RNA–Protein interactions for RNA: ENST00000368102.5

SNHG28-201, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNHG28, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-201ENST00000368102 HLFQ16534 295 aa16.6■□□□□ 0.25
SNHG28-201ENST00000368102 GIGYF2Q6Y7W6 1299 aaKnown RBP16.6■□□□□ 0.25
SNHG28-201ENST00000368102 ZNF710Q8N1W2 664 aa16.6■□□□□ 0.25
SNHG28-201ENST00000368102 ZBTB38Q8NAP3 1195 aaPredicted RBP16.6■□□□□ 0.25
SNHG28-201ENST00000368102 CERKQ8TCT0 537 aa16.6■□□□□ 0.25
SNHG28-201ENST00000368102 SYTL4Q96C24 671 aaPredicted RBP16.6■□□□□ 0.25
SNHG28-201ENST00000368102 BCL9O00512 1426 aa16.59■□□□□ 0.25
SNHG28-201ENST00000368102 TOM1O60784 492 aa16.59■□□□□ 0.25
SNHG28-201ENST00000368102 KDM4AO75164 1064 aa16.59■□□□□ 0.25
SNHG28-201ENST00000368102 IFIT1P09914 478 aaKnown RBP16.59■□□□□ 0.25
SNHG28-201ENST00000368102 FTOQ9C0B1 505 aaKnown RBP eCLIP16.59■□□□□ 0.25
SNHG28-201ENST00000368102 ALDH8A1Q9H2A2 487 aaPredicted RBP16.59■□□□□ 0.25
SNHG28-201ENST00000368102 KIF3AQ9Y496 699 aa16.59■□□□□ 0.25
SNHG28-201ENST00000368102 U3KPZ7 1027 aaPredicted RBP16.59■□□□□ 0.25
SNHG28-201ENST00000368102 LAMA4Q16363 1823 aa16.59■□□□□ 0.25
SNHG28-201ENST00000368102 PALLDQ8WX93 1383 aa16.59■□□□□ 0.25
SNHG28-201ENST00000368102 CYP19A1P11511 503 aaPredicted RBP16.59■□□□□ 0.25
SNHG28-201ENST00000368102 HSP90B1P14625 803 aaKnown RBP16.59■□□□□ 0.25
SNHG28-201ENST00000368102 GPTP24298 496 aa16.59■□□□□ 0.25
SNHG28-201ENST00000368102 KRT32Q14532 448 aa16.59■□□□□ 0.25
SNHG28-201ENST00000368102 CHST3Q7LGC8 479 aa16.59■□□□□ 0.25
SNHG28-201ENST00000368102 SYNE4Q8N205 404 aa16.59■□□□□ 0.25
SNHG28-201ENST00000368102 SH3TC1Q8TE82 1336 aa16.58■□□□□ 0.25
SNHG28-201ENST00000368102 KRT85P78386 507 aa16.58■□□□□ 0.25
SNHG28-201ENST00000368102 PLA2G12BQ9BX93 195 aa16.58■□□□□ 0.25
SNHG28-201ENST00000368102 DACT1Q9NYF0 836 aa16.58■□□□□ 0.25
SNHG28-201ENST00000368102 FAM177BA6PVY3 158 aa16.58■□□□□ 0.24
SNHG28-201ENST00000368102 CSF1RP07333 972 aa16.58■□□□□ 0.24
SNHG28-201ENST00000368102 LUZP1Q86V48 1076 aa16.58■□□□□ 0.24
SNHG28-201ENST00000368102 BRF1Q92994 677 aa16.58■□□□□ 0.24
SNHG28-201ENST00000368102 NEK1Q96PY6 1258 aa16.58■□□□□ 0.24
SNHG28-201ENST00000368102 TAF7LQ5H9L4 462 aa16.57■□□□□ 0.24
SNHG28-201ENST00000368102 HELLSQ9NRZ9 838 aa16.57■□□□□ 0.24
SNHG28-201ENST00000368102 IFIT5Q13325 482 aaKnown RBP16.57■□□□□ 0.24
SNHG28-201ENST00000368102 NLRP10Q86W26 655 aa16.57■□□□□ 0.24
SNHG28-201ENST00000368102 FBXO3Q9UK99 471 aa16.57■□□□□ 0.24
SNHG28-201ENST00000368102 ZBTB1Q9Y2K1 713 aa16.57■□□□□ 0.24
SNHG28-201ENST00000368102 A0A087WWV3 80 aa16.56■□□□□ 0.24
SNHG28-201ENST00000368102 ZMYM1Q5SVZ6 1142 aa16.56■□□□□ 0.24
SNHG28-201ENST00000368102 PGBD1Q96JS3 809 aa16.56■□□□□ 0.24
SNHG28-201ENST00000368102 SPATA32Q96LK8 384 aa16.56■□□□□ 0.24
SNHG28-201ENST00000368102 COL14A1Q05707 1796 aaKnown RBP16.56■□□□□ 0.24
SNHG28-201ENST00000368102 NR1I2O75469 434 aa16.56■□□□□ 0.24
SNHG28-201ENST00000368102 ADORA1P30542 326 aa16.56■□□□□ 0.24
SNHG28-201ENST00000368102 SCRN1Q12765 414 aa16.56■□□□□ 0.24
SNHG28-201ENST00000368102 HSP90AB3PQ58FF7 597 aa16.56■□□□□ 0.24
SNHG28-201ENST00000368102 LEO1Q8WVC0 666 aaPredicted RBP16.56■□□□□ 0.24
SNHG28-201ENST00000368102 GTF3C6Q969F1 213 aa16.56■□□□□ 0.24
SNHG28-201ENST00000368102 KCNF1Q9H3M0 494 aa16.56■□□□□ 0.24
SNHG28-201ENST00000368102 NCOA5Q9HCD5 579 aaKnown RBP16.56■□□□□ 0.24
SNHG28-201ENST00000368102 AKAP2Q9Y2D5 859 aa16.56■□□□□ 0.24
SNHG28-201ENST00000368102 MRVI1Q9Y6F6 885 aa16.56■□□□□ 0.24
SNHG28-201ENST00000368102 ZSCAN20P17040 1043 aaPredicted RBP16.55■□□□□ 0.24
SNHG28-201ENST00000368102 CCT2P78371 535 aaKnown RBP16.55■□□□□ 0.24
SNHG28-201ENST00000368102 GORABQ5T7V8 394 aa16.55■□□□□ 0.24
SNHG28-201ENST00000368102 XAGE2Q96GT9 111 aa16.55■□□□□ 0.24
SNHG28-201ENST00000368102 NAP1L2Q9ULW6 460 aaPredicted RBP16.55■□□□□ 0.24
SNHG28-201ENST00000368102 FKBP4Q02790 459 aaKnown RBP eCLIP16.55■□□□□ 0.24
SNHG28-201ENST00000368102 APOBRQ0VD83 1088 aa16.55■□□□□ 0.24
SNHG28-201ENST00000368102 CCDC158Q5M9N0 1113 aa16.55■□□□□ 0.24
SNHG28-201ENST00000368102 TICAM2Q86XR7 235 aa16.55■□□□□ 0.24
SNHG28-201ENST00000368102 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.55■□□□□ 0.24
SNHG28-201ENST00000368102 GTPBP4Q9BZE4 634 aaKnown RBP16.55■□□□□ 0.24
SNHG28-201ENST00000368102 NUP62CLQ9H1M0 184 aa16.55■□□□□ 0.24
SNHG28-201ENST00000368102 PYCARDQ9ULZ3 195 aa16.55■□□□□ 0.24
SNHG28-201ENST00000368102 CDHR2Q9BYE9 1310 aa16.54■□□□□ 0.24
SNHG28-201ENST00000368102 RNF113AO15541 343 aaKnown RBP16.54■□□□□ 0.24
SNHG28-201ENST00000368102 HSPA1LP34931 641 aa16.54■□□□□ 0.24
SNHG28-201ENST00000368102 GUCY1B3Q02153 619 aa16.54■□□□□ 0.24
SNHG28-201ENST00000368102 TTLL5Q6EMB2 1281 aa16.54■□□□□ 0.24
SNHG28-201ENST00000368102 KIAA1524Q8TCG1 905 aa16.54■□□□□ 0.24
SNHG28-201ENST00000368102 ITGB4P16144 1822 aa16.54■□□□□ 0.24
SNHG28-201ENST00000368102 TYRO3Q06418 890 aa16.54■□□□□ 0.24
SNHG28-201ENST00000368102 TTC39AQ5SRH9 613 aa16.54■□□□□ 0.24
SNHG28-201ENST00000368102 TTLL11Q8NHH1 800 aa16.54■□□□□ 0.24
SNHG28-201ENST00000368102 DSCC1Q9BVC3 393 aa16.54■□□□□ 0.24
SNHG28-201ENST00000368102 GPHNQ9NQX3 736 aaPredicted RBP16.54■□□□□ 0.24
SNHG28-201ENST00000368102 PHLPP1O60346 1717 aa16.53■□□□□ 0.24
SNHG28-201ENST00000368102 FGD1P98174 961 aa16.53■□□□□ 0.24
SNHG28-201ENST00000368102 CHAF1AQ13111 956 aaPredicted RBP16.53■□□□□ 0.24
SNHG28-201ENST00000368102 GREM2Q9H772 168 aa16.53■□□□□ 0.24
SNHG28-201ENST00000368102 TBC1D2BQ9UPU7 963 aa16.53■□□□□ 0.24
SNHG28-201ENST00000368102 MAST3O60307 1309 aa16.53■□□□□ 0.24
SNHG28-201ENST00000368102 GOLGA6L6A8MZA4 724 aa16.53■□□□□ 0.24
SNHG28-201ENST00000368102 CCDC192P0DO97 292 aa16.53■□□□□ 0.24
SNHG28-201ENST00000368102 ITGA6P23229 1130 aa16.53■□□□□ 0.24
SNHG28-201ENST00000368102 MAP3K11Q16584 847 aa16.53■□□□□ 0.24
SNHG28-201ENST00000368102 ANO6Q4KMQ2 910 aa16.53■□□□□ 0.24
SNHG28-201ENST00000368102 BCL2L12Q9HB09 334 aa16.53■□□□□ 0.24
SNHG28-201ENST00000368102 PRDM10Q9NQV6 1147 aa16.53■□□□□ 0.24
SNHG28-201ENST00000368102 TRMT112Q9UI30 125 aaKnown RBP16.53■□□□□ 0.24
SNHG28-201ENST00000368102 HSPD1P10809 573 aaKnown RBP16.52■□□□□ 0.24
SNHG28-201ENST00000368102 RESTQ13127 1097 aa16.52■□□□□ 0.24
SNHG28-201ENST00000368102 LDHAL6AQ6ZMR3 332 aa16.52■□□□□ 0.24
SNHG28-201ENST00000368102 RAB11FIP4Q86YS3 637 aa16.52■□□□□ 0.24
SNHG28-201ENST00000368102 TNMDQ9H2S6 317 aa16.52■□□□□ 0.24
SNHG28-201ENST00000368102 GOLGA6L4A6NEF3 574 aa16.52■□□□□ 0.23
SNHG28-201ENST00000368102 IRS4O14654 1257 aaPredicted RBP16.52■□□□□ 0.23
SNHG28-201ENST00000368102 CTDNEP1O95476 244 aa16.52■□□□□ 0.23
SNHG28-201ENST00000368102 PDCP20941 246 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms