RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 PPP4R3AQ6IN85 833 aa12.04□□□□□ -0.48
NUP188-201ENST00000372577 TMC6Q7Z403 805 aa12.04□□□□□ -0.48
NUP188-201ENST00000372577 CCDC144CPQ8IYA2 1237 aa12.04□□□□□ -0.48
NUP188-201ENST00000372577 CABLES1Q8TDN4 633 aa12.04□□□□□ -0.48
NUP188-201ENST00000372577 BCL11BQ9C0K0 894 aaPredicted RBP12.04□□□□□ -0.48
NUP188-201ENST00000372577 PAXBP1Q9Y5B6 917 aa12.04□□□□□ -0.48
NUP188-201ENST00000372577 TNNI3KQ59H18 835 aa12.03□□□□□ -0.48
NUP188-201ENST00000372577 FPGT-TNNI3KV9GXZ4 949 aa12.03□□□□□ -0.48
NUP188-201ENST00000372577 HCLS1P14317 486 aaPredicted RBP12.03□□□□□ -0.48
NUP188-201ENST00000372577 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.03□□□□□ -0.487e-8■■■■■ 53.1
NUP188-201ENST00000372577 EIF4A1P60842 406 aaKnown RBP12.03□□□□□ -0.48
NUP188-201ENST00000372577 TRIM21P19474 475 aaKnown RBP12.03□□□□□ -0.48
NUP188-201ENST00000372577 CETN1Q12798 172 aa12.03□□□□□ -0.48
NUP188-201ENST00000372577 MTIF2P46199 727 aaKnown RBP12.02□□□□□ -0.48
NUP188-201ENST00000372577 KIF4BQ2VIQ3 1234 aa12.02□□□□□ -0.48
NUP188-201ENST00000372577 GIMAP6Q6P9H5 292 aa12.02□□□□□ -0.48
NUP188-201ENST00000372577 EHBP1Q8NDI1 1231 aa12.02□□□□□ -0.48
NUP188-201ENST00000372577 ERMNQ8TAM6 284 aa12.02□□□□□ -0.48
NUP188-201ENST00000372577 CNKSR2Q8WXI2 1034 aa12.02□□□□□ -0.48
NUP188-201ENST00000372577 SEPT11Q9NVA2 429 aaKnown RBP12.02□□□□□ -0.48
NUP188-201ENST00000372577 RBM28Q9NW13 759 aaKnown RBP12.02□□□□□ -0.48
NUP188-201ENST00000372577 SPTLC2O15270 562 aa12.02□□□□□ -0.48
NUP188-201ENST00000372577 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.02□□□□□ -0.484e-6■■□□□ 11.7
NUP188-201ENST00000372577 DNM1Q05193 864 aaKnown RBP12.02□□□□□ -0.49
NUP188-201ENST00000372577 ERBB4Q15303 1308 aa12.02□□□□□ -0.49
NUP188-201ENST00000372577 SGSM2O43147 1006 aa12.02□□□□□ -0.49
NUP188-201ENST00000372577 RPS6KB1P23443 525 aa12.02□□□□□ -0.49
NUP188-201ENST00000372577 CERS3Q8IU89 383 aa12.02□□□□□ -0.49
NUP188-201ENST00000372577 DENND2AQ9ULE3 1009 aa12.02□□□□□ -0.49
NUP188-201ENST00000372577 RTCBQ9Y3I0 505 aaKnown RBP12.02□□□□□ -0.49
NUP188-201ENST00000372577 H0YHG0 523 aa12.02□□□□□ -0.49
NUP188-201ENST00000372577 DACT1Q9NYF0 836 aa12.02□□□□□ -0.49
NUP188-201ENST00000372577 NLRP1Q9C000 1473 aa12.01□□□□□ -0.49
NUP188-201ENST00000372577 ERVV-2B6SEH9 535 aa12.01□□□□□ -0.49
NUP188-201ENST00000372577 URI1O94763 535 aaPredicted RBP12.01□□□□□ -0.49
NUP188-201ENST00000372577 TMEM87BQ96K49 555 aa12.01□□□□□ -0.49
NUP188-201ENST00000372577 TRIM75PA6NK02 468 aa12.01□□□□□ -0.49
NUP188-201ENST00000372577 BIN1O00499 593 aa12.01□□□□□ -0.49
NUP188-201ENST00000372577 SEC24BO95487 1268 aa12.01□□□□□ -0.49
NUP188-201ENST00000372577 PTPDC1A2A3K4 754 aa12.01□□□□□ -0.49
NUP188-201ENST00000372577 ANO6Q4KMQ2 910 aa12.01□□□□□ -0.49
NUP188-201ENST00000372577 ALS2CR12Q96Q35 445 aa12.01□□□□□ -0.49
NUP188-201ENST00000372577 PLEKHF1Q96S99 279 aa12.01□□□□□ -0.49
NUP188-201ENST00000372577 LRRC2Q9BYS8 371 aa12.01□□□□□ -0.49
NUP188-201ENST00000372577 CDC42BPAQ5VT25 1732 aa12.01□□□□□ -0.49
NUP188-201ENST00000372577 ARHGAP31Q2M1Z3 1444 aa12.01□□□□□ -0.49
NUP188-201ENST00000372577 PDE8AO60658 829 aa12.01□□□□□ -0.49
NUP188-201ENST00000372577 PAFAH1B1P43034 410 aa12.01□□□□□ -0.49
NUP188-201ENST00000372577 PUM3Q15397 648 aaKnown RBP12□□□□□ -0.49
NUP188-201ENST00000372577 EXOC1Q9NV70 894 aa12□□□□□ -0.49
NUP188-201ENST00000372577 STX8Q9UNK0 236 aa12□□□□□ -0.49
NUP188-201ENST00000372577 UNC13BO14795 1591 aa12□□□□□ -0.49
NUP188-201ENST00000372577 SNW1Q13573 536 aaKnown RBP12□□□□□ -0.49
NUP188-201ENST00000372577 TCEANC2Q96MN5 208 aa12□□□□□ -0.49
NUP188-201ENST00000372577 CRACR2AQ9BSW2 395 aa12□□□□□ -0.49
NUP188-201ENST00000372577 SH3TC1Q8TE82 1336 aa12□□□□□ -0.49
NUP188-201ENST00000372577 GCKRQ14397 625 aa12□□□□□ -0.49
NUP188-201ENST00000372577 KRI1Q8N9T8 703 aaKnown RBP12□□□□□ -0.49
NUP188-201ENST00000372577 ACSBG1Q96GR2 724 aa12□□□□□ -0.49
NUP188-201ENST00000372577 KDRP35968 1356 aa12□□□□□ -0.49
NUP188-201ENST00000372577 A0A1B0GUL7 405 aa12□□□□□ -0.49
NUP188-201ENST00000372577 MYO1BO43795 1136 aa12□□□□□ -0.49
NUP188-201ENST00000372577 XRCC6P12956 609 aaKnown RBP eCLIP12□□□□□ -0.49
NUP188-201ENST00000372577 MATR3P43243 847 aaKnown RBP eCLIP12□□□□□ -0.49
NUP188-201ENST00000372577 TM6SF1Q9BZW5 370 aa12□□□□□ -0.49
NUP188-201ENST00000372577 C6orf50Q9HD87 102 aa12□□□□□ -0.49
NUP188-201ENST00000372577 APPBP2Q92624 585 aa12□□□□□ -0.49
NUP188-201ENST00000372577 ORAI2Q96SN7 254 aa12□□□□□ -0.49
NUP188-201ENST00000372577 CLCN1P35523 988 aa11.99□□□□□ -0.49
NUP188-201ENST00000372577 UBASH3AP57075 661 aa11.99□□□□□ -0.49
NUP188-201ENST00000372577 CCDC40Q4G0X9 1142 aa11.99□□□□□ -0.49
NUP188-201ENST00000372577 MAGEB6Q8N7X4 407 aa11.99□□□□□ -0.49
NUP188-201ENST00000372577 LGR6Q9HBX8 967 aa11.99□□□□□ -0.49
NUP188-201ENST00000372577 HDAC9Q9UKV0 1011 aa11.99□□□□□ -0.49
NUP188-201ENST00000372577 SLC27A2O14975 620 aa11.99□□□□□ -0.49
NUP188-201ENST00000372577 KRT2P35908 639 aa11.99□□□□□ -0.49
NUP188-201ENST00000372577 DYNC1I1O14576 645 aa11.99□□□□□ -0.49
NUP188-201ENST00000372577 SYT1P21579 422 aa11.99□□□□□ -0.49
NUP188-201ENST00000372577 STAT6P42226 847 aa11.99□□□□□ -0.49
NUP188-201ENST00000372577 KBTBD3Q8NAB2 608 aa11.99□□□□□ -0.49
NUP188-201ENST00000372577 CFAP65Q6ZU64 1925 aaKnown RBP11.99□□□□□ -0.49
NUP188-201ENST00000372577 PLA2R1Q13018 1463 aa11.99□□□□□ -0.49
NUP188-201ENST00000372577 KIAA0754O94854 1291 aa11.99□□□□□ -0.49
NUP188-201ENST00000372577 APOBRQ0VD83 1088 aa11.99□□□□□ -0.49
NUP188-201ENST00000372577 PPP2R5BQ15173 497 aa11.99□□□□□ -0.49
NUP188-201ENST00000372577 SSH3Q8TE77 659 aa11.99□□□□□ -0.49
NUP188-201ENST00000372577 NAP1L4Q99733 375 aaKnown RBP11.99□□□□□ -0.49
NUP188-201ENST00000372577 ABCC3O15438 1527 aa11.99□□□□□ -0.49
NUP188-201ENST00000372577 ZNF521Q96K83 1311 aa11.99□□□□□ -0.49
NUP188-201ENST00000372577 TYRO3Q06418 890 aa11.98□□□□□ -0.49
NUP188-201ENST00000372577 BTG4Q9NY30 223 aa11.98□□□□□ -0.49
NUP188-201ENST00000372577 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.98□□□□□ -0.491e-6■■□□□ 12.1
NUP188-201ENST00000372577 RAB11FIP4Q86YS3 637 aa11.98□□□□□ -0.49
NUP188-201ENST00000372577 NAA15Q9BXJ9 866 aaKnown RBP11.98□□□□□ -0.49
NUP188-201ENST00000372577 SNX14Q9Y5W7 946 aa11.98□□□□□ -0.49
NUP188-201ENST00000372577 CCDC172P0C7W6 258 aa11.98□□□□□ -0.49
NUP188-201ENST00000372577 IDEP14735 1019 aa11.98□□□□□ -0.49
NUP188-201ENST00000372577 LTKP29376 864 aa11.98□□□□□ -0.49
NUP188-201ENST00000372577 N4BP3O15049 544 aa11.98□□□□□ -0.49
NUP188-201ENST00000372577 SUCLG2Q96I99 432 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms