521 UPF3BQ9BZI7 483 aaKnown RBP8.15□□□□□ -1.1
NFX1-202ENST00000379521 BCL2L12Q9HB09 334 aa8.15□□□□□ -1.1
NFX1-202ENST00000379521 SPTLC3Q9NUV7 552 aa8.15□□□□□ -1.1
NFX1-202ENST00000379521 AKAP2Q9Y2D5 859 aa8.15□□□□□ -1.1
NFX1-202ENST00000379521 BRCA1P38398 1863 aaKnown RBP8.15□□□□□ -1.1
NFX1-202ENST00000379521 PDE8AO60658 829 aa8.15□□□□□ -1.11
NFX1-202ENST00000379521 PDE8BO95263 885 aa8.15□□□□□ -1.11
NFX1-202ENST00000379521 MAP4K4O95819 1239 aaPredicted RBP8.15□□□□□ -1.11
NFX1-202ENST00000379521 GJB2P29033 226 aa8.15□□□□□ -1.11
NFX1-202ENST00000379521 FAM184AQ8NB25 1140 aa8.15□□□□□ -1.11
NFX1-202ENST00000379521 DIAPH3Q9NSV4 1193 aa8.15□□□□□ -1.11
NFX1-202ENST00000379521 FAM217BQ9NTX9 383 aaPredicted RBP8.15□□□□□ -1.11
NFX1-202ENST00000379521 BTG4Q9NY30 223 aa8.15□□□□□ -1.11
NFX1-202ENST00000379521 TMOD3Q9NYL9 352 aa8.15□□□□□ -1.11
NFX1-202ENST00000379521 E7EWF7 191 aa8.14□□□□□ -1.11
NFX1-202ENST00000379521 TM4SF1P30408 202 aa8.14□□□□□ -1.11
NFX1-202ENST00000379521 MCTP1Q6DN14 999 aa8.14□□□□□ -1.11
NFX1-202ENST00000379521 C14orf37Q86TY3 774 aa8.14□□□□□ -1.11
NFX1-202ENST00000379521 EDC3Q96F86 508 aaKnown RBP8.14□□□□□ -1.11
NFX1-202ENST00000379521 XAGE2Q96GT9 111 aa8.14□□□□□ -1.11
NFX1-202ENST00000379521 CHAMP1Q96JM3 812 aa8.14□□□□□ -1.11
NFX1-202ENST00000379521 A0A0G2JLW4 131 aa8.14□□□□□ -1.11
NFX1-202ENST00000379521 AP5Z1O43299 807 aa8.14□□□□□ -1.11
NFX1-202ENST00000379521 APPBP2Q92624 585 aa8.14□□□□□ -1.11
NFX1-202ENST00000379521 JAKMIP1Q96N16 626 aaKnown RBP8.14□□□□□ -1.11
NFX1-202ENST00000379521 NEK1Q96PY6 1258 aa8.14□□□□□ -1.11
NFX1-202ENST00000379521 KLRG2A4D1S0 409 aaPredicted RBP8.14□□□□□ -1.11
NFX1-202ENST00000379521 PDIA3P30101 505 aaKnown RBP8.14□□□□□ -1.11
NFX1-202ENST00000379521 NASPP49321 788 aaPredicted RBP8.14□□□□□ -1.11
NFX1-202ENST00000379521 TTC6Q86TZ1 520 aa8.14□□□□□ -1.11
NFX1-202ENST00000379521 PGBD1Q96JS3 809 aa8.14□□□□□ -1.11
NFX1-202ENST00000379521 SEC62Q99442 399 aaKnown RBP8.14□□□□□ -1.11
NFX1-202ENST00000379521 BOLA2Q9H3K6 86 aa8.14□□□□□ -1.11
NFX1-202ENST00000379521 USP25Q9UHP3 1055 aa8.14□□□□□ -1.11
NFX1-202ENST00000379521 ATP5J2-PTCD1G3V325 749 aa8.13□□□□□ -1.11
NFX1-202ENST00000379521 PTCD1O75127 700 aaKnown RBP8.13□□□□□ -1.11
NFX1-202ENST00000379521 CPA1P15085 419 aa8.13□□□□□ -1.11
NFX1-202ENST00000379521 CCDC183Q5T5S1 534 aa8.13□□□□□ -1.11
NFX1-202ENST00000379521 RNF20Q5VTR2 975 aa8.13□□□□□ -1.11
NFX1-202ENST00000379521 IGDCC4Q8TDY8 1250 aa8.13□□□□□ -1.11
NFX1-202ENST00000379521 ZNF384Q8TF68 577 aa8.13□□□□□ -1.11
NFX1-202ENST00000379521 ADORA1P30542 326 aa8.13□□□□□ -1.11
NFX1-202ENST00000379521 BPIFA3Q9BQP9 254 aa8.13□□□□□ -1.11
NFX1-202ENST00000379521 ZSCAN16Q9H4T2 348 aaPredicted RBP8.13□□□□□ -1.11
NFX1-202ENST00000379521 MKRN1Q9UHC7 482 aaKnown RBP8.13□□□□□ -1.11
NFX1-202ENST00000379521 STARD3NLO95772 234 aa8.12□□□□□ -1.11
NFX1-202ENST00000379521 PARP10Q53GL7 1025 aa8.12□□□□□ -1.11
NFX1-202ENST00000379521 CDC37L1Q7L3B6 337 aa8.12□□□□□ -1.11
NFX1-202ENST00000379521 NBPF11Q86T75 865 aa8.12□□□□□ -1.11
NFX1-202ENST00000379521 SPRYD3Q8NCJ5 442 aa8.12□□□□□ -1.11
NFX1-202ENST00000379521 BCL11BQ9C0K0 894 aaPredicted RBP8.12□□□□□ -1.11
NFX1-202ENST00000379521 ZBTB1Q9Y2K1 713 aa8.12□□□□□ -1.11
NFX1-202ENST00000379521 APBB1O00213 710 aa8.12□□□□□ -1.11
NFX1-202ENST00000379521 PRPF40AO75400 957 aaKnown RBP8.12□□□□□ -1.11
NFX1-202ENST00000379521 AIMP1Q12904 312 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms