RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 ARHGAP6O43182 974 aa15.35■□□□□ 0.05
SPTSSB-201ENST00000359175 CREB3L3Q68CJ9 461 aa15.35■□□□□ 0.05
SPTSSB-201ENST00000359175 KCNV1Q6PIU1 500 aa15.35■□□□□ 0.05
SPTSSB-201ENST00000359175 SGSM3Q96HU1 749 aa15.35■□□□□ 0.05
SPTSSB-201ENST00000359175 BICC1Q9H694 974 aaKnown RBP15.35■□□□□ 0.05
SPTSSB-201ENST00000359175 USP42Q9H9J4 1324 aaKnown RBP15.35■□□□□ 0.05
SPTSSB-201ENST00000359175 HNRNPH1P31943 449 aaKnown RBP15.35■□□□□ 0.05
SPTSSB-201ENST00000359175 MNAT1P51948 309 aa15.35■□□□□ 0.05
SPTSSB-201ENST00000359175 TUBB4BP68371 445 aa15.35■□□□□ 0.05
SPTSSB-201ENST00000359175 HSP90B2PQ58FF3 399 aa15.35■□□□□ 0.05
SPTSSB-201ENST00000359175 C21orf2O43822 256 aa15.34■□□□□ 0.05
SPTSSB-201ENST00000359175 RHPN1Q8TCX5 695 aa15.34■□□□□ 0.05
SPTSSB-201ENST00000359175 EMILIN1Q9Y6C2 1016 aa15.34■□□□□ 0.05
SPTSSB-201ENST00000359175 MAP3K5Q99683 1374 aa15.34■□□□□ 0.05
SPTSSB-201ENST00000359175 NCAPHQ15003 741 aa15.34■□□□□ 0.05
SPTSSB-201ENST00000359175 SRGAP1Q7Z6B7 1085 aa15.34■□□□□ 0.05
SPTSSB-201ENST00000359175 DDX54Q8TDD1 881 aaKnown RBP15.34■□□□□ 0.05
SPTSSB-201ENST00000359175 ITSN1Q15811 1721 aa15.34■□□□□ 0.05
SPTSSB-201ENST00000359175 ATP7BP35670 1465 aa15.34■□□□□ 0.05
SPTSSB-201ENST00000359175 XRN1Q8IZH2 1706 aaKnown RBP15.34■□□□□ 0.05
SPTSSB-201ENST00000359175 CHMP4BP1P59074 171 aa15.34■□□□□ 0.05
SPTSSB-201ENST00000359175 FANCCQ00597 558 aa15.34■□□□□ 0.05
SPTSSB-201ENST00000359175 TOB2Q14106 344 aaPredicted RBP15.34■□□□□ 0.05
SPTSSB-201ENST00000359175 DPCR1Q3MIW9 517 aa15.34■□□□□ 0.05
SPTSSB-201ENST00000359175 ATL3Q6DD88 541 aa15.34■□□□□ 0.05
SPTSSB-201ENST00000359175 RNF217Q8TC41 542 aa15.34■□□□□ 0.05
SPTSSB-201ENST00000359175 BRF1Q92994 677 aa15.34■□□□□ 0.05
SPTSSB-201ENST00000359175 DHX58Q96C10 678 aa15.34■□□□□ 0.05
SPTSSB-201ENST00000359175 A1CFQ9NQ94 594 aaKnown RBP15.34■□□□□ 0.05
SPTSSB-201ENST00000359175 LRCH2Q5VUJ6 765 aa15.33■□□□□ 0.05
SPTSSB-201ENST00000359175 TMEM139Q8IV31 216 aa15.33■□□□□ 0.05
SPTSSB-201ENST00000359175 FAM177A1Q8N128 213 aaPredicted RBP15.33■□□□□ 0.05
SPTSSB-201ENST00000359175 RBM8AQ9Y5S9 174 aaKnown RBP15.33■□□□□ 0.05
SPTSSB-201ENST00000359175 N4BP2Q86UW6 1770 aaPredicted RBP15.33■□□□□ 0.04
SPTSSB-201ENST00000359175 RPS6KB1P23443 525 aa15.33■□□□□ 0.04
SPTSSB-201ENST00000359175 BLOC1S2Q6QNY1 142 aa15.33■□□□□ 0.04
SPTSSB-201ENST00000359175 MAP4K1Q92918 833 aa15.33■□□□□ 0.04
SPTSSB-201ENST00000359175 KIAA1468Q9P260 1216 aa15.33■□□□□ 0.04
SPTSSB-201ENST00000359175 H3BQV1 296 aa15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 GOLIM4O00461 696 aa15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 MAP9Q49MG5 647 aa15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 IFFO2Q5TF58 517 aa15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 FMR1NBQ8N0W7 255 aaPredicted RBP15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 STAG1Q8WVM7 1258 aa15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 FAM204AQ9H8W3 233 aa15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 ABCB6Q9NP58 842 aa15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 ARAP3Q8WWN8 1544 aa15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 GLRX3O76003 335 aaKnown RBP15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 ACBD3Q9H3P7 528 aa15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 EXOC5O00471 708 aa15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 IKBKBO14920 756 aa15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 CUTAO60888 179 aa15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 MAP2K1Q02750 393 aaPredicted RBP15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 CEBPZQ03701 1054 aaKnown RBP15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 CASP8Q14790 479 aa15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 FSIP1Q8NA03 581 aa15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 ERCC4Q92889 916 aaPredicted RBP15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 FBXW7Q969H0 707 aa15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 PLEKHA4Q9H4M7 779 aa15.32■□□□□ 0.04
SPTSSB-201ENST00000359175 SLC27A2O14975 620 aa15.31■□□□□ 0.04
SPTSSB-201ENST00000359175 CBFA2T2O43439 604 aa15.31■□□□□ 0.04
SPTSSB-201ENST00000359175 POLA2Q14181 598 aa15.31■□□□□ 0.04
SPTSSB-201ENST00000359175 DDX11Q96FC9 970 aa15.31■□□□□ 0.04
SPTSSB-201ENST00000359175 PNKPQ96T60 521 aa15.31■□□□□ 0.04
SPTSSB-201ENST00000359175 PTPRMP28827 1452 aa15.31■□□□□ 0.04
SPTSSB-201ENST00000359175 SURF6O75683 361 aaKnown RBP15.31■□□□□ 0.04
SPTSSB-201ENST00000359175 COL9A3Q14050 684 aaPredicted RBP15.31■□□□□ 0.04
SPTSSB-201ENST00000359175 C11orf91Q3C1V1 193 aa15.31■□□□□ 0.04
SPTSSB-201ENST00000359175 CEP112Q8N8E3 955 aa15.31■□□□□ 0.04
SPTSSB-201ENST00000359175 CCDC102AQ96A19 550 aa15.31■□□□□ 0.04
SPTSSB-201ENST00000359175 SDF4Q9BRK5 362 aa15.31■□□□□ 0.04
SPTSSB-201ENST00000359175 GBP3Q9H0R5 595 aa15.31■□□□□ 0.04
SPTSSB-201ENST00000359175 JAK2O60674 1132 aa15.3■□□□□ 0.04
SPTSSB-201ENST00000359175 TTLL5Q6EMB2 1281 aa15.3■□□□□ 0.04
SPTSSB-201ENST00000359175 NLRP12P59046 1061 aa15.3■□□□□ 0.04
SPTSSB-201ENST00000359175 PPP2R5AQ15172 486 aa15.3■□□□□ 0.04
SPTSSB-201ENST00000359175 VSTM4Q8IW00 320 aa15.3■□□□□ 0.04
SPTSSB-201ENST00000359175 CABP1Q9NZU7 370 aa15.3■□□□□ 0.04
SPTSSB-201ENST00000359175 CRB1P82279 1406 aa15.3■□□□□ 0.04
SPTSSB-201ENST00000359175 IRF6O14896 467 aa15.3■□□□□ 0.04
SPTSSB-201ENST00000359175 TUBBP07437 444 aa15.3■□□□□ 0.04
SPTSSB-201ENST00000359175 SCP2P22307 547 aa15.3■□□□□ 0.04
SPTSSB-201ENST00000359175 TMED8Q6PL24 325 aaPredicted RBP15.3■□□□□ 0.04
SPTSSB-201ENST00000359175 MCM10Q7L590 875 aa15.3■□□□□ 0.04
SPTSSB-201ENST00000359175 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.3■□□□□ 0.04
SPTSSB-201ENST00000359175 AFAP1L1Q8TED9 768 aa15.3■□□□□ 0.04
SPTSSB-201ENST00000359175 TBC1D22AQ8WUA7 517 aa15.3■□□□□ 0.04
SPTSSB-201ENST00000359175 STK3Q13188 491 aa15.29■□□□□ 0.04
SPTSSB-201ENST00000359175 NAA16Q6N069 864 aaPredicted RBP15.29■□□□□ 0.04
SPTSSB-201ENST00000359175 MRPS27Q92552 414 aaKnown RBP15.29■□□□□ 0.04
SPTSSB-201ENST00000359175 ZNF396Q96N95 335 aaPredicted RBP15.29■□□□□ 0.04
SPTSSB-201ENST00000359175 HSD3B7Q9H2F3 369 aa15.29■□□□□ 0.04
SPTSSB-201ENST00000359175 SUGCTQ9HAC7 445 aa15.29■□□□□ 0.04
SPTSSB-201ENST00000359175 AARSP49588 968 aaKnown RBP eCLIP15.29■□□□□ 0.04
SPTSSB-201ENST00000359175 UBASH3AP57075 661 aa15.29■□□□□ 0.04
SPTSSB-201ENST00000359175 TUBB2AQ13885 445 aa15.29■□□□□ 0.04
SPTSSB-201ENST00000359175 USP28Q96RU2 1077 aa15.29■□□□□ 0.04
SPTSSB-201ENST00000359175 TUBB2BQ9BVA1 445 aa15.29■□□□□ 0.04
SPTSSB-201ENST00000359175 SNRKQ9NRH2 765 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms