RNA–Protein interactions for RNA: ENST00000367047.5

CD46-209, Transcript of CD46 molecule, humanhuman

TSL 5 BASIC

Gene CD46, Length 3,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-209ENST00000367047 IL1RAPL2Q9NP60 686 aa9.68□□□□□ -0.86
CD46-209ENST00000367047 IQGAP1P46940 1657 aa9.68□□□□□ -0.86
CD46-209ENST00000367047 TRAPPC8Q9Y2L5 1435 aa9.68□□□□□ -0.86
CD46-209ENST00000367047 ADGRB2O60241 1585 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 AP1G2O75843 785 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 CRYMQ14894 314 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 PRPF40BQ6NWY9 871 aaKnown RBP9.67□□□□□ -0.86
CD46-209ENST00000367047 SRGAP1Q7Z6B7 1085 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 ZNF483Q8TF39 744 aaPredicted RBP9.67□□□□□ -0.86
CD46-209ENST00000367047 PHACTR3Q96KR7 559 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 GOLPH3LQ9H4A5 285 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 KAT14Q9H8E8 782 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 TFRCP02786 760 aaKnown RBP9.67□□□□□ -0.86
CD46-209ENST00000367047 DPCR1Q3MIW9 517 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 PREPLQ4J6C6 727 aaPredicted RBP9.67□□□□□ -0.86
CD46-209ENST00000367047 NUTM1Q86Y26 1132 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 OTUD6BQ8N6M0 293 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 PDILTQ8N807 584 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 KCNB2Q92953 911 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 ITFG2Q969R8 447 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 THOC1Q96FV9 657 aaKnown RBP9.67□□□□□ -0.86
CD46-209ENST00000367047 GDAP1L1Q96MZ0 367 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 FTOQ9C0B1 505 aaKnown RBP eCLIP9.67□□□□□ -0.86
CD46-209ENST00000367047 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.67□□□□□ -0.86
CD46-209ENST00000367047 RPGRIP1LQ68CZ1 1315 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 SHTN1A0MZ66 631 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 CUTAO60888 179 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 ATP1A3P13637 1013 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 USP5P45974 858 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 IRAK1P51617 712 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 FOSBP53539 338 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 DDR1Q08345 913 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 ARMC3Q5W041 872 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 ARMC2Q8NEN0 867 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 LSG1Q9H089 658 aaKnown RBP9.67□□□□□ -0.86
CD46-209ENST00000367047 KIF9Q9HAQ2 790 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 ETAA1Q9NY74 926 aa9.67□□□□□ -0.86
CD46-209ENST00000367047 CHD1O14646 1710 aa9.66□□□□□ -0.86
CD46-209ENST00000367047 KNDC1Q76NI1 1749 aa9.66□□□□□ -0.86
CD46-209ENST00000367047 SHANK2Q9UPX8 1470 aa9.66□□□□□ -0.86
CD46-209ENST00000367047 ARHGEF40Q8TER5 1519 aa9.66□□□□□ -0.86
CD46-209ENST00000367047 A0A1B0GUA9 196 aa9.66□□□□□ -0.86
CD46-209ENST00000367047 KIAA0754O94854 1291 aa9.66□□□□□ -0.86
CD46-209ENST00000367047 FANCCQ00597 558 aa9.66□□□□□ -0.86
CD46-209ENST00000367047 ZC3H12AQ5D1E8 599 aaKnown RBP9.66□□□□□ -0.86
CD46-209ENST00000367047 ANKRD18AQ8IVF6 992 aa9.66□□□□□ -0.86
CD46-209ENST00000367047 ZNF513Q8N8E2 541 aaPredicted RBP9.66□□□□□ -0.86
CD46-209ENST00000367047 KIFC2Q96AC6 838 aa9.66□□□□□ -0.86
CD46-209ENST00000367047 DESI2Q9BSY9 194 aa9.66□□□□□ -0.86
CD46-209ENST00000367047 SPATS2LQ9NUQ6 558 aaKnown RBP9.66□□□□□ -0.86
CD46-209ENST00000367047 RAB21Q9UL25 225 aa9.66□□□□□ -0.86
CD46-209ENST00000367047 POTEB2H3BUK9 544 aa9.66□□□□□ -0.86
CD46-209ENST00000367047 SYF2O95926 243 aaKnown RBP9.66□□□□□ -0.86
CD46-209ENST00000367047 SERPINC1P01008 464 aa9.66□□□□□ -0.86
CD46-209ENST00000367047 MYBL2P10244 700 aa9.66□□□□□ -0.86
CD46-209ENST00000367047 CFAP100Q494V2 611 aa9.66□□□□□ -0.86
CD46-209ENST00000367047 TATDN2Q93075 761 aa9.66□□□□□ -0.86
CD46-209ENST00000367047 H3BQV1 296 aa9.65□□□□□ -0.86
CD46-209ENST00000367047 RPSAP08865 295 aaKnown RBP9.65□□□□□ -0.86
CD46-209ENST00000367047 ADCY2Q08462 1091 aa9.65□□□□□ -0.86
CD46-209ENST00000367047 IFFO2Q5TF58 517 aa9.65□□□□□ -0.86
CD46-209ENST00000367047 TOGARAM2Q6ZUX3 1019 aa9.65□□□□□ -0.86
CD46-209ENST00000367047 UBASH3AP57075 661 aa9.65□□□□□ -0.86
CD46-209ENST00000367047 SNX1Q13596 522 aa9.65□□□□□ -0.86
CD46-209ENST00000367047 CEP112Q8N8E3 955 aa9.65□□□□□ -0.86
CD46-209ENST00000367047 SH3GL3Q99963 347 aa9.65□□□□□ -0.86
CD46-209ENST00000367047 LZTFL1Q9NQ48 299 aa9.65□□□□□ -0.86
CD46-209ENST00000367047 BSDC1Q9NW68 430 aaPredicted RBP9.65□□□□□ -0.86
CD46-209ENST00000367047 SALL3Q9BXA9 1300 aa9.65□□□□□ -0.87
CD46-209ENST00000367047 TTC36A6NLP5 189 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 F6X3S4 739 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 ARHGAP6O43182 974 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 ZNF202O95125 648 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 SSBP05455 408 aaKnown RBP eCLIP9.64□□□□□ -0.87
CD46-209ENST00000367047 TOP1P11387 765 aaKnown RBP9.64□□□□□ -0.87
CD46-209ENST00000367047 GRIK3Q13003 919 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 DCTN1Q14203 1278 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 CEP85LQ5SZL2 805 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 FSIP1Q8NA03 581 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 FAM76AQ8TAV0 307 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 DPF2Q92785 391 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 GBP3Q9H0R5 595 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 NUCKS1Q9H1E3 243 aaKnown RBP9.64□□□□□ -0.87
CD46-209ENST00000367047 KLC4Q9NSK0 619 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 CFAP45Q9UL16 551 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 ADGRF5Q8IZF2 1346 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 IQGAP2Q13576 1575 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 KIF24Q5T7B8 1368 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 RAB11FIP3O75154 756 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 RTN2O75298 545 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 FCHSD2O94868 740 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 PRPF6O94906 941 aaKnown RBP9.64□□□□□ -0.87
CD46-209ENST00000367047 IPO7O95373 1038 aaKnown RBP9.64□□□□□ -0.87
CD46-209ENST00000367047 ME1P48163 572 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 FNTAP49354 379 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 PSMD2Q13200 908 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 COL9A3Q14050 684 aaPredicted RBP9.64□□□□□ -0.87
CD46-209ENST00000367047 E2F5Q15329 346 aa9.64□□□□□ -0.87
CD46-209ENST00000367047 MSL3Q8N5Y2 521 aaKnown RBP9.64□□□□□ -0.87
CD46-209ENST00000367047 MSANTD4Q8NCY6 345 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms