RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 USP31Q70CQ4 1352 aa9.93□□□□□ -0.82
CRNKL1-202ENST00000377340 CYP19A1P11511 503 aaPredicted RBP9.93□□□□□ -0.82
CRNKL1-202ENST00000377340 ME1P48163 572 aa9.93□□□□□ -0.82
CRNKL1-202ENST00000377340 NCOA7Q8NI08 942 aa9.93□□□□□ -0.82
CRNKL1-202ENST00000377340 ZKSCAN3Q9BRR0 538 aa9.93□□□□□ -0.82
CRNKL1-202ENST00000377340 PLCG2P16885 1265 aa9.92□□□□□ -0.82
CRNKL1-202ENST00000377340 VSIG10Q8N0Z9 540 aa9.92□□□□□ -0.82
CRNKL1-202ENST00000377340 NARFQ9UHQ1 456 aa9.92□□□□□ -0.82
CRNKL1-202ENST00000377340 GOLGA6L19H0YKK7 550 aa9.92□□□□□ -0.82
CRNKL1-202ENST00000377340 TNNI2P48788 182 aa9.92□□□□□ -0.82
CRNKL1-202ENST00000377340 TBC1D9BQ66K14 1250 aa9.92□□□□□ -0.82
CRNKL1-202ENST00000377340 TTLL6Q8N841 843 aa9.92□□□□□ -0.82
CRNKL1-202ENST00000377340 PCMTD1Q96MG8 357 aaPredicted RBP9.92□□□□□ -0.82
CRNKL1-202ENST00000377340 TECPR2O15040 1411 aa9.92□□□□□ -0.82
CRNKL1-202ENST00000377340 CDK12Q9NYV4 1490 aaPredicted RBP9.92□□□□□ -0.82
CRNKL1-202ENST00000377340 PREX1Q8TCU6 1659 aa9.92□□□□□ -0.82
CRNKL1-202ENST00000377340 CCDC196A0A1B0GTZ2 297 aa9.92□□□□□ -0.82
CRNKL1-202ENST00000377340 DALRD3Q5D0E6 543 aaKnown RBP9.92□□□□□ -0.82
CRNKL1-202ENST00000377340 MAPKAPK5Q8IW41 473 aa9.92□□□□□ -0.82
CRNKL1-202ENST00000377340 ESR2Q92731 530 aa9.92□□□□□ -0.82
CRNKL1-202ENST00000377340 SPON1Q9HCB6 807 aa9.92□□□□□ -0.82
CRNKL1-202ENST00000377340 R3HCC1Q9Y3T6 440 aaKnown RBP9.92□□□□□ -0.82
CRNKL1-202ENST00000377340 K7ELQ4 463 aaPredicted RBP9.91□□□□□ -0.82
CRNKL1-202ENST00000377340 PPEF1O14829 653 aaPredicted RBP9.91□□□□□ -0.82
CRNKL1-202ENST00000377340 PLEKHM2Q8IWE5 1019 aa9.91□□□□□ -0.82
CRNKL1-202ENST00000377340 OVOS2A0A0G2JMS6 1433 aa9.91□□□□□ -0.82
CRNKL1-202ENST00000377340 OVOS2A0A0J9YW53 1432 aa9.91□□□□□ -0.82
CRNKL1-202ENST00000377340 OVOS2Q6IE36 1432 aa9.91□□□□□ -0.82
CRNKL1-202ENST00000377340 PTMSP20962 102 aa9.91□□□□□ -0.82
CRNKL1-202ENST00000377340 DHX8Q14562 1220 aaKnown RBP9.91□□□□□ -0.82
CRNKL1-202ENST00000377340 SPATA5Q8NB90 893 aa9.91□□□□□ -0.82
CRNKL1-202ENST00000377340 EAF2Q96CJ1 260 aaPredicted RBP9.91□□□□□ -0.82
CRNKL1-202ENST00000377340 SPATA31D1Q6ZQQ2 1576 aa9.91□□□□□ -0.82
CRNKL1-202ENST00000377340 MROH5Q6ZUA9 1318 aa9.91□□□□□ -0.82
CRNKL1-202ENST00000377340 WTAPQ15007 396 aa9.91□□□□□ -0.82
CRNKL1-202ENST00000377340 DDX11L8A8MPP1 907 aa9.91□□□□□ -0.82
CRNKL1-202ENST00000377340 SSH2Q76I76 1423 aa9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 ZNF804BA4D1E1 1349 aa9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 CHRNA5P30532 468 aa9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 NFIXQ14938 502 aa9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 TTC6Q86TZ1 520 aa9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 SMC5Q8IY18 1101 aa9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 MST1RQ04912 1400 aa9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 A0A0G2JLW4 131 aa9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 KLF18A0A0U1RQI7 1052 aa9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 NBPF26B4DH59 902 aa9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 PRPF40AO75400 957 aaKnown RBP9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 ZNF853P0CG23 659 aa9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 RXRAP19793 462 aa9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 MCM5P33992 734 aa9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 TXLNAP40222 546 aa9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 NLRP5P59047 1200 aa9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 SLC27A3Q5K4L6 730 aa9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 IFIT1BQ5T764 474 aaKnown RBP9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 NBPF10Q6P3W6 841 aaKnown RBP9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 NBPF15Q8N660 670 aa9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 PIM2Q9P1W9 311 aa9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 KDRP35968 1356 aa9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 TRPM1Q7Z4N2 1603 aa9.9□□□□□ -0.82
CRNKL1-202ENST00000377340 ERVV-1B6SEH8 477 aa9.9□□□□□ -0.83
CRNKL1-202ENST00000377340 HMGB1P09429 215 aaKnown RBP9.9□□□□□ -0.83
CRNKL1-202ENST00000377340 PHKA1P46020 1223 aa9.9□□□□□ -0.83
CRNKL1-202ENST00000377340 CCDC102BQ68D86 513 aa9.9□□□□□ -0.83
CRNKL1-202ENST00000377340 NECAB1Q8N987 351 aa9.9□□□□□ -0.83
CRNKL1-202ENST00000377340 TGFBRAP1Q8WUH2 860 aa9.9□□□□□ -0.83
CRNKL1-202ENST00000377340 CNKSR2Q8WXI2 1034 aa9.9□□□□□ -0.83
CRNKL1-202ENST00000377340 ZSCAN31Q96LW9 406 aaPredicted RBP9.9□□□□□ -0.83
CRNKL1-202ENST00000377340 HOOK1Q9UJC3 728 aaKnown RBP9.9□□□□□ -0.83
CRNKL1-202ENST00000377340 CPS1P31327 1500 aa9.9□□□□□ -0.83
CRNKL1-202ENST00000377340 TTC41PQ6P2S7 1318 aa9.9□□□□□ -0.83
CRNKL1-202ENST00000377340 CLRN2A0PK11 232 aa9.89□□□□□ -0.83
CRNKL1-202ENST00000377340 TCP10L2B9ZVM9 353 aa9.89□□□□□ -0.83
CRNKL1-202ENST00000377340 BBOX1O75936 387 aa9.89□□□□□ -0.83
CRNKL1-202ENST00000377340 PDE8BO95263 885 aa9.89□□□□□ -0.83
CRNKL1-202ENST00000377340 ATP2B4P23634 1241 aa9.89□□□□□ -0.83
CRNKL1-202ENST00000377340 DIP2AQ14689 1571 aa9.89□□□□□ -0.83
CRNKL1-202ENST00000377340 PNPLA6Q8IY17 1366 aa9.89□□□□□ -0.83
CRNKL1-202ENST00000377340 ADORA1P30542 326 aa9.89□□□□□ -0.83
CRNKL1-202ENST00000377340 C8orf76Q96K31 380 aa9.89□□□□□ -0.83
CRNKL1-202ENST00000377340 FAM227BQ96M60 508 aa9.89□□□□□ -0.83
CRNKL1-202ENST00000377340 ESYT1Q9BSJ8 1104 aa9.89□□□□□ -0.83
CRNKL1-202ENST00000377340 SLC26A6Q9BXS9 759 aa9.89□□□□□ -0.83
CRNKL1-202ENST00000377340 USP40Q9NVE5 1235 aa9.89□□□□□ -0.83
CRNKL1-202ENST00000377340 NOL7Q9UMY1 257 aaKnown RBP9.89□□□□□ -0.83
CRNKL1-202ENST00000377340 IARSP41252 1262 aaKnown RBP9.89□□□□□ -0.83
CRNKL1-202ENST00000377340 BARGINQ6ZT62 677 aa9.89□□□□□ -0.83
CRNKL1-202ENST00000377340 KIF5BP33176 963 aa9.89□□□□□ -0.83
CRNKL1-202ENST00000377340 METAP2P50579 478 aaKnown RBP eCLIP9.89□□□□□ -0.83
CRNKL1-202ENST00000377340 ITPK1Q13572 414 aa9.89□□□□□ -0.83
CRNKL1-202ENST00000377340 CLEC4GQ6UXB4 293 aa9.89□□□□□ -0.83
CRNKL1-202ENST00000377340 KIAA2012Q0VF49 1180 aa9.88□□□□□ -0.83
CRNKL1-202ENST00000377340 CUL5Q93034 780 aa9.88□□□□□ -0.83
CRNKL1-202ENST00000377340 TEKT1Q969V4 418 aa9.88□□□□□ -0.83
CRNKL1-202ENST00000377340 COL15A1P39059 1388 aa9.88□□□□□ -0.83
CRNKL1-202ENST00000377340 GPAA1O43292 621 aa9.88□□□□□ -0.83
CRNKL1-202ENST00000377340 KINO60870 393 aaKnown RBP9.88□□□□□ -0.83
CRNKL1-202ENST00000377340 ZNF396Q96N95 335 aaPredicted RBP9.88□□□□□ -0.83
CRNKL1-202ENST00000377340 ORC3Q9UBD5 711 aaPredicted RBP9.88□□□□□ -0.83
CRNKL1-202ENST00000377340 ZNF532Q9HCE3 1301 aa9.88□□□□□ -0.83
CRNKL1-202ENST00000377340 CCDC194A0A1B0GVG4 234 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms