RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ANP32AP39687 249 aaKnown RBP16.86■□□□□ 0.29
PDLIM5-203ENST00000359265 DBNDD2Q9BQY9 259 aa16.86■□□□□ 0.29
PDLIM5-203ENST00000359265 SEC31BQ9NQW1 1179 aa16.86■□□□□ 0.29
PDLIM5-203ENST00000359265 MKRN1Q9UHC7 482 aaKnown RBP16.86■□□□□ 0.29
PDLIM5-203ENST00000359265 COL4A1P02462 1669 aa16.85■□□□□ 0.29
PDLIM5-203ENST00000359265 A0A1B0GUL7 405 aa16.85■□□□□ 0.29
PDLIM5-203ENST00000359265 MFAP1P55081 439 aaKnown RBP16.85■□□□□ 0.29
PDLIM5-203ENST00000359265 MLLT1Q03111 559 aaPredicted RBP16.85■□□□□ 0.29
PDLIM5-203ENST00000359265 C3orf67Q6ZVT6 689 aa16.85■□□□□ 0.29
PDLIM5-203ENST00000359265 ANKRD18AQ8IVF6 992 aa16.85■□□□□ 0.29
PDLIM5-203ENST00000359265 NEUROD6Q96NK8 337 aa16.85■□□□□ 0.29
PDLIM5-203ENST00000359265 ATP5JP18859 108 aa16.84■□□□□ 0.29
PDLIM5-203ENST00000359265 ATP2B3Q16720 1220 aa16.84■□□□□ 0.29
PDLIM5-203ENST00000359265 VGLL2Q8N8G2 317 aa16.84■□□□□ 0.29
PDLIM5-203ENST00000359265 ARFGEF1Q9Y6D6 1849 aa16.84■□□□□ 0.29
PDLIM5-203ENST00000359265 MYH13Q9UKX3 1938 aa16.84■□□□□ 0.29
PDLIM5-203ENST00000359265 RGS19P49795 217 aa16.83■□□□□ 0.28
PDLIM5-203ENST00000359265 DDX46Q7L014 1031 aaKnown RBP16.83■□□□□ 0.28
PDLIM5-203ENST00000359265 CCDC24Q8N4L8 307 aa16.83■□□□□ 0.28
PDLIM5-203ENST00000359265 RPGRQ92834 1020 aaKnown RBP16.83■□□□□ 0.28
PDLIM5-203ENST00000359265 EVI5LQ96CN4 794 aa16.83■□□□□ 0.28
PDLIM5-203ENST00000359265 BRIP1Q9BX63 1249 aa16.83■□□□□ 0.28
PDLIM5-203ENST00000359265 AKAP11Q9UKA4 1901 aa16.82■□□□□ 0.28
PDLIM5-203ENST00000359265 PDE8BO95263 885 aa16.82■□□□□ 0.28
PDLIM5-203ENST00000359265 MAP4K4O95819 1239 aaPredicted RBP16.82■□□□□ 0.28
PDLIM5-203ENST00000359265 PDE6BP35913 854 aa16.82■□□□□ 0.28
PDLIM5-203ENST00000359265 TIMM10P62072 90 aa16.82■□□□□ 0.28
PDLIM5-203ENST00000359265 PUM3Q15397 648 aaKnown RBP16.82■□□□□ 0.28
PDLIM5-203ENST00000359265 GORABQ5T7V8 394 aa16.82■□□□□ 0.28
PDLIM5-203ENST00000359265 CTCFP49711 727 aaPredicted RBP16.81■□□□□ 0.28
PDLIM5-203ENST00000359265 LBX1P52954 281 aa16.81■□□□□ 0.28
PDLIM5-203ENST00000359265 CRY2Q49AN0 593 aa16.81■□□□□ 0.28
PDLIM5-203ENST00000359265 CCDC158Q5M9N0 1113 aa16.81■□□□□ 0.28
PDLIM5-203ENST00000359265 XAGE2Q96GT9 111 aa16.81■□□□□ 0.28
PDLIM5-203ENST00000359265 BOLA2Q9H3K6 86 aa16.81■□□□□ 0.28
PDLIM5-203ENST00000359265 CACNA1SQ13698 1873 aa16.8■□□□□ 0.28
PDLIM5-203ENST00000359265 RFX7Q2KHR2 1363 aa16.8■□□□□ 0.28
PDLIM5-203ENST00000359265 COL11A2P13942 1736 aaPredicted RBP16.8■□□□□ 0.28
PDLIM5-203ENST00000359265 KLRG2A4D1S0 409 aaPredicted RBP16.8■□□□□ 0.28
PDLIM5-203ENST00000359265 POTECB2RU33 542 aa16.8■□□□□ 0.28
PDLIM5-203ENST00000359265 REC8O95072 547 aa16.8■□□□□ 0.28
PDLIM5-203ENST00000359265 SLC5A1P13866 664 aa16.8■□□□□ 0.28
PDLIM5-203ENST00000359265 VEGFAP15692 232 aaPredicted RBP16.8■□□□□ 0.28
PDLIM5-203ENST00000359265 CHMLP26374 656 aa16.8■□□□□ 0.28
PDLIM5-203ENST00000359265 TTC39AQ5SRH9 613 aa16.8■□□□□ 0.28
PDLIM5-203ENST00000359265 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.8■□□□□ 0.28
PDLIM5-203ENST00000359265 RBM17Q96I25 401 aaKnown RBP16.8■□□□□ 0.28
PDLIM5-203ENST00000359265 TBC1D32Q96NH3 1257 aa16.8■□□□□ 0.28
PDLIM5-203ENST00000359265 HAUS7Q99871 368 aa16.8■□□□□ 0.28
PDLIM5-203ENST00000359265 BSDC1Q9NW68 430 aaPredicted RBP16.8■□□□□ 0.28
PDLIM5-203ENST00000359265 LRRC37AA6NMS7 1700 aa16.79■□□□□ 0.28
PDLIM5-203ENST00000359265 HIP1O00291 1037 aa16.79■□□□□ 0.28
PDLIM5-203ENST00000359265 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
PDLIM5-203ENST00000359265 RPS8P62241 208 aaKnown RBP16.79■□□□□ 0.28
PDLIM5-203ENST00000359265 LPIN2Q92539 896 aa16.79■□□□□ 0.28
PDLIM5-203ENST00000359265 C22orf23Q9BZE7 217 aa16.79■□□□□ 0.28
PDLIM5-203ENST00000359265 DOCK2Q92608 1830 aa16.78■□□□□ 0.28
PDLIM5-203ENST00000359265 IFIT1P09914 478 aaKnown RBP16.78■□□□□ 0.28
PDLIM5-203ENST00000359265 FGFR2P21802 821 aa16.78■□□□□ 0.28
PDLIM5-203ENST00000359265 ADORA1P30542 326 aa16.78■□□□□ 0.28
PDLIM5-203ENST00000359265 CHRNDQ07001 517 aa16.78■□□□□ 0.28
PDLIM5-203ENST00000359265 GRAPQ13588 217 aa16.78■□□□□ 0.28
PDLIM5-203ENST00000359265 GRAPLQ8TC17 118 aaPredicted RBP16.78■□□□□ 0.28
PDLIM5-203ENST00000359265 CELF1Q92879 486 aaKnown RBP16.78■□□□□ 0.28
PDLIM5-203ENST00000359265 ESYT1Q9BSJ8 1104 aa16.78■□□□□ 0.28
PDLIM5-203ENST00000359265 FSD1Q9BTV5 496 aa16.78■□□□□ 0.28
PDLIM5-203ENST00000359265 DIAPH3Q9NSV4 1193 aa16.78■□□□□ 0.28
PDLIM5-203ENST00000359265 DLEC1Q9Y238 1755 aa16.77■□□□□ 0.28
PDLIM5-203ENST00000359265 NPR1P16066 1061 aa16.77■□□□□ 0.28
PDLIM5-203ENST00000359265 HOXA10P31260 410 aaPredicted RBP16.77■□□□□ 0.28
PDLIM5-203ENST00000359265 HELBQ8NG08 1087 aaPredicted RBP16.77■□□□□ 0.28
PDLIM5-203ENST00000359265 RUFY2Q8WXA3 655 aa16.77■□□□□ 0.28
PDLIM5-203ENST00000359265 CRAMP1Q96RY5 1269 aa16.77■□□□□ 0.28
PDLIM5-203ENST00000359265 DNAJC2Q99543 621 aaKnown RBP16.77■□□□□ 0.28
PDLIM5-203ENST00000359265 CREBZFQ9NS37 354 aa16.77■□□□□ 0.28
PDLIM5-203ENST00000359265 MYO5AQ9Y4I1 1855 aaKnown RBP16.76■□□□□ 0.27
PDLIM5-203ENST00000359265 GLTPD2A6NH11 291 aa16.76■□□□□ 0.27
PDLIM5-203ENST00000359265 CCDC85CA6NKD9 419 aa16.76■□□□□ 0.27
PDLIM5-203ENST00000359265 TMC4Q7Z404 712 aa16.76■□□□□ 0.27
PDLIM5-203ENST00000359265 DDRGK1Q96HY6 314 aa16.76■□□□□ 0.27
PDLIM5-203ENST00000359265 PIM2Q9P1W9 311 aa16.76■□□□□ 0.27
PDLIM5-203ENST00000359265 H0YIN7 160 aa16.75■□□□□ 0.27
PDLIM5-203ENST00000359265 UQCRFS1P1P0C7P4 283 aa16.75■□□□□ 0.27
PDLIM5-203ENST00000359265 SRGNP10124 158 aa16.75■□□□□ 0.27
PDLIM5-203ENST00000359265 ALDH1B1P30837 517 aa16.75■□□□□ 0.27
PDLIM5-203ENST00000359265 TICAM2Q86XR7 235 aa16.75■□□□□ 0.27
PDLIM5-203ENST00000359265 MASTLQ96GX5 879 aa16.75■□□□□ 0.27
PDLIM5-203ENST00000359265 ZNF512BQ96KM6 892 aaPredicted RBP16.75■□□□□ 0.27
PDLIM5-203ENST00000359265 ANKRD2Q9GZV1 360 aa16.75■□□□□ 0.27
PDLIM5-203ENST00000359265 PAG1Q9NWQ8 432 aa16.75■□□□□ 0.27
PDLIM5-203ENST00000359265 MINPP1Q9UNW1 487 aa16.75■□□□□ 0.27
PDLIM5-203ENST00000359265 RAD50Q92878 1312 aa16.74■□□□□ 0.27
PDLIM5-203ENST00000359265 TAF5LO75529 589 aa16.74■□□□□ 0.27
PDLIM5-203ENST00000359265 BBOX1O75936 387 aa16.74■□□□□ 0.27
PDLIM5-203ENST00000359265 RBM25P49756 843 aaKnown RBP16.74■□□□□ 0.27
PDLIM5-203ENST00000359265 RASSF7Q02833 373 aa16.74■□□□□ 0.27
PDLIM5-203ENST00000359265 UBE4AQ14139 1066 aa16.74■□□□□ 0.27
PDLIM5-203ENST00000359265 WBP1LQ9NX94 342 aa16.74■□□□□ 0.27
PDLIM5-203ENST00000359265 CNTNAP1P78357 1384 aa16.74■□□□□ 0.27
PDLIM5-203ENST00000359265 EPB41L2O43491 1005 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms