RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 KCNF1Q9H3M0 494 aa23.01■■□□□ 1.27
SHROOM1-202ENST00000378676 PTPDC1A2A3K4 754 aa23.01■■□□□ 1.27
SHROOM1-202ENST00000378676 RNF113AO15541 343 aaKnown RBP23.01■■□□□ 1.27
SHROOM1-202ENST00000378676 ANO6Q4KMQ2 910 aa23.01■■□□□ 1.27
SHROOM1-202ENST00000378676 LLPHQ9BRT6 129 aaKnown RBP23.01■■□□□ 1.27
SHROOM1-202ENST00000378676 CCT2P78371 535 aaKnown RBP23■■□□□ 1.27
SHROOM1-202ENST00000378676 NOLC1Q14978 699 aaKnown RBP eCLIP23■■□□□ 1.27
SHROOM1-202ENST00000378676 SPC24Q8NBT2 197 aa23■■□□□ 1.27
SHROOM1-202ENST00000378676 NCOA5Q9HCD5 579 aaKnown RBP23■■□□□ 1.27
SHROOM1-202ENST00000378676 TTLL5Q6EMB2 1281 aa23■■□□□ 1.27
SHROOM1-202ENST00000378676 CHST3Q7LGC8 479 aa23■■□□□ 1.27
SHROOM1-202ENST00000378676 ISCA1Q9BUE6 129 aa23■■□□□ 1.27
SHROOM1-202ENST00000378676 CBX8Q9HC52 389 aa23■■□□□ 1.27
SHROOM1-202ENST00000378676 IL2RBP14784 551 aa22.99■■□□□ 1.27
SHROOM1-202ENST00000378676 ADORA1P30542 326 aa22.99■■□□□ 1.27
SHROOM1-202ENST00000378676 ADD1P35611 737 aaKnown RBP22.99■■□□□ 1.27
SHROOM1-202ENST00000378676 FTOQ9C0B1 505 aaKnown RBP eCLIP22.99■■□□□ 1.27
SHROOM1-202ENST00000378676 ZSCAN16Q9H4T2 348 aaPredicted RBP22.99■■□□□ 1.27
SHROOM1-202ENST00000378676 PPFIA3O75145 1194 aa22.99■■□□□ 1.27
SHROOM1-202ENST00000378676 MYO5AQ9Y4I1 1855 aaKnown RBP22.98■■□□□ 1.27
SHROOM1-202ENST00000378676 SALL1Q9NSC2 1324 aa22.98■■□□□ 1.27
SHROOM1-202ENST00000378676 CEBPZQ03701 1054 aaKnown RBP22.98■■□□□ 1.27
SHROOM1-202ENST00000378676 OSBP2Q969R2 916 aa22.98■■□□□ 1.27
SHROOM1-202ENST00000378676 ATG3Q9NT62 314 aa22.98■■□□□ 1.27
SHROOM1-202ENST00000378676 CCDC85AQ96PX6 553 aaPredicted RBP22.98■■□□□ 1.27
SHROOM1-202ENST00000378676 ZNF330Q9Y3S2 320 aaPredicted RBP22.98■■□□□ 1.27
SHROOM1-202ENST00000378676 ITGB4P16144 1822 aa22.98■■□□□ 1.27
SHROOM1-202ENST00000378676 AKAP11Q9UKA4 1901 aa22.97■■□□□ 1.27
SHROOM1-202ENST00000378676 PDCL3Q9H2J4 239 aa22.97■■□□□ 1.27
SHROOM1-202ENST00000378676 PYCARDQ9ULZ3 195 aa22.97■■□□□ 1.27
SHROOM1-202ENST00000378676 FOXP2O15409 715 aa22.97■■□□□ 1.27
SHROOM1-202ENST00000378676 FKBP4Q02790 459 aaKnown RBP eCLIP22.97■■□□□ 1.27
SHROOM1-202ENST00000378676 DNTTIP2Q5QJE6 756 aaKnown RBP22.97■■□□□ 1.27
SHROOM1-202ENST00000378676 NAA16Q6N069 864 aaPredicted RBP22.97■■□□□ 1.27
SHROOM1-202ENST00000378676 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.97■■□□□ 1.27
SHROOM1-202ENST00000378676 SPTLC3Q9NUV7 552 aa22.97■■□□□ 1.27
SHROOM1-202ENST00000378676 CEP126Q9P2H0 1117 aa22.97■■□□□ 1.27
SHROOM1-202ENST00000378676 MYH3P11055 1940 aa22.96■■□□□ 1.27
SHROOM1-202ENST00000378676 TICAM2Q86XR7 235 aa22.96■■□□□ 1.27
SHROOM1-202ENST00000378676 NAP1L2Q9ULW6 460 aaPredicted RBP22.96■■□□□ 1.27
SHROOM1-202ENST00000378676 SCARF1Q14162 830 aa22.96■■□□□ 1.27
SHROOM1-202ENST00000378676 CARD10Q9BWT7 1032 aa22.96■■□□□ 1.27
SHROOM1-202ENST00000378676 STRN4Q9NRL3 753 aa22.96■■□□□ 1.27
SHROOM1-202ENST00000378676 CFAP45Q9UL16 551 aa22.96■■□□□ 1.27
SHROOM1-202ENST00000378676 PDIA3P30101 505 aaKnown RBP22.95■■□□□ 1.26
SHROOM1-202ENST00000378676 HMGN5P82970 282 aaKnown RBP22.95■■□□□ 1.26
SHROOM1-202ENST00000378676 TCIRG1Q13488 830 aa22.95■■□□□ 1.26
SHROOM1-202ENST00000378676 CCDC57Q2TAC2 916 aa22.95■■□□□ 1.26
SHROOM1-202ENST00000378676 XAGE2Q96GT9 111 aa22.95■■□□□ 1.26
SHROOM1-202ENST00000378676 GPHNQ9NQX3 736 aaPredicted RBP22.95■■□□□ 1.26
SHROOM1-202ENST00000378676 ANKRD36CQ5JPF3 1778 aa22.95■■□□□ 1.26
SHROOM1-202ENST00000378676 RIC1Q4ADV7 1423 aa22.95■■□□□ 1.26
SHROOM1-202ENST00000378676 HSP90AB3PQ58FF7 597 aa22.94■■□□□ 1.26
SHROOM1-202ENST00000378676 GUCY1B3Q02153 619 aa22.94■■□□□ 1.26
SHROOM1-202ENST00000378676 TTC39AQ5SRH9 613 aa22.94■■□□□ 1.26
SHROOM1-202ENST00000378676 DNAJC25Q9H1X3 360 aa22.94■■□□□ 1.26
SHROOM1-202ENST00000378676 FAM13BQ9NYF5 915 aa22.94■■□□□ 1.26
SHROOM1-202ENST00000378676 KIAA1524Q8TCG1 905 aa22.93■■□□□ 1.26
SHROOM1-202ENST00000378676 FAM89AQ96GI7 184 aa22.93■■□□□ 1.26
SHROOM1-202ENST00000378676 USP28Q96RU2 1077 aa22.93■■□□□ 1.26
SHROOM1-202ENST00000378676 GOLPH3LQ9H4A5 285 aa22.93■■□□□ 1.26
SHROOM1-202ENST00000378676 SOS2Q07890 1332 aaPredicted RBP22.93■■□□□ 1.26
SHROOM1-202ENST00000378676 CARMIL3Q8ND23 1372 aa22.93■■□□□ 1.26
SHROOM1-202ENST00000378676 DYNC1I1O14576 645 aa22.93■■□□□ 1.26
SHROOM1-202ENST00000378676 ILDR1Q86SU0 546 aaPredicted RBP22.93■■□□□ 1.26
SHROOM1-202ENST00000378676 C4AP0C0L4 1744 aa22.93■■□□□ 1.26
SHROOM1-202ENST00000378676 C4BP0C0L5 1744 aa22.93■■□□□ 1.26
SHROOM1-202ENST00000378676 HAND2P61296 217 aa22.92■■□□□ 1.26
SHROOM1-202ENST00000378676 TDRD7Q8NHU6 1098 aaKnown RBP22.92■■□□□ 1.26
SHROOM1-202ENST00000378676 RCOR1Q9UKL0 485 aa22.92■■□□□ 1.26
SHROOM1-202ENST00000378676 PTGS1P23219 599 aa22.92■■□□□ 1.26
SHROOM1-202ENST00000378676 CCDC158Q5M9N0 1113 aa22.92■■□□□ 1.26
SHROOM1-202ENST00000378676 PI16Q6UXB8 463 aa22.92■■□□□ 1.26
SHROOM1-202ENST00000378676 DNAJC10Q8IXB1 793 aa22.92■■□□□ 1.26
SHROOM1-202ENST00000378676 ZNF274Q96GC6 653 aaPredicted RBP22.92■■□□□ 1.26
SHROOM1-202ENST00000378676 GORABQ5T7V8 394 aa22.91■■□□□ 1.26
SHROOM1-202ENST00000378676 FDPSP14324 419 aaKnown RBP22.91■■□□□ 1.26
SHROOM1-202ENST00000378676 ZAP70P43403 619 aa22.91■■□□□ 1.26
SHROOM1-202ENST00000378676 WASHC4Q2M389 1173 aa22.91■■□□□ 1.26
SHROOM1-202ENST00000378676 CCAR1Q8IX12 1150 aaKnown RBP22.91■■□□□ 1.26
SHROOM1-202ENST00000378676 SYNE4Q8N205 404 aa22.91■■□□□ 1.26
SHROOM1-202ENST00000378676 MYRIPQ8NFW9 859 aa22.91■■□□□ 1.26
SHROOM1-202ENST00000378676 TMOD3Q9NYL9 352 aa22.91■■□□□ 1.26
SHROOM1-202ENST00000378676 GOLGA6L6A8MZA4 724 aa22.9■■□□□ 1.26
SHROOM1-202ENST00000378676 PCCAP05165 728 aaPredicted RBP22.9■■□□□ 1.26
SHROOM1-202ENST00000378676 TPM3P06753 285 aa22.9■■□□□ 1.26
SHROOM1-202ENST00000378676 ZNF165P49910 485 aa22.9■■□□□ 1.26
SHROOM1-202ENST00000378676 ASAP1Q9ULH1 1129 aa22.9■■□□□ 1.26
SHROOM1-202ENST00000378676 PLA2G4DQ86XP0 818 aa22.9■■□□□ 1.26
SHROOM1-202ENST00000378676 AKAP2Q9Y2D5 859 aa22.9■■□□□ 1.26
SHROOM1-202ENST00000378676 ECM29Q5VYK3 1845 aa22.89■■□□□ 1.26
SHROOM1-202ENST00000378676 ZNF75DP51815 510 aa22.89■■□□□ 1.26
SHROOM1-202ENST00000378676 KIF3AQ9Y496 699 aa22.89■■□□□ 1.26
SHROOM1-202ENST00000378676 NUP98P52948 1817 aa22.89■■□□□ 1.25
SHROOM1-202ENST00000378676 TRIM28Q13263 835 aaKnown RBP22.89■■□□□ 1.25
SHROOM1-202ENST00000378676 PLA2G12BQ9BX93 195 aa22.89■■□□□ 1.25
SHROOM1-202ENST00000378676 PUS7LQ9H0K6 701 aaKnown RBP22.89■■□□□ 1.25
SHROOM1-202ENST00000378676 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.88■■□□□ 1.25
SHROOM1-202ENST00000378676 CSF1RP07333 972 aa22.88■■□□□ 1.25
SHROOM1-202ENST00000378676 TAF7LQ5H9L4 462 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms