RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 RABEP1Q15276 862 aa20.28■□□□□ 0.84
PHGDH-202ENST00000369409 HSCBQ8IWL3 235 aa20.28■□□□□ 0.84
PHGDH-202ENST00000369409 UQCRFS1P1P0C7P4 283 aa20.27■□□□□ 0.84
PHGDH-202ENST00000369409 NLGN1Q8N2Q7 840 aa20.27■□□□□ 0.84
PHGDH-202ENST00000369409 PTH1RQ03431 593 aa20.26■□□□□ 0.83
PHGDH-202ENST00000369409 ZNF589Q86UQ0 364 aaPredicted RBP20.26■□□□□ 0.83
PHGDH-202ENST00000369409 HSPA4P34932 840 aa20.26■□□□□ 0.83
PHGDH-202ENST00000369409 GRAPQ13588 217 aa20.26■□□□□ 0.83
PHGDH-202ENST00000369409 GRAPLQ8TC17 118 aaPredicted RBP20.26■□□□□ 0.83
PHGDH-202ENST00000369409 RPGRQ92834 1020 aaKnown RBP20.26■□□□□ 0.83
PHGDH-202ENST00000369409 SNX21Q969T3 373 aa20.26■□□□□ 0.83
PHGDH-202ENST00000369409 COL11A2P13942 1736 aaPredicted RBP20.26■□□□□ 0.83
PHGDH-202ENST00000369409 SF3B2Q13435 895 aaKnown RBP20.25■□□□□ 0.83
PHGDH-202ENST00000369409 CRY2Q49AN0 593 aa20.25■□□□□ 0.83
PHGDH-202ENST00000369409 MSL1Q68DK7 614 aa20.25■□□□□ 0.83
PHGDH-202ENST00000369409 SEC62Q99442 399 aaKnown RBP20.25■□□□□ 0.83
PHGDH-202ENST00000369409 CD2BP2O95400 341 aaKnown RBP20.24■□□□□ 0.83
PHGDH-202ENST00000369409 ANAPC15P60006 121 aa20.24■□□□□ 0.83
PHGDH-202ENST00000369409 UBE4AQ14139 1066 aa20.24■□□□□ 0.83
PHGDH-202ENST00000369409 SLC15A2Q16348 729 aa20.24■□□□□ 0.83
PHGDH-202ENST00000369409 SLFNL1Q499Z3 407 aa20.24■□□□□ 0.83
PHGDH-202ENST00000369409 WTIPA6NIX2 430 aaPredicted RBP20.24■□□□□ 0.83
PHGDH-202ENST00000369409 BAG6P46379 1132 aa20.24■□□□□ 0.83
PHGDH-202ENST00000369409 TICAM2Q86XR7 235 aa20.24■□□□□ 0.83
PHGDH-202ENST00000369409 STK32BQ9NY57 414 aa20.24■□□□□ 0.83
PHGDH-202ENST00000369409 MMP10P09238 476 aa20.23■□□□□ 0.83
PHGDH-202ENST00000369409 BCAMP50895 628 aa20.23■□□□□ 0.83
PHGDH-202ENST00000369409 RASGRF1Q13972 1273 aa20.23■□□□□ 0.83
PHGDH-202ENST00000369409 CCDC129Q6ZRS4 1044 aa20.23■□□□□ 0.83
PHGDH-202ENST00000369409 DEFB132Q7Z7B7 95 aa20.23■□□□□ 0.83
PHGDH-202ENST00000369409 HMG20BQ9P0W2 317 aa20.23■□□□□ 0.83
PHGDH-202ENST00000369409 CACNA1SQ13698 1873 aa20.23■□□□□ 0.83
PHGDH-202ENST00000369409 LRRC37AA6NMS7 1700 aa20.23■□□□□ 0.83
PHGDH-202ENST00000369409 RNF113AO15541 343 aaKnown RBP20.22■□□□□ 0.83
PHGDH-202ENST00000369409 CYP2E1P05181 493 aaPredicted RBP20.22■□□□□ 0.83
PHGDH-202ENST00000369409 MCMDC2Q4G0Z9 681 aa20.22■□□□□ 0.83
PHGDH-202ENST00000369409 ZMYM1Q5SVZ6 1142 aa20.22■□□□□ 0.83
PHGDH-202ENST00000369409 ANKRD2Q9GZV1 360 aa20.22■□□□□ 0.83
PHGDH-202ENST00000369409 KCNJ4P48050 445 aa20.22■□□□□ 0.83
PHGDH-202ENST00000369409 LRRFIP1Q32MZ4 808 aaKnown RBP20.22■□□□□ 0.83
PHGDH-202ENST00000369409 SLC51AQ86UW1 340 aa20.22■□□□□ 0.83
PHGDH-202ENST00000369409 SPATA5Q8NB90 893 aa20.22■□□□□ 0.83
PHGDH-202ENST00000369409 RBM8AQ9Y5S9 174 aaKnown RBP20.22■□□□□ 0.83
PHGDH-202ENST00000369409 TTF1Q15361 905 aaPredicted RBP20.21■□□□□ 0.83
PHGDH-202ENST00000369409 IL17RAQ96F46 866 aa20.21■□□□□ 0.83
PHGDH-202ENST00000369409 PIH1D3Q9NQM4 214 aaKnown RBP20.21■□□□□ 0.83
PHGDH-202ENST00000369409 HELLSQ9NRZ9 838 aa20.21■□□□□ 0.83
PHGDH-202ENST00000369409 PARP3Q9Y6F1 533 aa20.21■□□□□ 0.83
PHGDH-202ENST00000369409 MAST3O60307 1309 aa20.21■□□□□ 0.83
PHGDH-202ENST00000369409 GYG1P46976 350 aa20.2■□□□□ 0.82
PHGDH-202ENST00000369409 MAP4K1Q92918 833 aa20.2■□□□□ 0.82
PHGDH-202ENST00000369409 RBM17Q96I25 401 aaKnown RBP20.2■□□□□ 0.82
PHGDH-202ENST00000369409 SNX14Q9Y5W7 946 aa20.2■□□□□ 0.82
PHGDH-202ENST00000369409 ZNF804BA4D1E1 1349 aa20.2■□□□□ 0.82
PHGDH-202ENST00000369409 ZFYP08048 801 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-202ENST00000369409 PRPF40BQ6NWY9 871 aaKnown RBP20.2■□□□□ 0.82
PHGDH-202ENST00000369409 COL1A1P02452 1464 aaPredicted RBP20.19■□□□□ 0.82
PHGDH-202ENST00000369409 ST18O60284 1047 aa20.19■□□□□ 0.82
PHGDH-202ENST00000369409 KLRK1P26718 216 aa20.19■□□□□ 0.82
PHGDH-202ENST00000369409 RASEFQ8IZ41 740 aa20.19■□□□□ 0.82
PHGDH-202ENST00000369409 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.19■□□□□ 0.821e-14■□□□□ 11
PHGDH-202ENST00000369409 IQSEC3Q9UPP2 1182 aaPredicted RBP20.19■□□□□ 0.82
PHGDH-202ENST00000369409 KLRG2A4D1S0 409 aaPredicted RBP20.18■□□□□ 0.82
PHGDH-202ENST00000369409 K7ELQ4 463 aaPredicted RBP20.18■□□□□ 0.82
PHGDH-202ENST00000369409 M0R2C6 588 aa20.18■□□□□ 0.82
PHGDH-202ENST00000369409 IDH1O75874 414 aaKnown RBP20.18■□□□□ 0.82
PHGDH-202ENST00000369409 NECTIN1Q15223 517 aa20.18■□□□□ 0.82
PHGDH-202ENST00000369409 WASHC4Q2M389 1173 aa20.18■□□□□ 0.82
PHGDH-202ENST00000369409 CAVIN4Q5BKX8 364 aa20.18■□□□□ 0.82
PHGDH-202ENST00000369409 SPRYD3Q8NCJ5 442 aa20.18■□□□□ 0.82
PHGDH-202ENST00000369409 BRIP1Q9BX63 1249 aa20.18■□□□□ 0.82
PHGDH-202ENST00000369409 HOXA10P31260 410 aaPredicted RBP20.17■□□□□ 0.82
PHGDH-202ENST00000369409 NEK4P51957 841 aa20.17■□□□□ 0.82
PHGDH-202ENST00000369409 VPS37DQ86XT2 251 aa20.17■□□□□ 0.82
PHGDH-202ENST00000369409 APPBP2Q92624 585 aa20.17■□□□□ 0.82
PHGDH-202ENST00000369409 OSBP2Q969R2 916 aa20.17■□□□□ 0.82
PHGDH-202ENST00000369409 ANKIB1Q9P2G1 1089 aa20.17■□□□□ 0.82
PHGDH-202ENST00000369409 LTBP1Q14766 1721 aa20.16■□□□□ 0.82
PHGDH-202ENST00000369409 ADD2P35612 726 aa20.16■□□□□ 0.82
PHGDH-202ENST00000369409 CREB3L3Q68CJ9 461 aa20.16■□□□□ 0.82
PHGDH-202ENST00000369409 ZSCAN25Q6NSZ9 544 aa20.16■□□□□ 0.82
PHGDH-202ENST00000369409 FAM84BQ96KN1 310 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-202ENST00000369409 UPF3BQ9BZI7 483 aaKnown RBP20.16■□□□□ 0.82
PHGDH-202ENST00000369409 SLKQ9H2G2 1235 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-202ENST00000369409 GNL3LQ9NVN8 582 aaKnown RBP20.16■□□□□ 0.82
PHGDH-202ENST00000369409 XDHP47989 1333 aa20.16■□□□□ 0.82
PHGDH-202ENST00000369409 SLC9C2Q5TAH2 1124 aa20.16■□□□□ 0.82
PHGDH-202ENST00000369409 CRAMP1Q96RY5 1269 aa20.16■□□□□ 0.82
PHGDH-202ENST00000369409 WWC3Q9ULE0 1092 aa20.16■□□□□ 0.82
PHGDH-202ENST00000369409 SLC27A2O14975 620 aa20.15■□□□□ 0.82
PHGDH-202ENST00000369409 VPS53Q5VIR6 699 aa20.15■□□□□ 0.82
PHGDH-202ENST00000369409 KCNB2Q92953 911 aa20.15■□□□□ 0.82
PHGDH-202ENST00000369409 PDE6AP16499 860 aa20.14■□□□□ 0.81
PHGDH-202ENST00000369409 LAMA4Q16363 1823 aa20.14■□□□□ 0.81
PHGDH-202ENST00000369409 ZKSCAN1P17029 563 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-202ENST00000369409 FBXO33Q7Z6M2 555 aa20.13■□□□□ 0.81
PHGDH-202ENST00000369409 PUS7LQ9H0K6 701 aaKnown RBP20.13■□□□□ 0.81
PHGDH-202ENST00000369409 U3KPZ7 1027 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-202ENST00000369409 IRS2Q9Y4H2 1338 aa20.13■□□□□ 0.81
PHGDH-202ENST00000369409 MAST2Q6P0Q8 1798 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 293.9 ms