RNA–Protein interactions for RNA: ENST00000366782.5

PSEN2-201, Transcript of presenilin 2, humanhuman

TSL 1 (best) BASIC

Gene PSEN2, Length 2,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN2-201ENST00000366782 PTGS1P23219 599 aa17.03■□□□□ 0.32
PSEN2-201ENST00000366782 ZCRB1Q8TBF4 217 aaKnown RBP17.03■□□□□ 0.32
PSEN2-201ENST00000366782 LLPHQ9BRT6 129 aaKnown RBP17.03■□□□□ 0.32
PSEN2-201ENST00000366782 ZSCAN16Q9H4T2 348 aaPredicted RBP17.03■□□□□ 0.32
PSEN2-201ENST00000366782 HMGB1P09429 215 aaKnown RBP17.02■□□□□ 0.32
PSEN2-201ENST00000366782 OSBP2Q969R2 916 aa17.02■□□□□ 0.32
PSEN2-201ENST00000366782 CCDC94Q9BW85 323 aaPredicted RBP17.02■□□□□ 0.32
PSEN2-201ENST00000366782 DNAJC25Q9H1X3 360 aa17.02■□□□□ 0.32
PSEN2-201ENST00000366782 FOXP2O15409 715 aa17.02■□□□□ 0.31
PSEN2-201ENST00000366782 RNF113AO15541 343 aaKnown RBP17.02■□□□□ 0.31
PSEN2-201ENST00000366782 CCDC191Q8NCU4 936 aa17.02■□□□□ 0.31
PSEN2-201ENST00000366782 GPHNQ9NQX3 736 aaPredicted RBP17.02■□□□□ 0.31
PSEN2-201ENST00000366782 NRBP1Q9UHY1 535 aa17.02■□□□□ 0.31
PSEN2-201ENST00000366782 ZHX1Q9UKY1 873 aaPredicted RBP17.02■□□□□ 0.31
PSEN2-201ENST00000366782 SALL1Q9NSC2 1324 aa17.01■□□□□ 0.31
PSEN2-201ENST00000366782 ILDR1Q86SU0 546 aaPredicted RBP17.01■□□□□ 0.31
PSEN2-201ENST00000366782 GOLPH3LQ9H4A5 285 aa17.01■□□□□ 0.31
PSEN2-201ENST00000366782 PDIA3P30101 505 aaKnown RBP17.01■□□□□ 0.31
PSEN2-201ENST00000366782 ADORA1P30542 326 aa17.01■□□□□ 0.31
PSEN2-201ENST00000366782 USP28Q96RU2 1077 aa17.01■□□□□ 0.31
PSEN2-201ENST00000366782 CFAP45Q9UL16 551 aa17.01■□□□□ 0.31
PSEN2-201ENST00000366782 DCCP43146 1447 aa17■□□□□ 0.31
PSEN2-201ENST00000366782 PCDH11XQ9BZA7 1347 aa17■□□□□ 0.31
PSEN2-201ENST00000366782 PCDH11YQ9BZA8 1340 aa17■□□□□ 0.31
PSEN2-201ENST00000366782 GUCY1B3Q02153 619 aa17■□□□□ 0.31
PSEN2-201ENST00000366782 NAA16Q6N069 864 aaPredicted RBP17■□□□□ 0.31
PSEN2-201ENST00000366782 TOM1L2Q6ZVM7 507 aa17■□□□□ 0.31
PSEN2-201ENST00000366782 TDRD7Q8NHU6 1098 aaKnown RBP17■□□□□ 0.31
PSEN2-201ENST00000366782 RCOR1Q9UKL0 485 aa17■□□□□ 0.31
PSEN2-201ENST00000366782 ERVV-2B6SEH9 535 aa16.99■□□□□ 0.31
PSEN2-201ENST00000366782 ZSCAN20P17040 1043 aaPredicted RBP16.99■□□□□ 0.31
PSEN2-201ENST00000366782 FKBP4Q02790 459 aaKnown RBP eCLIP16.99■□□□□ 0.31
PSEN2-201ENST00000366782 CADPS2Q86UW7 1296 aa16.99■□□□□ 0.31
PSEN2-201ENST00000366782 PLA2G4DQ86XP0 818 aa16.99■□□□□ 0.31
PSEN2-201ENST00000366782 CCDC85AQ96PX6 553 aaPredicted RBP16.99■□□□□ 0.31
PSEN2-201ENST00000366782 NWD2Q9ULI1 1742 aa16.99■□□□□ 0.31
PSEN2-201ENST00000366782 WDR17Q8IZU2 1322 aa16.99■□□□□ 0.31
PSEN2-201ENST00000366782 FAM177BA6PVY3 158 aa16.99■□□□□ 0.31
PSEN2-201ENST00000366782 CIAO1O76071 339 aa16.99■□□□□ 0.31
PSEN2-201ENST00000366782 FDPSP14324 419 aaKnown RBP16.99■□□□□ 0.31
PSEN2-201ENST00000366782 ZNF165P49910 485 aa16.99■□□□□ 0.31
PSEN2-201ENST00000366782 DMTNQ08495 405 aa16.99■□□□□ 0.31
PSEN2-201ENST00000366782 LRMPQ12912 555 aa16.99■□□□□ 0.31
PSEN2-201ENST00000366782 SNW1Q13573 536 aaKnown RBP16.99■□□□□ 0.31
PSEN2-201ENST00000366782 SCARF1Q14162 830 aa16.99■□□□□ 0.31
PSEN2-201ENST00000366782 CCDC186Q7Z3E2 898 aa16.99■□□□□ 0.31
PSEN2-201ENST00000366782 PRIMPOLQ96LW4 560 aa16.99■□□□□ 0.31
PSEN2-201ENST00000366782 A0A087WWV3 80 aa16.98■□□□□ 0.31
PSEN2-201ENST00000366782 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.98■□□□□ 0.31
PSEN2-201ENST00000366782 NAP1L2Q9ULW6 460 aaPredicted RBP16.98■□□□□ 0.31
PSEN2-201ENST00000366782 PAPPAQ13219 1627 aa16.98■□□□□ 0.31
PSEN2-201ENST00000366782 ZNF75DP51815 510 aa16.98■□□□□ 0.31
PSEN2-201ENST00000366782 NKX1-1Q15270 411 aaPredicted RBP16.98■□□□□ 0.31
PSEN2-201ENST00000366782 CCAR1Q8IX12 1150 aaKnown RBP16.98■□□□□ 0.31
PSEN2-201ENST00000366782 ISCA1Q9BUE6 129 aa16.98■□□□□ 0.31
PSEN2-201ENST00000366782 ATG3Q9NT62 314 aa16.98■□□□□ 0.31
PSEN2-201ENST00000366782 PODXL2Q9NZ53 605 aa16.98■□□□□ 0.31
PSEN2-201ENST00000366782 HMGN5P82970 282 aaKnown RBP16.97■□□□□ 0.31
PSEN2-201ENST00000366782 C11orf57Q6ZUT1 292 aaPredicted RBP16.97■□□□□ 0.31
PSEN2-201ENST00000366782 TPM3P06753 285 aa16.97■□□□□ 0.31
PSEN2-201ENST00000366782 HAND2P61296 217 aa16.97■□□□□ 0.31
PSEN2-201ENST00000366782 IQCB1Q15051 598 aa16.97■□□□□ 0.31
PSEN2-201ENST00000366782 HSP90AB3PQ58FF7 597 aa16.97■□□□□ 0.31
PSEN2-201ENST00000366782 ZNF274Q96GC6 653 aaPredicted RBP16.97■□□□□ 0.31
PSEN2-201ENST00000366782 XAGE2Q96GT9 111 aa16.97■□□□□ 0.31
PSEN2-201ENST00000366782 TRIM5Q9C035 493 aa16.97■□□□□ 0.31
PSEN2-201ENST00000366782 PRDM11Q9NQV5 511 aa16.97■□□□□ 0.31
PSEN2-201ENST00000366782 GOLGA6L6A8MZA4 724 aa16.96■□□□□ 0.31
PSEN2-201ENST00000366782 GTF2F1P35269 517 aaKnown RBP eCLIP16.96■□□□□ 0.31
PSEN2-201ENST00000366782 PI16Q6UXB8 463 aa16.96■□□□□ 0.31
PSEN2-201ENST00000366782 CEP126Q9P2H0 1117 aa16.96■□□□□ 0.31
PSEN2-201ENST00000366782 SHANK3Q9BYB0 1731 aa16.96■□□□□ 0.31
PSEN2-201ENST00000366782 UTP14CQ5TAP6 766 aaKnown RBP16.96■□□□□ 0.31
PSEN2-201ENST00000366782 OTUD7BQ6GQQ9 843 aa16.96■□□□□ 0.31
PSEN2-201ENST00000366782 BRINP3Q76B58 766 aa16.96■□□□□ 0.31
PSEN2-201ENST00000366782 SYNE4Q8N205 404 aa16.96■□□□□ 0.31
PSEN2-201ENST00000366782 ENGASEQ8NFI3 743 aa16.96■□□□□ 0.31
PSEN2-201ENST00000366782 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.96■□□□□ 0.31
PSEN2-201ENST00000366782 FAM89AQ96GI7 184 aa16.96■□□□□ 0.31
PSEN2-201ENST00000366782 ZNF330Q9Y3S2 320 aaPredicted RBP16.96■□□□□ 0.31
PSEN2-201ENST00000366782 CARMIL3Q8ND23 1372 aa16.96■□□□□ 0.31
PSEN2-201ENST00000366782 TCIRG1Q13488 830 aa16.95■□□□□ 0.3
PSEN2-201ENST00000366782 TNS2Q63HR2 1409 aa16.95■□□□□ 0.3
PSEN2-201ENST00000366782 SPEF2Q9C093 1822 aa16.95■□□□□ 0.3
PSEN2-201ENST00000366782 CCDC57Q2TAC2 916 aa16.95■□□□□ 0.3
PSEN2-201ENST00000366782 CCDC144BQ3MJ40 725 aa16.95■□□□□ 0.3
PSEN2-201ENST00000366782 TICAM2Q86XR7 235 aa16.95■□□□□ 0.3
PSEN2-201ENST00000366782 CCDC144CPQ8IYA2 1237 aa16.95■□□□□ 0.3
PSEN2-201ENST00000366782 ERCC4Q92889 916 aaPredicted RBP16.95■□□□□ 0.3
PSEN2-201ENST00000366782 PUS7LQ9H0K6 701 aaKnown RBP16.95■□□□□ 0.3
PSEN2-201ENST00000366782 COL5A2P05997 1499 aaPredicted RBP16.95■□□□□ 0.3
PSEN2-201ENST00000366782 FGAP02671 866 aa16.94■□□□□ 0.3
PSEN2-201ENST00000366782 ZAP70P43403 619 aa16.94■□□□□ 0.3
PSEN2-201ENST00000366782 EVCP57679 992 aa16.94■□□□□ 0.3
PSEN2-201ENST00000366782 TTC39AQ5SRH9 613 aa16.94■□□□□ 0.3
PSEN2-201ENST00000366782 RAB11FIP4Q86YS3 637 aa16.94■□□□□ 0.3
PSEN2-201ENST00000366782 DRC7Q8IY82 874 aa16.94■□□□□ 0.3
PSEN2-201ENST00000366782 NKX2-3Q8TAU0 364 aa16.94■□□□□ 0.3
PSEN2-201ENST00000366782 IL2RBP14784 551 aa16.93■□□□□ 0.3
PSEN2-201ENST00000366782 ATP2B3Q16720 1220 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms