RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 EPB41L2O43491 1005 aaKnown RBP19■□□□□ 0.63
NIPAL3-204ENST00000374399 HOXA10P31260 410 aaPredicted RBP19■□□□□ 0.63
NIPAL3-204ENST00000374399 SLC4A3P48751 1232 aa19■□□□□ 0.63
NIPAL3-204ENST00000374399 PDGFDQ9GZP0 370 aaPredicted RBP19■□□□□ 0.63
NIPAL3-204ENST00000374399 COL11A2P13942 1736 aaPredicted RBP19■□□□□ 0.63
NIPAL3-204ENST00000374399 RAD50Q92878 1312 aa18.99■□□□□ 0.63
NIPAL3-204ENST00000374399 IRS2Q9Y4H2 1338 aa18.99■□□□□ 0.63
NIPAL3-204ENST00000374399 BCAMP50895 628 aa18.99■□□□□ 0.63
NIPAL3-204ENST00000374399 FKBP4Q02790 459 aaKnown RBP eCLIP18.99■□□□□ 0.63
NIPAL3-204ENST00000374399 PTH1RQ03431 593 aa18.99■□□□□ 0.63
NIPAL3-204ENST00000374399 UBE4AQ14139 1066 aa18.99■□□□□ 0.63
NIPAL3-204ENST00000374399 ZNF589Q86UQ0 364 aaPredicted RBP18.99■□□□□ 0.63
NIPAL3-204ENST00000374399 RUFY2Q8WXA3 655 aa18.99■□□□□ 0.63
NIPAL3-204ENST00000374399 PALD1Q9ULE6 856 aa18.99■□□□□ 0.63
NIPAL3-204ENST00000374399 ZNF804BA4D1E1 1349 aa18.98■□□□□ 0.63
NIPAL3-204ENST00000374399 SF3B2Q13435 895 aaKnown RBP18.98■□□□□ 0.63
NIPAL3-204ENST00000374399 TICAM2Q86XR7 235 aa18.98■□□□□ 0.63
NIPAL3-204ENST00000374399 IL17RAQ96F46 866 aa18.98■□□□□ 0.63
NIPAL3-204ENST00000374399 DOCK2Q92608 1830 aa18.98■□□□□ 0.63
NIPAL3-204ENST00000374399 CYP2E1P05181 493 aaPredicted RBP18.97■□□□□ 0.63
NIPAL3-204ENST00000374399 KLRK1P26718 216 aa18.97■□□□□ 0.63
NIPAL3-204ENST00000374399 RASGRF1Q13972 1273 aa18.97■□□□□ 0.63
NIPAL3-204ENST00000374399 SEC62Q99442 399 aaKnown RBP18.97■□□□□ 0.63
NIPAL3-204ENST00000374399 BRIP1Q9BX63 1249 aa18.97■□□□□ 0.63
NIPAL3-204ENST00000374399 TBC1D2Q9BYX2 928 aa18.97■□□□□ 0.63
NIPAL3-204ENST00000374399 HMG20BQ9P0W2 317 aa18.97■□□□□ 0.63
NIPAL3-204ENST00000374399 UQCRFS1P1P0C7P4 283 aa18.97■□□□□ 0.63
NIPAL3-204ENST00000374399 HSPA4P34932 840 aa18.97■□□□□ 0.63
NIPAL3-204ENST00000374399 RPGRQ92834 1020 aaKnown RBP18.97■□□□□ 0.63
NIPAL3-204ENST00000374399 LRRC37AA6NMS7 1700 aa18.96■□□□□ 0.63
NIPAL3-204ENST00000374399 PIH1D3Q9NQM4 214 aaKnown RBP18.96■□□□□ 0.63
NIPAL3-204ENST00000374399 LTBP1Q14766 1721 aa18.95■□□□□ 0.62
NIPAL3-204ENST00000374399 CD2BP2O95400 341 aaKnown RBP18.95■□□□□ 0.62
NIPAL3-204ENST00000374399 GYG1P46976 350 aa18.95■□□□□ 0.62
NIPAL3-204ENST00000374399 ZMYM1Q5SVZ6 1142 aa18.95■□□□□ 0.62
NIPAL3-204ENST00000374399 CRAMP1Q96RY5 1269 aa18.95■□□□□ 0.62
NIPAL3-204ENST00000374399 ANKRD2Q9GZV1 360 aa18.95■□□□□ 0.62
NIPAL3-204ENST00000374399 PARP3Q9Y6F1 533 aa18.95■□□□□ 0.62
NIPAL3-204ENST00000374399 COL1A1P02452 1464 aaPredicted RBP18.95■□□□□ 0.62
NIPAL3-204ENST00000374399 CCDC171Q6TFL3 1326 aa18.95■□□□□ 0.62
NIPAL3-204ENST00000374399 SPATA5Q8NB90 893 aa18.94■□□□□ 0.62
NIPAL3-204ENST00000374399 RBM17Q96I25 401 aaKnown RBP18.94■□□□□ 0.62
NIPAL3-204ENST00000374399 FAM84BQ96KN1 310 aaPredicted RBP18.94■□□□□ 0.62
NIPAL3-204ENST00000374399 RNF113AO15541 343 aaKnown RBP18.94■□□□□ 0.62
NIPAL3-204ENST00000374399 SRGNP10124 158 aa18.94■□□□□ 0.62
NIPAL3-204ENST00000374399 CCDC129Q6ZRS4 1044 aa18.94■□□□□ 0.62
NIPAL3-204ENST00000374399 FBXO33Q7Z6M2 555 aa18.94■□□□□ 0.62
NIPAL3-204ENST00000374399 MAP4K1Q92918 833 aa18.94■□□□□ 0.62
NIPAL3-204ENST00000374399 TXNRD3Q86VQ6 643 aa18.93■□□□□ 0.62
NIPAL3-204ENST00000374399 SNX21Q969T3 373 aa18.93■□□□□ 0.62
NIPAL3-204ENST00000374399 ANAPC15P60006 121 aa18.92■□□□□ 0.62
NIPAL3-204ENST00000374399 NECTIN1Q15223 517 aa18.92■□□□□ 0.62
NIPAL3-204ENST00000374399 MCMDC2Q4G0Z9 681 aa18.92■□□□□ 0.62
NIPAL3-204ENST00000374399 KIAA1211Q6ZU35 1233 aa18.92■□□□□ 0.62
NIPAL3-204ENST00000374399 CCDC125Q86Z20 511 aa18.92■□□□□ 0.62
NIPAL3-204ENST00000374399 RASEFQ8IZ41 740 aa18.92■□□□□ 0.62
NIPAL3-204ENST00000374399 KCNB2Q92953 911 aa18.92■□□□□ 0.62
NIPAL3-204ENST00000374399 HELLSQ9NRZ9 838 aa18.92■□□□□ 0.62
NIPAL3-204ENST00000374399 RABEP1Q15276 862 aa18.91■□□□□ 0.62
NIPAL3-204ENST00000374399 OSBP2Q969R2 916 aa18.91■□□□□ 0.62
NIPAL3-204ENST00000374399 MAST3O60307 1309 aa18.91■□□□□ 0.62
NIPAL3-204ENST00000374399 M0R2C6 588 aa18.91■□□□□ 0.62
NIPAL3-204ENST00000374399 BBOX1O75936 387 aa18.91■□□□□ 0.62
NIPAL3-204ENST00000374399 GPSM2P81274 684 aa18.91■□□□□ 0.62
NIPAL3-204ENST00000374399 MYH13Q9UKX3 1938 aa18.9■□□□□ 0.62
NIPAL3-204ENST00000374399 ADD2P35612 726 aa18.9■□□□□ 0.62
NIPAL3-204ENST00000374399 TTF1Q15361 905 aaPredicted RBP18.9■□□□□ 0.62
NIPAL3-204ENST00000374399 IQSEC3Q9UPP2 1182 aaPredicted RBP18.9■□□□□ 0.62
NIPAL3-204ENST00000374399 SNX14Q9Y5W7 946 aa18.9■□□□□ 0.62
NIPAL3-204ENST00000374399 XDHP47989 1333 aa18.9■□□□□ 0.62
NIPAL3-204ENST00000374399 TCRBV5S4A2TA0A5A2 114 aa18.89■□□□□ 0.61
NIPAL3-204ENST00000374399 MCCP23508 829 aa18.89■□□□□ 0.61
NIPAL3-204ENST00000374399 WWC3Q9ULE0 1092 aa18.89■□□□□ 0.61
NIPAL3-204ENST00000374399 LEMD3Q9Y2U8 911 aa18.89■□□□□ 0.61
NIPAL3-204ENST00000374399 RBM8AQ9Y5S9 174 aaKnown RBP18.89■□□□□ 0.61
NIPAL3-204ENST00000374399 ZBTB22O15209 634 aa18.88■□□□□ 0.61
NIPAL3-204ENST00000374399 FOXP2O15409 715 aa18.88■□□□□ 0.61
NIPAL3-204ENST00000374399 ZFYP08048 801 aaPredicted RBP18.88■□□□□ 0.61
NIPAL3-204ENST00000374399 NPR1P16066 1061 aa18.88■□□□□ 0.61
NIPAL3-204ENST00000374399 PDE6BP35913 854 aa18.88■□□□□ 0.61
NIPAL3-204ENST00000374399 KCNJ4P48050 445 aa18.88■□□□□ 0.61
NIPAL3-204ENST00000374399 BECN1Q14457 450 aa18.88■□□□□ 0.61
NIPAL3-204ENST00000374399 VPS53Q5VIR6 699 aa18.88■□□□□ 0.61
NIPAL3-204ENST00000374399 CACNA1SQ13698 1873 aa18.88■□□□□ 0.61
NIPAL3-204ENST00000374399 CAVIN4Q5BKX8 364 aa18.88■□□□□ 0.61
NIPAL3-204ENST00000374399 C15orf52Q6ZUT6 534 aaKnown RBP18.88■□□□□ 0.61
NIPAL3-204ENST00000374399 GPR101Q96P66 508 aaPredicted RBP18.88■□□□□ 0.61
NIPAL3-204ENST00000374399 PUS7LQ9H0K6 701 aaKnown RBP18.88■□□□□ 0.61
NIPAL3-204ENST00000374399 PODXL2Q9NZ53 605 aa18.88■□□□□ 0.61
NIPAL3-204ENST00000374399 ANKIB1Q9P2G1 1089 aa18.88■□□□□ 0.61
NIPAL3-204ENST00000374399 PDE6AP16499 860 aa18.87■□□□□ 0.61
NIPAL3-204ENST00000374399 PRPF40BQ6NWY9 871 aaKnown RBP18.87■□□□□ 0.61
NIPAL3-204ENST00000374399 APPBP2Q92624 585 aa18.87■□□□□ 0.61
NIPAL3-204ENST00000374399 TAF6LQ9Y6J9 622 aa18.87■□□□□ 0.61
NIPAL3-204ENST00000374399 DUOX1Q9NRD9 1551 aa18.87■□□□□ 0.61
NIPAL3-204ENST00000374399 PPEF1O14829 653 aaPredicted RBP18.86■□□□□ 0.61
NIPAL3-204ENST00000374399 IDH1O75874 414 aaKnown RBP18.86■□□□□ 0.61
NIPAL3-204ENST00000374399 HIBADHP31937 336 aaKnown RBP18.86■□□□□ 0.61
NIPAL3-204ENST00000374399 UBE3CQ15386 1083 aa18.86■□□□□ 0.61
NIPAL3-204ENST00000374399 SLC9C2Q5TAH2 1124 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms