RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 BCL9O00512 1426 aa12.81□□□□□ -0.36
NEDD9-201ENST00000379433 AFDNP55196 1824 aaKnown RBP12.81□□□□□ -0.36
NEDD9-201ENST00000379433 CYP21A2P08686 494 aa12.81□□□□□ -0.36
NEDD9-201ENST00000379433 PHKA1P46020 1223 aa12.81□□□□□ -0.36
NEDD9-201ENST00000379433 TOMM22Q9NS69 142 aa12.81□□□□□ -0.36
NEDD9-201ENST00000379433 USP42Q9H9J4 1324 aaKnown RBP12.81□□□□□ -0.36
NEDD9-201ENST00000379433 KCPQ6ZWJ8 1503 aa12.81□□□□□ -0.36
NEDD9-201ENST00000379433 COL15A1P39059 1388 aa12.81□□□□□ -0.36
NEDD9-201ENST00000379433 PALLDQ8WX93 1383 aa12.81□□□□□ -0.36
NEDD9-201ENST00000379433 XRCC6P12956 609 aaKnown RBP eCLIP12.81□□□□□ -0.36
NEDD9-201ENST00000379433 INTS5Q6P9B9 1019 aaKnown RBP12.81□□□□□ -0.36
NEDD9-201ENST00000379433 GPHNQ9NQX3 736 aaPredicted RBP12.81□□□□□ -0.36
NEDD9-201ENST00000379433 ABCF2Q9UG63 623 aa12.81□□□□□ -0.36
NEDD9-201ENST00000379433 GUCY1B3Q02153 619 aa12.8□□□□□ -0.36
NEDD9-201ENST00000379433 SLC4A8Q2Y0W8 1093 aa12.8□□□□□ -0.36
NEDD9-201ENST00000379433 OSBP2Q969R2 916 aa12.8□□□□□ -0.36
NEDD9-201ENST00000379433 CNPY2Q9Y2B0 182 aa12.8□□□□□ -0.36
NEDD9-201ENST00000379433 ZNF609O15014 1411 aa12.8□□□□□ -0.36
NEDD9-201ENST00000379433 M0R2C6 588 aa12.8□□□□□ -0.36
NEDD9-201ENST00000379433 GNPATO15228 680 aa12.8□□□□□ -0.36
NEDD9-201ENST00000379433 GADD45BO75293 160 aaPredicted RBP12.8□□□□□ -0.36
NEDD9-201ENST00000379433 SYT1P21579 422 aa12.8□□□□□ -0.36
NEDD9-201ENST00000379433 MMP14P50281 582 aa12.8□□□□□ -0.36
NEDD9-201ENST00000379433 SLC9C2Q5TAH2 1124 aa12.8□□□□□ -0.36
NEDD9-201ENST00000379433 Q6ZUG5 572 aa12.8□□□□□ -0.36
NEDD9-201ENST00000379433 NCOA5Q9HCD5 579 aaKnown RBP12.8□□□□□ -0.36
NEDD9-201ENST00000379433 JAK2O60674 1132 aa12.79□□□□□ -0.36
NEDD9-201ENST00000379433 IL6STP40189 918 aaPredicted RBP12.79□□□□□ -0.36
NEDD9-201ENST00000379433 TTC14Q96N46 770 aa12.79□□□□□ -0.36
NEDD9-201ENST00000379433 NEK1Q96PY6 1258 aa12.79□□□□□ -0.36
NEDD9-201ENST00000379433 UTP14AQ9BVJ6 771 aaKnown RBP12.79□□□□□ -0.36
NEDD9-201ENST00000379433 PUS7LQ9H0K6 701 aaKnown RBP12.79□□□□□ -0.36
NEDD9-201ENST00000379433 SH3BP1Q9Y3L3 701 aa12.79□□□□□ -0.36
NEDD9-201ENST00000379433 SPATA31A5Q5VU36 1347 aa12.79□□□□□ -0.36
NEDD9-201ENST00000379433 SPATA31A7Q8IWB4 1347 aa12.79□□□□□ -0.36
NEDD9-201ENST00000379433 SH3TC1Q8TE82 1336 aa12.79□□□□□ -0.36
NEDD9-201ENST00000379433 SYCE3A1L190 88 aa12.79□□□□□ -0.36
NEDD9-201ENST00000379433 PSMA5P28066 241 aa12.79□□□□□ -0.36
NEDD9-201ENST00000379433 MCAMP43121 646 aa12.79□□□□□ -0.36
NEDD9-201ENST00000379433 LARP1BQ659C4 914 aaKnown RBP12.79□□□□□ -0.36
NEDD9-201ENST00000379433 AKAP2Q9Y2D5 859 aa12.79□□□□□ -0.36
NEDD9-201ENST00000379433 MRC1P22897 1456 aa12.78□□□□□ -0.36
NEDD9-201ENST00000379433 PDE8AO60658 829 aa12.78□□□□□ -0.36
NEDD9-201ENST00000379433 BCAMP50895 628 aa12.78□□□□□ -0.36
NEDD9-201ENST00000379433 APOBRQ0VD83 1088 aa12.78□□□□□ -0.36
NEDD9-201ENST00000379433 SLC51AQ86UW1 340 aa12.78□□□□□ -0.36
NEDD9-201ENST00000379433 INCENPQ9NQS7 918 aa12.78□□□□□ -0.36
NEDD9-201ENST00000379433 LMBRD1Q9NUN5 540 aa12.78□□□□□ -0.36
NEDD9-201ENST00000379433 TFIP11Q9UBB9 837 aaKnown RBP12.78□□□□□ -0.36
NEDD9-201ENST00000379433 STX6O43752 255 aa12.78□□□□□ -0.36
NEDD9-201ENST00000379433 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.78□□□□□ -0.36
NEDD9-201ENST00000379433 CRYBG1Q9Y4K1 1723 aa12.78□□□□□ -0.36
NEDD9-201ENST00000379433 HSPD1P10809 573 aaKnown RBP12.78□□□□□ -0.36
NEDD9-201ENST00000379433 RXRAP19793 462 aa12.78□□□□□ -0.36
NEDD9-201ENST00000379433 USPL1Q5W0Q7 1092 aa12.78□□□□□ -0.36
NEDD9-201ENST00000379433 MIGA1Q8NAN2 632 aa12.78□□□□□ -0.36
NEDD9-201ENST00000379433 LINC00116Q8NCU8 138 aa12.78□□□□□ -0.36
NEDD9-201ENST00000379433 GPT2Q8TD30 523 aa12.78□□□□□ -0.36
NEDD9-201ENST00000379433 ZSWIM6Q9HCJ5 1215 aa12.78□□□□□ -0.36
NEDD9-201ENST00000379433 DENND2AQ9ULE3 1009 aa12.78□□□□□ -0.36
NEDD9-201ENST00000379433 MAST3O60307 1309 aa12.77□□□□□ -0.36
NEDD9-201ENST00000379433 RNF113AO15541 343 aaKnown RBP12.77□□□□□ -0.36
NEDD9-201ENST00000379433 EIF5P55010 431 aaKnown RBP12.77□□□□□ -0.36
NEDD9-201ENST00000379433 DNM1Q05193 864 aaKnown RBP12.77□□□□□ -0.36
NEDD9-201ENST00000379433 CCDC144CPQ8IYA2 1237 aa12.77□□□□□ -0.36
NEDD9-201ENST00000379433 ERFEQ4G0M1 354 aa12.77□□□□□ -0.37
NEDD9-201ENST00000379433 RRP12Q5JTH9 1297 aaKnown RBP12.77□□□□□ -0.37
NEDD9-201ENST00000379433 STOX1Q6ZVD7 989 aa12.77□□□□□ -0.37
NEDD9-201ENST00000379433 C3orf67Q6ZVT6 689 aa12.77□□□□□ -0.37
NEDD9-201ENST00000379433 VPS37DQ86XT2 251 aa12.77□□□□□ -0.37
NEDD9-201ENST00000379433 PKD1L3Q7Z443 1732 aa12.77□□□□□ -0.37
NEDD9-201ENST00000379433 PARP4Q9UKK3 1724 aaKnown RBP12.77□□□□□ -0.37
NEDD9-201ENST00000379433 SEMA3FQ13275 785 aa12.77□□□□□ -0.37
NEDD9-201ENST00000379433 CUL4AQ13619 759 aa12.77□□□□□ -0.37
NEDD9-201ENST00000379433 CCDC102BQ68D86 513 aa12.77□□□□□ -0.37
NEDD9-201ENST00000379433 USP48Q86UV5 1035 aa12.77□□□□□ -0.37
NEDD9-201ENST00000379433 ARFGEF2Q9Y6D5 1785 aa12.76□□□□□ -0.37
NEDD9-201ENST00000379433 RPS6KB1P23443 525 aa12.76□□□□□ -0.37
NEDD9-201ENST00000379433 GRPEL1Q9HAV7 217 aa12.76□□□□□ -0.37
NEDD9-201ENST00000379433 RIPOR2Q9Y4F9 1068 aa12.76□□□□□ -0.37
NEDD9-201ENST00000379433 BRD1O95696 1058 aa12.76□□□□□ -0.37
NEDD9-201ENST00000379433 IGHMBP2P38935 993 aaKnown RBP12.76□□□□□ -0.37
NEDD9-201ENST00000379433 SGSM3Q96HU1 749 aa12.76□□□□□ -0.37
NEDD9-201ENST00000379433 CCNL1Q9UK58 526 aaPredicted RBP12.76□□□□□ -0.37
NEDD9-201ENST00000379433 PDE8BO95263 885 aa12.75□□□□□ -0.37
NEDD9-201ENST00000379433 GYG1P46976 350 aa12.75□□□□□ -0.37
NEDD9-201ENST00000379433 AMIGO3Q86WK7 504 aa12.75□□□□□ -0.37
NEDD9-201ENST00000379433 WWC3Q9ULE0 1092 aa12.75□□□□□ -0.37
NEDD9-201ENST00000379433 L1TD1Q5T7N2 865 aaKnown RBP12.75□□□□□ -0.37
NEDD9-201ENST00000379433 CDC37L1Q7L3B6 337 aa12.75□□□□□ -0.37
NEDD9-201ENST00000379433 WDR33Q9C0J8 1336 aaKnown RBP12.75□□□□□ -0.37
NEDD9-201ENST00000379433 ZPR1O75312 459 aa12.75□□□□□ -0.37
NEDD9-201ENST00000379433 CAMTA2O94983 1202 aa12.75□□□□□ -0.37
NEDD9-201ENST00000379433 CYP2E1P05181 493 aaPredicted RBP12.75□□□□□ -0.37
NEDD9-201ENST00000379433 CSF1RP07333 972 aa12.75□□□□□ -0.37
NEDD9-201ENST00000379433 ST3GAL1Q11201 340 aa12.75□□□□□ -0.37
NEDD9-201ENST00000379433 TOB2Q14106 344 aaPredicted RBP12.75□□□□□ -0.37
NEDD9-201ENST00000379433 CCDC82Q8N4S0 544 aa12.75□□□□□ -0.37
NEDD9-201ENST00000379433 FAM184AQ8NB25 1140 aa12.75□□□□□ -0.37
NEDD9-201ENST00000379433 PIH1D3Q9NQM4 214 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms