RNA–Protein interactions for RNA: ENST00000360428.8

DSC3-201, Transcript of desmocollin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSC3, Length 6,939 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-201ENST00000360428 CALM3P0DP25 149 aa6.68□□□□□ -1.34
DSC3-201ENST00000360428 NAA25Q14CX7 972 aa6.68□□□□□ -1.34
DSC3-201ENST00000360428 CCDC186Q7Z3E2 898 aa6.68□□□□□ -1.34
DSC3-201ENST00000360428 VPS52Q8N1B4 723 aa6.68□□□□□ -1.34
DSC3-201ENST00000360428 ZGPATQ8N5A5 531 aaKnown RBP6.68□□□□□ -1.34
DSC3-201ENST00000360428 CRNKL1Q9BZJ0 848 aaKnown RBP6.68□□□□□ -1.34
DSC3-201ENST00000360428 ZNF644Q9H582 1327 aaPredicted RBP6.68□□□□□ -1.34
DSC3-201ENST00000360428 TSPY2A6NKD2 308 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 SARNPP82979 210 aaKnown RBP6.67□□□□□ -1.34
DSC3-201ENST00000360428 FAM69CQ0P6D2 419 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 WTAPQ15007 396 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 SEL1L2Q5TEA6 688 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 PHLDB2Q86SQ0 1253 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 CDC5LQ99459 802 aaKnown RBP6.67□□□□□ -1.34
DSC3-201ENST00000360428 NAP1L4Q99733 375 aaKnown RBP6.67□□□□□ -1.34
DSC3-201ENST00000360428 FAM169AQ9Y6X4 670 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 RTL1A6NKG5 1358 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 PIK3R4Q99570 1358 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 SSH1Q8WYL5 1049 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 CCDC42Q96M95 316 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 PHF23Q9BUL5 403 aaPredicted RBP6.67□□□□□ -1.34
DSC3-201ENST00000360428 RTL9Q8NET4 1388 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 CAMSAP2Q08AD1 1489 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 ARL1P40616 181 aaPredicted RBP6.67□□□□□ -1.34
DSC3-201ENST00000360428 ARHGAP25P42331 645 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 NEDD9Q14511 834 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 VWA3BQ502W6 1294 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 CEP85LQ5SZL2 805 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 CNGA4Q8IV77 575 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 ERO1AQ96HE7 468 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 FAM135AQ9P2D6 1515 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 CALML3P27482 149 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 CALCOCO2Q13137 446 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 PPP1R7Q15435 360 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 USP48Q86UV5 1035 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 AOPEPQ8N6M6 819 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 RPGRQ92834 1020 aaKnown RBP6.67□□□□□ -1.34
DSC3-201ENST00000360428 CCDC8Q9H0W5 538 aaPredicted RBP6.67□□□□□ -1.34
DSC3-201ENST00000360428 KCNK9Q9NPC2 374 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 BCAP29Q9UHQ4 241 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 SAMM50Q9Y512 469 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 AQRO60306 1485 aaKnown RBP eCLIP6.67□□□□□ -1.34
DSC3-201ENST00000360428 ZBTB43O43298 467 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 IRX4P78413 519 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 PSMD1Q99460 953 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 ALG1Q9BT22 464 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 PLCB1Q9NQ66 1216 aa6.67□□□□□ -1.34
DSC3-201ENST00000360428 FAM13AO94988 1023 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 HDAC1Q13547 482 aaPredicted RBP6.66□□□□□ -1.34
DSC3-201ENST00000360428 CCT6BQ92526 530 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 TMX3Q96JJ7 454 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.66□□□□□ -1.34
DSC3-201ENST00000360428 NUCB1Q02818 461 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 NBPF8Q3BBV2 869 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 TAOK1Q7L7X3 1001 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 MAK16Q9BXY0 300 aaKnown RBP6.66□□□□□ -1.34
DSC3-201ENST00000360428 RABGAP1Q9Y3P9 1069 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 MRVI1Q9Y6F6 885 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 TTC21BQ7Z4L5 1316 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 B4DLN1 442 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 MRPL12P52815 198 aaKnown RBP6.66□□□□□ -1.34
DSC3-201ENST00000360428 RTN1Q16799 776 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 RAB3IPQ96QF0 476 aaPredicted RBP6.66□□□□□ -1.34
DSC3-201ENST00000360428 ZEB2O60315 1214 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 ZNF853P0CG23 659 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 ZNF569Q5MCW4 686 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 IFIT1BQ5T764 474 aaKnown RBP6.66□□□□□ -1.34
DSC3-201ENST00000360428 ISM2Q6H9L7 571 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 KRBA2Q6ZNG9 492 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 F13A1P00488 732 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 PCK1P35558 622 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 CCDC82Q8N4S0 544 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 GDPD2Q9HCC8 539 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 POGZQ7Z3K3 1410 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 ACTN4O43707 911 aaKnown RBP6.66□□□□□ -1.34
DSC3-201ENST00000360428 BUB1BO60566 1050 aaPredicted RBP6.66□□□□□ -1.34
DSC3-201ENST00000360428 EEF2P13639 858 aaKnown RBP6.66□□□□□ -1.34
DSC3-201ENST00000360428 UBXN1Q04323 297 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 GABPB1Q06547 395 aaPredicted RBP6.66□□□□□ -1.34
DSC3-201ENST00000360428 NCBP1Q09161 790 aaKnown RBP6.66□□□□□ -1.34
DSC3-201ENST00000360428 RRS1Q15050 365 aaKnown RBP6.66□□□□□ -1.34
DSC3-201ENST00000360428 BRAPQ7Z569 592 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 UBLCP1Q8WVY7 318 aaPredicted RBP6.66□□□□□ -1.34
DSC3-201ENST00000360428 ESR2Q92731 530 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 ZFP91Q96JP5 570 aaPredicted RBP6.66□□□□□ -1.34
DSC3-201ENST00000360428 MMRN2Q9H8L6 949 aa6.66□□□□□ -1.34
DSC3-201ENST00000360428 TYRO3Q06418 890 aa6.65□□□□□ -1.34
DSC3-201ENST00000360428 ZNF354CQ86Y25 554 aa6.65□□□□□ -1.34
DSC3-201ENST00000360428 ARHGAP45Q92619 1136 aa6.65□□□□□ -1.34
DSC3-201ENST00000360428 KIFAP3Q92845 792 aa6.65□□□□□ -1.34
DSC3-201ENST00000360428 STK24Q9Y6E0 443 aa6.65□□□□□ -1.34
DSC3-201ENST00000360428 LAMC3Q9Y6N6 1575 aa6.65□□□□□ -1.34
DSC3-201ENST00000360428 EPRSP07814 1512 aaKnown RBP6.65□□□□□ -1.34
DSC3-201ENST00000360428 AFMP43652 599 aa6.65□□□□□ -1.34
DSC3-201ENST00000360428 RUFY4Q6ZNE9 571 aa6.65□□□□□ -1.34
DSC3-201ENST00000360428 NUF2Q9BZD4 464 aa6.65□□□□□ -1.34
DSC3-201ENST00000360428 PRDM11Q9NQV5 511 aa6.65□□□□□ -1.34
DSC3-201ENST00000360428 CNPY2Q9Y2B0 182 aa6.65□□□□□ -1.34
DSC3-201ENST00000360428 UTP11Q9Y3A2 253 aaKnown RBP6.65□□□□□ -1.34
DSC3-201ENST00000360428 KRT2P35908 639 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms