RNA–Protein interactions for RNA: ENST00000367041.5

CD46-207, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,281 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-207ENST00000367041 FTOQ9C0B1 505 aaKnown RBP eCLIP9.06□□□□□ -0.96
CD46-207ENST00000367041 HMG20BQ9P0W2 317 aa9.06□□□□□ -0.96
CD46-207ENST00000367041 JRKLQ9Y4A0 524 aa9.06□□□□□ -0.96
CD46-207ENST00000367041 SALL1Q9NSC2 1324 aa9.06□□□□□ -0.96
CD46-207ENST00000367041 HIP1O00291 1037 aa9.06□□□□□ -0.96
CD46-207ENST00000367041 NBPF7P0C2Y1 421 aaPredicted RBP9.06□□□□□ -0.96
CD46-207ENST00000367041 LONRF2Q1L5Z9 754 aa9.06□□□□□ -0.96
CD46-207ENST00000367041 JAKMIP3Q5VZ66 844 aa9.06□□□□□ -0.96
CD46-207ENST00000367041 CCDC34Q96HJ3 373 aa9.06□□□□□ -0.96
CD46-207ENST00000367041 TCEANC2Q96MN5 208 aa9.06□□□□□ -0.96
CD46-207ENST00000367041 USP28Q96RU2 1077 aa9.06□□□□□ -0.96
CD46-207ENST00000367041 BABAM1Q9NWV8 329 aa9.06□□□□□ -0.96
CD46-207ENST00000367041 KIAA1468Q9P260 1216 aa9.06□□□□□ -0.96
CD46-207ENST00000367041 A0A1W2PQ27 194 aa9.06□□□□□ -0.96
CD46-207ENST00000367041 A0A1W2PQ64 194 aa9.06□□□□□ -0.96
CD46-207ENST00000367041 A0A1W2PQD8 194 aa9.06□□□□□ -0.96
CD46-207ENST00000367041 IKBKBO14920 756 aa9.06□□□□□ -0.96
CD46-207ENST00000367041 KINO60870 393 aaKnown RBP9.06□□□□□ -0.96
CD46-207ENST00000367041 URI1O94763 535 aaPredicted RBP9.06□□□□□ -0.96
CD46-207ENST00000367041 CORO7P57737 925 aa9.06□□□□□ -0.96
CD46-207ENST00000367041 BRD3Q15059 726 aa9.06□□□□□ -0.96
CD46-207ENST00000367041 GORABQ5T7V8 394 aa9.06□□□□□ -0.96
CD46-207ENST00000367041 RAB21Q9UL25 225 aa9.06□□□□□ -0.96
CD46-207ENST00000367041 COL15A1P39059 1388 aa9.05□□□□□ -0.96
CD46-207ENST00000367041 NCAPD2Q15021 1401 aa9.05□□□□□ -0.96
CD46-207ENST00000367041 A0A0D9SFI3 127 aa9.05□□□□□ -0.96
CD46-207ENST00000367041 ALDH1L1O75891 902 aa9.05□□□□□ -0.96
CD46-207ENST00000367041 CTDNEP1O95476 244 aa9.05□□□□□ -0.96
CD46-207ENST00000367041 ATP2B1P20020 1258 aa9.05□□□□□ -0.96
CD46-207ENST00000367041 BEND6Q5SZJ8 279 aaPredicted RBP9.05□□□□□ -0.96
CD46-207ENST00000367041 SWT1Q5T5J6 900 aaKnown RBP9.05□□□□□ -0.96
CD46-207ENST00000367041 BEND3Q5T5X7 828 aa9.05□□□□□ -0.96
CD46-207ENST00000367041 CCDC73Q6ZRK6 1079 aa9.05□□□□□ -0.96
CD46-207ENST00000367041 SECISBP2LQ93073 1101 aaKnown RBP9.05□□□□□ -0.96
CD46-207ENST00000367041 NWD1Q149M9 1564 aa9.05□□□□□ -0.96
CD46-207ENST00000367041 TXLNAP40222 546 aa9.05□□□□□ -0.96
CD46-207ENST00000367041 LMAN1P49257 510 aa9.05□□□□□ -0.96
CD46-207ENST00000367041 APOBRQ0VD83 1088 aa9.05□□□□□ -0.96
CD46-207ENST00000367041 HSP90AB2PQ58FF8 381 aa9.05□□□□□ -0.96
CD46-207ENST00000367041 FOXR1Q6PIV2 292 aa9.05□□□□□ -0.96
CD46-207ENST00000367041 HOMER1Q86YM7 354 aa9.05□□□□□ -0.96
CD46-207ENST00000367041 WDR24Q96S15 920 aa9.05□□□□□ -0.96
CD46-207ENST00000367041 ESF1Q9H501 851 aaKnown RBP9.05□□□□□ -0.96
CD46-207ENST00000367041 TECPR2O15040 1411 aa9.05□□□□□ -0.96
CD46-207ENST00000367041 KDM3BQ7LBC6 1761 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 LOC102724159A0A0B4J2E5 919 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 EIF3CLB5ME19 914 aaKnown RBP9.04□□□□□ -0.96
CD46-207ENST00000367041 SMC2O95347 1197 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 GSCP56915 257 aaPredicted RBP9.04□□□□□ -0.96
CD46-207ENST00000367041 PPP2R3AQ06190 1150 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 SCRN1Q12765 414 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 PWP2Q15269 919 aaKnown RBP9.04□□□□□ -0.96
CD46-207ENST00000367041 ADALQ6DHV7 355 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 NSUN7Q8NE18 718 aaKnown RBP9.04□□□□□ -0.96
CD46-207ENST00000367041 ERCC4Q92889 916 aaPredicted RBP9.04□□□□□ -0.96
CD46-207ENST00000367041 NUDT16Q96DE0 195 aaKnown RBP9.04□□□□□ -0.96
CD46-207ENST00000367041 MYCBPQ99417 103 aaPredicted RBP9.04□□□□□ -0.96
CD46-207ENST00000367041 EIF3CQ99613 913 aaKnown RBP9.04□□□□□ -0.96
CD46-207ENST00000367041 SBNO1A3KN83 1393 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 PFKFB2O60825 505 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 NLRP12P59046 1061 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 STK3Q13188 491 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 TBX2Q13207 712 aaPredicted RBP9.04□□□□□ -0.96
CD46-207ENST00000367041 MLECQ14165 292 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 TTC31Q49AM3 519 aaPredicted RBP9.04□□□□□ -0.96
CD46-207ENST00000367041 FSIP1Q8NA03 581 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 MSANTD4Q8NCY6 345 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 PCDHA7Q9UN72 937 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 PPP2R2CQ9Y2T4 447 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 FANCCQ00597 558 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 VSTM4Q8IW00 320 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 GOLGA6L1Q8N7Z2 621 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 PHAXQ9H814 394 aaKnown RBP9.04□□□□□ -0.96
CD46-207ENST00000367041 ANKZF1Q9H8Y5 726 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 RTEL1Q9NZ71 1219 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 MKRN1Q9UHC7 482 aaKnown RBP9.04□□□□□ -0.96
CD46-207ENST00000367041 CCDC61Q9Y6R9 512 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 NCKAP5LQ9HCH0 1330 aa9.04□□□□□ -0.96
CD46-207ENST00000367041 IGSF1Q8N6C5 1336 aa9.03□□□□□ -0.96
CD46-207ENST00000367041 ZSCAN12O43309 604 aa9.03□□□□□ -0.96
CD46-207ENST00000367041 TAF5LO75529 589 aa9.03□□□□□ -0.96
CD46-207ENST00000367041 NOM1Q5C9Z4 860 aaKnown RBP9.03□□□□□ -0.96
CD46-207ENST00000367041 CLASRPQ8N2M8 674 aaKnown RBP9.03□□□□□ -0.96
CD46-207ENST00000367041 MRPS27Q92552 414 aaKnown RBP9.03□□□□□ -0.96
CD46-207ENST00000367041 CHMP4CQ96CF2 233 aa9.03□□□□□ -0.96
CD46-207ENST00000367041 AGXT2Q9BYV1 514 aa9.03□□□□□ -0.96
CD46-207ENST00000367041 RNF216Q9NWF9 866 aaPredicted RBP9.03□□□□□ -0.96
CD46-207ENST00000367041 L1RE1Q9UN81 338 aa9.03□□□□□ -0.96
CD46-207ENST00000367041 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.03□□□□□ -0.96
CD46-207ENST00000367041 PRR36Q9H6K5 1346 aa9.03□□□□□ -0.96
CD46-207ENST00000367041 NUTM2FA1L443 756 aa9.03□□□□□ -0.96
CD46-207ENST00000367041 ARHGAP6O43182 974 aa9.03□□□□□ -0.96
CD46-207ENST00000367041 NRDCO43847 1150 aa9.03□□□□□ -0.96
CD46-207ENST00000367041 NDUFA8P51970 172 aa9.03□□□□□ -0.96
CD46-207ENST00000367041 NUTM2GQ5VZR2 741 aa9.03□□□□□ -0.96
CD46-207ENST00000367041 LRRC31Q6UY01 552 aa9.03□□□□□ -0.96
CD46-207ENST00000367041 ZNF589Q86UQ0 364 aaPredicted RBP9.03□□□□□ -0.96
CD46-207ENST00000367041 DPF2Q92785 391 aa9.03□□□□□ -0.96
CD46-207ENST00000367041 GOLGA1Q92805 767 aa9.03□□□□□ -0.96
CD46-207ENST00000367041 UTP14AQ9BVJ6 771 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms