RNA–Protein interactions for RNA: ENST00000361332.8

CTNND1-202, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-202ENST00000361332 PARD3BQ8TEW8 1205 aa9.41□□□□□ -0.9
CTNND1-202ENST00000361332 NBPF4Q96M43 638 aa9.41□□□□□ -0.9
CTNND1-202ENST00000361332 RAB3IPQ96QF0 476 aaPredicted RBP9.41□□□□□ -0.9
CTNND1-202ENST00000361332 TRIM6Q9C030 488 aaPredicted RBP9.41□□□□□ -0.9
CTNND1-202ENST00000361332 EXOC1Q9NV70 894 aa9.41□□□□□ -0.9
CTNND1-202ENST00000361332 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.41□□□□□ -0.94e-9■□□□□ 9.9
CTNND1-202ENST00000361332 GSTO1P78417 241 aa9.41□□□□□ -0.9
CTNND1-202ENST00000361332 C4orf50Q6ZRC1 276 aa9.41□□□□□ -0.9
CTNND1-202ENST00000361332 VPS52Q8N1B4 723 aa9.41□□□□□ -0.9
CTNND1-202ENST00000361332 SPAG5Q96R06 1193 aa9.41□□□□□ -0.9
CTNND1-202ENST00000361332 PLEKHH2Q8IVE3 1493 aa9.41□□□□□ -0.9
CTNND1-202ENST00000361332 UBA7P41226 1012 aa9.41□□□□□ -0.9
CTNND1-202ENST00000361332 TSTA3Q13630 321 aaPredicted RBP9.41□□□□□ -0.9
CTNND1-202ENST00000361332 NSMCE1Q8WV22 266 aa9.41□□□□□ -0.9
CTNND1-202ENST00000361332 RPGRIP1LQ68CZ1 1315 aa9.41□□□□□ -0.9
CTNND1-202ENST00000361332 ISM2Q6H9L7 571 aa9.41□□□□□ -0.9
CTNND1-202ENST00000361332 CEP120Q8N960 986 aa9.41□□□□□ -0.9
CTNND1-202ENST00000361332 TRIM7Q9C029 511 aa9.41□□□□□ -0.9
CTNND1-202ENST00000361332 GRIN2BQ13224 1484 aa9.41□□□□□ -0.9
CTNND1-202ENST00000361332 TSPY3P0CV98 308 aa9.41□□□□□ -0.9
CTNND1-202ENST00000361332 TSPY8P0CW00 308 aa9.41□□□□□ -0.9
CTNND1-202ENST00000361332 ATP2A2P16615 1042 aaKnown RBP9.41□□□□□ -0.9
CTNND1-202ENST00000361332 DNAJC21Q5F1R6 531 aaKnown RBP9.41□□□□□ -0.9
CTNND1-202ENST00000361332 STIM2Q9P246 746 aa9.41□□□□□ -0.9
CTNND1-202ENST00000361332 STX8Q9UNK0 236 aa9.41□□□□□ -0.9
CTNND1-202ENST00000361332 CDK13Q14004 1512 aaKnown RBP9.4□□□□□ -0.9
CTNND1-202ENST00000361332 RPAP2Q8IXW5 612 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-202ENST00000361332 CDC5LQ99459 802 aaKnown RBP9.4□□□□□ -0.9
CTNND1-202ENST00000361332 RBM28Q9NW13 759 aaKnown RBP9.4□□□□□ -0.9
CTNND1-202ENST00000361332 LIMCH1Q9UPQ0 1083 aa9.4□□□□□ -0.9
CTNND1-202ENST00000361332 M0QZ92 97 aa9.4□□□□□ -0.9
CTNND1-202ENST00000361332 KIF22Q14807 665 aa9.4□□□□□ -0.9
CTNND1-202ENST00000361332 UAP1Q16222 522 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-202ENST00000361332 ACBD5Q5T8D3 534 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-202ENST00000361332 PRKAG2Q9UGJ0 569 aa9.4□□□□□ -0.9
CTNND1-202ENST00000361332 RARSP54136 660 aaKnown RBP9.4□□□□□ -0.9
CTNND1-202ENST00000361332 PPFIA1Q13136 1202 aa9.4□□□□□ -0.9
CTNND1-202ENST00000361332 TMEM57Q8N5G2 664 aa9.4□□□□□ -0.9
CTNND1-202ENST00000361332 PPFIBP2Q8ND30 876 aa9.4□□□□□ -0.9
CTNND1-202ENST00000361332 EPRSP07814 1512 aaKnown RBP9.4□□□□□ -0.9
CTNND1-202ENST00000361332 NKTRP30414 1462 aaKnown RBP9.4□□□□□ -0.9
CTNND1-202ENST00000361332 PTPN23Q9H3S7 1636 aa9.4□□□□□ -0.9
CTNND1-202ENST00000361332 HSPA1LP34931 641 aa9.4□□□□□ -0.91
CTNND1-202ENST00000361332 PLCB4Q15147 1175 aa9.4□□□□□ -0.91
CTNND1-202ENST00000361332 EAPPQ56P03 285 aaPredicted RBP9.4□□□□□ -0.91
CTNND1-202ENST00000361332 DUSP27Q5VZP5 1158 aa9.4□□□□□ -0.91
CTNND1-202ENST00000361332 C6orf50Q9HD87 102 aa9.4□□□□□ -0.91
CTNND1-202ENST00000361332 PARP3Q9Y6F1 533 aa9.4□□□□□ -0.91
CTNND1-202ENST00000361332 ABL1P00519 1130 aa9.4□□□□□ -0.91
CTNND1-202ENST00000361332 UBASH3AP57075 661 aa9.4□□□□□ -0.91
CTNND1-202ENST00000361332 TRAF1Q13077 416 aa9.4□□□□□ -0.91
CTNND1-202ENST00000361332 ZBTB33Q86T24 672 aa9.4□□□□□ -0.91
CTNND1-202ENST00000361332 CDK19Q9BWU1 502 aa9.4□□□□□ -0.91
CTNND1-202ENST00000361332 POLA1P09884 1462 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-202ENST00000361332 ALDH3A1P30838 453 aa9.39□□□□□ -0.91
CTNND1-202ENST00000361332 ZNF569Q5MCW4 686 aa9.39□□□□□ -0.91
CTNND1-202ENST00000361332 CCDC110Q8TBZ0 833 aa9.39□□□□□ -0.91
CTNND1-202ENST00000361332 SELENOSQ9BQE4 189 aa9.39□□□□□ -0.91
CTNND1-202ENST00000361332 LRPPRCP42704 1394 aaKnown RBP9.39□□□□□ -0.91
CTNND1-202ENST00000361332 LACTBP83111 547 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-202ENST00000361332 CCDC129Q6ZRS4 1044 aa9.39□□□□□ -0.91
CTNND1-202ENST00000361332 TTC30AQ86WT1 665 aa9.39□□□□□ -0.91
CTNND1-202ENST00000361332 WHAMMQ8TF30 809 aa9.39□□□□□ -0.91
CTNND1-202ENST00000361332 TTC14Q96N46 770 aa9.39□□□□□ -0.91
CTNND1-202ENST00000361332 FAM204AQ9H8W3 233 aa9.39□□□□□ -0.91
CTNND1-202ENST00000361332 TTLL3Q9Y4R7 772 aa9.39□□□□□ -0.91
CTNND1-202ENST00000361332 TUBB4AP04350 444 aa9.39□□□□□ -0.91
CTNND1-202ENST00000361332 PKD2L1Q9P0L9 805 aa9.39□□□□□ -0.91
CTNND1-202ENST00000361332 SMIM23A6NLE4 172 aa9.39□□□□□ -0.91
CTNND1-202ENST00000361332 PCK1P35558 622 aa9.39□□□□□ -0.91
CTNND1-202ENST00000361332 TRIM47Q96LD4 638 aa9.39□□□□□ -0.91
CTNND1-202ENST00000361332 BOLA2Q9H3K6 86 aa9.39□□□□□ -0.91
CTNND1-202ENST00000361332 RPRD2Q5VT52 1461 aaKnown RBP9.39□□□□□ -0.91
CTNND1-202ENST00000361332 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-202ENST00000361332 GJB2P29033 226 aa9.39□□□□□ -0.91
CTNND1-202ENST00000361332 FAM76AQ8TAV0 307 aa9.39□□□□□ -0.91
CTNND1-202ENST00000361332 LARP6Q9BRS8 491 aaKnown RBP9.39□□□□□ -0.91
CTNND1-202ENST00000361332 PPANQ9NQ55 473 aaKnown RBP9.39□□□□□ -0.91
CTNND1-202ENST00000361332 SPDYE2BA6NHP3 402 aa9.38□□□□□ -0.91
CTNND1-202ENST00000361332 SPDYE6P0CI01 402 aa9.38□□□□□ -0.91
CTNND1-202ENST00000361332 TCIRG1Q13488 830 aa9.38□□□□□ -0.91
CTNND1-202ENST00000361332 PRKG1Q13976 671 aa9.38□□□□□ -0.91
CTNND1-202ENST00000361332 HS1BP3Q53T59 392 aa9.38□□□□□ -0.91
CTNND1-202ENST00000361332 LMNTD2Q8IXW0 634 aa9.38□□□□□ -0.91
CTNND1-202ENST00000361332 TMOD4Q9NZQ9 345 aa9.38□□□□□ -0.91
CTNND1-202ENST00000361332 LUC7L2Q9Y383 392 aaKnown RBP9.38□□□□□ -0.91
CTNND1-202ENST00000361332 UBAP1LF5GYI3 381 aa9.38□□□□□ -0.91
CTNND1-202ENST00000361332 U2AF2P26368 475 aaKnown RBP eCLIP9.38□□□□□ -0.911e-10■■□□□ 14
CTNND1-202ENST00000361332 PRAM1Q96QH2 718 aa9.38□□□□□ -0.91
CTNND1-202ENST00000361332 PPP1R12CQ9BZL4 782 aa9.38□□□□□ -0.91
CTNND1-202ENST00000361332 STMN4Q9H169 189 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-202ENST00000361332 TFCP2L1Q9NZI6 479 aa9.38□□□□□ -0.91
CTNND1-202ENST00000361332 FNDC3AQ9Y2H6 1198 aaKnown RBP9.38□□□□□ -0.91
CTNND1-202ENST00000361332 TOPBP1Q92547 1522 aa9.38□□□□□ -0.91
CTNND1-202ENST00000361332 CTAGE9A4FU28 777 aa9.38□□□□□ -0.91
CTNND1-202ENST00000361332 AKR1B10O60218 316 aa9.38□□□□□ -0.91
CTNND1-202ENST00000361332 RAB11FIP3O75154 756 aa9.38□□□□□ -0.91
CTNND1-202ENST00000361332 INF2Q27J81 1249 aa9.38□□□□□ -0.91
CTNND1-202ENST00000361332 ANO6Q4KMQ2 910 aa9.38□□□□□ -0.91
CTNND1-202ENST00000361332 CCDC125Q86Z20 511 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms