RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 RTL1A6NKG5 1358 aa13.46□□□□□ -0.25
PRKN-206ENST00000366898 ATP5J2-PTCD1G3V325 749 aa13.46□□□□□ -0.25
PRKN-206ENST00000366898 ECM2O94769 699 aaPredicted RBP13.46□□□□□ -0.25
PRKN-206ENST00000366898 TATP17735 454 aaPredicted RBP13.46□□□□□ -0.25
PRKN-206ENST00000366898 RBBP5Q15291 538 aaKnown RBP13.46□□□□□ -0.25
PRKN-206ENST00000366898 PIK3R4Q99570 1358 aa13.46□□□□□ -0.26
PRKN-206ENST00000366898 CPA1P15085 419 aa13.46□□□□□ -0.26
PRKN-206ENST00000366898 PSMA5P28066 241 aa13.46□□□□□ -0.26
PRKN-206ENST00000366898 ATP2B2Q01814 1243 aa13.46□□□□□ -0.26
PRKN-206ENST00000366898 CCDC121Q6ZUS5 278 aa13.46□□□□□ -0.26
PRKN-206ENST00000366898 KCNH5Q8NCM2 988 aa13.46□□□□□ -0.26
PRKN-206ENST00000366898 CEP89Q96ST8 783 aa13.46□□□□□ -0.26
PRKN-206ENST00000366898 PNPLA6Q8IY17 1366 aa13.45□□□□□ -0.26
PRKN-206ENST00000366898 SYT1P21579 422 aa13.45□□□□□ -0.26
PRKN-206ENST00000366898 ESYT1Q9BSJ8 1104 aa13.45□□□□□ -0.26
PRKN-206ENST00000366898 SETD1BQ9UPS6 1966 aaKnown RBP13.45□□□□□ -0.26
PRKN-206ENST00000366898 ATP7BP35670 1465 aa13.45□□□□□ -0.26
PRKN-206ENST00000366898 GJB2P29033 226 aa13.45□□□□□ -0.26
PRKN-206ENST00000366898 TRIM29Q14134 588 aa13.45□□□□□ -0.26
PRKN-206ENST00000366898 KRT28Q7Z3Y7 464 aa13.45□□□□□ -0.26
PRKN-206ENST00000366898 MYD88Q99836 296 aa13.45□□□□□ -0.26
PRKN-206ENST00000366898 MKRN1Q9UHC7 482 aaKnown RBP13.45□□□□□ -0.26
PRKN-206ENST00000366898 KIAA1210Q9ULL0 1709 aa13.45□□□□□ -0.26
PRKN-206ENST00000366898 ARHGEF40Q8TER5 1519 aa13.45□□□□□ -0.26
PRKN-206ENST00000366898 PPFIA3O75145 1194 aa13.45□□□□□ -0.26
PRKN-206ENST00000366898 ACTN2P35609 894 aa13.45□□□□□ -0.26
PRKN-206ENST00000366898 AOPEPQ8N6M6 819 aa13.45□□□□□ -0.26
PRKN-206ENST00000366898 CCDC150Q8NCX0 1101 aa13.44□□□□□ -0.26
PRKN-206ENST00000366898 DBF4Q9UBU7 674 aaPredicted RBP13.44□□□□□ -0.26
PRKN-206ENST00000366898 SBNO1A3KN83 1393 aa13.44□□□□□ -0.26
PRKN-206ENST00000366898 CTAGE15A4D2H0 777 aa13.44□□□□□ -0.26
PRKN-206ENST00000366898 CTAGE8P0CG41 777 aa13.44□□□□□ -0.26
PRKN-206ENST00000366898 MAP2K1Q02750 393 aaPredicted RBP13.44□□□□□ -0.26
PRKN-206ENST00000366898 MSL1Q68DK7 614 aa13.44□□□□□ -0.26
PRKN-206ENST00000366898 CPLX2Q6PUV4 134 aaKnown RBP13.44□□□□□ -0.26
PRKN-206ENST00000366898 CTAGE6Q86UF2 777 aa13.44□□□□□ -0.26
PRKN-206ENST00000366898 CTAGE4Q8IX94 777 aa13.44□□□□□ -0.26
PRKN-206ENST00000366898 PRPF38AQ8NAV1 312 aaKnown RBP13.44□□□□□ -0.26
PRKN-206ENST00000366898 AFAP1L1Q8TED9 768 aa13.44□□□□□ -0.26
PRKN-206ENST00000366898 CCDC113Q9H0I3 377 aa13.44□□□□□ -0.26
PRKN-206ENST00000366898 STX1AQ16623 288 aa13.44□□□□□ -0.26
PRKN-206ENST00000366898 N4BP2L2Q92802 583 aaPredicted RBP13.44□□□□□ -0.26
PRKN-206ENST00000366898 GDAP1L1Q96MZ0 367 aa13.44□□□□□ -0.26
PRKN-206ENST00000366898 UTP14AQ9BVJ6 771 aaKnown RBP13.44□□□□□ -0.26
PRKN-206ENST00000366898 NRBP1Q9UHY1 535 aa13.44□□□□□ -0.26
PRKN-206ENST00000366898 GCP02774 474 aa13.43□□□□□ -0.26
PRKN-206ENST00000366898 CCDC175P0C221 793 aa13.43□□□□□ -0.26
PRKN-206ENST00000366898 SETSIPP0DME0 302 aa13.43□□□□□ -0.26
PRKN-206ENST00000366898 LMOD1P29536 600 aaPredicted RBP13.43□□□□□ -0.26
PRKN-206ENST00000366898 GUCY1B3Q02153 619 aa13.43□□□□□ -0.26
PRKN-206ENST00000366898 ZSCAN25Q6NSZ9 544 aa13.43□□□□□ -0.26
PRKN-206ENST00000366898 ZNF710Q8N1W2 664 aa13.43□□□□□ -0.26
PRKN-206ENST00000366898 CALR3Q96L12 384 aaKnown RBP13.43□□□□□ -0.26
PRKN-206ENST00000366898 LIMCH1Q9UPQ0 1083 aa13.43□□□□□ -0.26
PRKN-206ENST00000366898 MAP3K5Q99683 1374 aa13.43□□□□□ -0.26
PRKN-206ENST00000366898 UBAP1LF5GYI3 381 aa13.43□□□□□ -0.26
PRKN-206ENST00000366898 EIF5P55010 431 aaKnown RBP13.43□□□□□ -0.26
PRKN-206ENST00000366898 FAM76AQ8TAV0 307 aa13.43□□□□□ -0.26
PRKN-206ENST00000366898 KLHDC4Q8TBB5 520 aa13.43□□□□□ -0.26
PRKN-206ENST00000366898 ODF2LQ9ULJ1 636 aa13.43□□□□□ -0.26
PRKN-206ENST00000366898 AATKQ6ZMQ8 1374 aa13.43□□□□□ -0.26
PRKN-206ENST00000366898 CABP4P57796 275 aa13.43□□□□□ -0.26
PRKN-206ENST00000366898 GEMIN8Q9NWZ8 242 aaKnown RBP13.43□□□□□ -0.26
PRKN-206ENST00000366898 SF3A3Q12874 501 aaKnown RBP eCLIP13.42□□□□□ -0.26
PRKN-206ENST00000366898 POTEDQ86YR6 584 aa13.42□□□□□ -0.26
PRKN-206ENST00000366898 FSIP1Q8NA03 581 aa13.42□□□□□ -0.26
PRKN-206ENST00000366898 MRFAP1L1Q96HT8 127 aa13.42□□□□□ -0.26
PRKN-206ENST00000366898 LZTFL1Q9NQ48 299 aa13.42□□□□□ -0.26
PRKN-206ENST00000366898 E2F5Q15329 346 aa13.42□□□□□ -0.26
PRKN-206ENST00000366898 CEP85LQ5SZL2 805 aa13.42□□□□□ -0.26
PRKN-206ENST00000366898 FKBP15Q5T1M5 1219 aa13.42□□□□□ -0.26
PRKN-206ENST00000366898 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.42□□□□□ -0.26
PRKN-206ENST00000366898 WDHD1O75717 1129 aaPredicted RBP13.42□□□□□ -0.26
PRKN-206ENST00000366898 SLFN14P0C7P3 912 aa13.42□□□□□ -0.26
PRKN-206ENST00000366898 BLOC1S2Q6QNY1 142 aa13.42□□□□□ -0.26
PRKN-206ENST00000366898 MMS22LQ6ZRQ5 1243 aa13.42□□□□□ -0.26
PRKN-206ENST00000366898 TOM1L2Q6ZVM7 507 aa13.42□□□□□ -0.26
PRKN-206ENST00000366898 CEP112Q8N8E3 955 aa13.42□□□□□ -0.26
PRKN-206ENST00000366898 MRFAP1Q9Y605 127 aa13.42□□□□□ -0.26
PRKN-206ENST00000366898 ZC3H13Q5T200 1668 aaKnown RBP13.42□□□□□ -0.26
PRKN-206ENST00000366898 PPLO60437 1756 aa13.42□□□□□ -0.26
PRKN-206ENST00000366898 KLHL10Q6JEL2 608 aa13.42□□□□□ -0.26
PRKN-206ENST00000366898 MAATS1Q7Z4T9 603 aa13.42□□□□□ -0.26
PRKN-206ENST00000366898 USP44Q9H0E7 712 aa13.42□□□□□ -0.26
PRKN-206ENST00000366898 USP6P35125 1406 aa13.41□□□□□ -0.26
PRKN-206ENST00000366898 CHMLP26374 656 aa13.41□□□□□ -0.26
PRKN-206ENST00000366898 MAGEA9P43362 315 aa13.41□□□□□ -0.26
PRKN-206ENST00000366898 SPECC1Q5M775 1068 aa13.41□□□□□ -0.26
PRKN-206ENST00000366898 UNC5CLQ8IV45 518 aa13.41□□□□□ -0.26
PRKN-206ENST00000366898 NECAB1Q8N987 351 aa13.41□□□□□ -0.26
PRKN-206ENST00000366898 BAIAP2L1Q9UHR4 511 aa13.41□□□□□ -0.26
PRKN-206ENST00000366898 PALD1Q9ULE6 856 aa13.41□□□□□ -0.26
PRKN-206ENST00000366898 CPS1P31327 1500 aa13.41□□□□□ -0.26
PRKN-206ENST00000366898 CCT5P48643 541 aa13.41□□□□□ -0.26
PRKN-206ENST00000366898 ZNF75DP51815 510 aa13.41□□□□□ -0.26
PRKN-206ENST00000366898 KMT5BQ4FZB7 885 aa13.41□□□□□ -0.26
PRKN-206ENST00000366898 KAT6BQ8WYB5 2073 aa13.41□□□□□ -0.26
PRKN-206ENST00000366898 ZRSR2Q15696 482 aaKnown RBP13.41□□□□□ -0.26
PRKN-206ENST00000366898 NFATC2IPQ8NCF5 419 aa13.41□□□□□ -0.26
PRKN-206ENST00000366898 IFNKQ9P0W0 207 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms