RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 TMC6Q7Z403 805 aa16.74■□□□□ 0.27
APP-205ENST00000358918 MNS1Q8NEH6 495 aa16.74■□□□□ 0.27
APP-205ENST00000358918 CHPF2Q9P2E5 772 aa16.74■□□□□ 0.27
APP-205ENST00000358918 RCOR1Q9UKL0 485 aa16.74■□□□□ 0.27
APP-205ENST00000358918 A0A087WWV3 80 aa16.74■□□□□ 0.27
APP-205ENST00000358918 ATP8B1O43520 1251 aa16.74■□□□□ 0.27
APP-205ENST00000358918 TPM1P09493 284 aa16.74■□□□□ 0.27
APP-205ENST00000358918 HSP90B1P14625 803 aaKnown RBP16.74■□□□□ 0.27
APP-205ENST00000358918 MUM1L1Q5H9M0 696 aa16.74■□□□□ 0.27
APP-205ENST00000358918 NEK11Q8NG66 645 aa16.74■□□□□ 0.27
APP-205ENST00000358918 DNAAF4Q8WXU2 420 aa16.74■□□□□ 0.27
APP-205ENST00000358918 RAPGEF4Q8WZA2 1011 aa16.74■□□□□ 0.27
APP-205ENST00000358918 SYTL4Q96C24 671 aaPredicted RBP16.74■□□□□ 0.27
APP-205ENST00000358918 SPATA31A3Q5VYP0 1347 aa16.74■□□□□ 0.27
APP-205ENST00000358918 PHLPP2Q6ZVD8 1323 aa16.74■□□□□ 0.27
APP-205ENST00000358918 CAMTA1Q9Y6Y1 1673 aa16.73■□□□□ 0.27
APP-205ENST00000358918 A0A0D9SFI3 127 aa16.73■□□□□ 0.27
APP-205ENST00000358918 ANXA1P04083 346 aa16.73■□□□□ 0.27
APP-205ENST00000358918 GPS2Q13227 327 aa16.73■□□□□ 0.27
APP-205ENST00000358918 BRINP3Q76B58 766 aa16.73■□□□□ 0.27
APP-205ENST00000358918 SRRTQ9BXP5 876 aaKnown RBP16.73■□□□□ 0.27
APP-205ENST00000358918 TAF6LQ9Y6J9 622 aa16.73■□□□□ 0.27
APP-205ENST00000358918 KDM3BQ7LBC6 1761 aa16.73■□□□□ 0.27
APP-205ENST00000358918 MTX1Q13505 466 aa16.73■□□□□ 0.27
APP-205ENST00000358918 KRT32Q14532 448 aa16.73■□□□□ 0.27
APP-205ENST00000358918 ARMCX5Q6P1M9 558 aa16.73■□□□□ 0.27
APP-205ENST00000358918 FBXW7Q969H0 707 aa16.73■□□□□ 0.27
APP-205ENST00000358918 FSD1Q9BTV5 496 aa16.73■□□□□ 0.27
APP-205ENST00000358918 ETF1P62495 437 aaKnown RBP16.72■□□□□ 0.27
APP-205ENST00000358918 ZRSR1Q15695 479 aaKnown RBP16.72■□□□□ 0.27
APP-205ENST00000358918 TSGA10IPQ3SY00 556 aa16.72■□□□□ 0.27
APP-205ENST00000358918 FSIP1Q8NA03 581 aa16.72■□□□□ 0.27
APP-205ENST00000358918 ZNF396Q96N95 335 aaPredicted RBP16.72■□□□□ 0.27
APP-205ENST00000358918 DNAI1Q9UI46 699 aa16.72■□□□□ 0.27
APP-205ENST00000358918 LMTK3Q96Q04 1460 aa16.72■□□□□ 0.27
APP-205ENST00000358918 HOXB7P09629 217 aa16.72■□□□□ 0.27
APP-205ENST00000358918 ADD1P35611 737 aaKnown RBP16.72■□□□□ 0.27
APP-205ENST00000358918 ENGASEQ8NFI3 743 aa16.72■□□□□ 0.27
APP-205ENST00000358918 XPO4Q9C0E2 1151 aaKnown RBP16.72■□□□□ 0.27
APP-205ENST00000358918 ZNF335Q9H4Z2 1342 aaPredicted RBP16.72■□□□□ 0.27
APP-205ENST00000358918 NAA16Q6N069 864 aaPredicted RBP16.71■□□□□ 0.27
APP-205ENST00000358918 KRBA2Q6ZNG9 492 aa16.71■□□□□ 0.27
APP-205ENST00000358918 IFNKQ9P0W0 207 aa16.71■□□□□ 0.27
APP-205ENST00000358918 MED23Q9ULK4 1368 aa16.71■□□□□ 0.27
APP-205ENST00000358918 CACNA1FO60840 1977 aa16.71■□□□□ 0.27
APP-205ENST00000358918 PI4KAP2A4QPH2 592 aa16.71■□□□□ 0.26
APP-205ENST00000358918 TATP17735 454 aaPredicted RBP16.71■□□□□ 0.26
APP-205ENST00000358918 ATL3Q6DD88 541 aa16.71■□□□□ 0.26
APP-205ENST00000358918 PI4KAP1Q8N8J0 262 aa16.71■□□□□ 0.26
APP-205ENST00000358918 FTOQ9C0B1 505 aaKnown RBP eCLIP16.71■□□□□ 0.263e-6■□□□□ 10.9
APP-205ENST00000358918 XIRP1Q702N8 1843 aaKnown RBP16.7■□□□□ 0.26
APP-205ENST00000358918 TADA3O75528 432 aa16.7■□□□□ 0.26
APP-205ENST00000358918 ME1P48163 572 aa16.7■□□□□ 0.26
APP-205ENST00000358918 CCDC158Q5M9N0 1113 aa16.7■□□□□ 0.26
APP-205ENST00000358918 PA2G4Q9UQ80 394 aaKnown RBP16.7■□□□□ 0.26
APP-205ENST00000358918 PRAMEF22A3QJZ6 481 aa16.7■□□□□ 0.26
APP-205ENST00000358918 EFCAB8A8MWE9 144 aa16.7■□□□□ 0.26
APP-205ENST00000358918 TNNT3P45378 269 aaPredicted RBP16.7■□□□□ 0.26
APP-205ENST00000358918 SMARCE1Q969G3 411 aa16.7■□□□□ 0.26
APP-205ENST00000358918 NEK1Q96PY6 1258 aa16.7■□□□□ 0.26
APP-205ENST00000358918 BPIFA3Q9BQP9 254 aa16.7■□□□□ 0.26
APP-205ENST00000358918 SEC31AO94979 1220 aaKnown RBP16.69■□□□□ 0.26
APP-205ENST00000358918 OAS2P29728 719 aaKnown RBP16.69■□□□□ 0.26
APP-205ENST00000358918 Q6ZUG5 572 aa16.69■□□□□ 0.26
APP-205ENST00000358918 USP28Q96RU2 1077 aa16.69■□□□□ 0.26
APP-205ENST00000358918 SDF4Q9BRK5 362 aa16.69■□□□□ 0.26
APP-205ENST00000358918 LLPHQ9BRT6 129 aaKnown RBP16.69■□□□□ 0.26
APP-205ENST00000358918 UBXN6Q9BZV1 441 aa16.69■□□□□ 0.26
APP-205ENST00000358918 RASSF4Q9H2L5 321 aa16.69■□□□□ 0.26
APP-205ENST00000358918 CWC15Q9P013 229 aaKnown RBP16.69■□□□□ 0.26
APP-205ENST00000358918 STRCQ7RTU9 1775 aa16.69■□□□□ 0.26
APP-205ENST00000358918 JCADQ9P266 1359 aa16.69■□□□□ 0.26
APP-205ENST00000358918 URI1O94763 535 aaPredicted RBP16.69■□□□□ 0.26
APP-205ENST00000358918 FOSBP53539 338 aa16.69■□□□□ 0.26
APP-205ENST00000358918 LRRFIP1Q32MZ4 808 aaKnown RBP16.69■□□□□ 0.26
APP-205ENST00000358918 SMARCC2Q8TAQ2 1214 aa16.69■□□□□ 0.26
APP-205ENST00000358918 ERCC4Q92889 916 aaPredicted RBP16.69■□□□□ 0.26
APP-205ENST00000358918 MEGF6O75095 1541 aa16.68■□□□□ 0.26
APP-205ENST00000358918 OVOS2A0A0G2JMS6 1433 aa16.68■□□□□ 0.26
APP-205ENST00000358918 COL18A1P39060 1754 aa16.68■□□□□ 0.26
APP-205ENST00000358918 ST5P78524 1137 aa16.68■□□□□ 0.26
APP-205ENST00000358918 MRPS27Q92552 414 aaKnown RBP16.68■□□□□ 0.26
APP-205ENST00000358918 CHMP4AQ9BY43 222 aa16.68■□□□□ 0.26
APP-205ENST00000358918 HDAC5Q9UQL6 1122 aa16.68■□□□□ 0.26
APP-205ENST00000358918 ZNF589Q86UQ0 364 aaPredicted RBP16.67■□□□□ 0.26
APP-205ENST00000358918 CARD6Q9BX69 1037 aa16.67■□□□□ 0.26
APP-205ENST00000358918 BOLA2Q9H3K6 86 aa16.67■□□□□ 0.26
APP-205ENST00000358918 C9orf78Q9NZ63 289 aaPredicted RBP16.67■□□□□ 0.26
APP-205ENST00000358918 SLAIN2Q9P270 581 aa16.67■□□□□ 0.26
APP-205ENST00000358918 PHKG2P15735 406 aa16.67■□□□□ 0.26
APP-205ENST00000358918 EVCP57679 992 aa16.67■□□□□ 0.26
APP-205ENST00000358918 SCRN1Q12765 414 aa16.67■□□□□ 0.26
APP-205ENST00000358918 SLC39A6Q13433 755 aa16.67■□□□□ 0.26
APP-205ENST00000358918 SMC1AQ14683 1233 aaKnown RBP16.67■□□□□ 0.26
APP-205ENST00000358918 ZSCAN26Q16670 478 aa16.67■□□□□ 0.26
APP-205ENST00000358918 AK7Q96M32 723 aa16.67■□□□□ 0.26
APP-205ENST00000358918 CCDC8Q9H0W5 538 aaPredicted RBP16.67■□□□□ 0.26
APP-205ENST00000358918 TAF5LO75529 589 aa16.66■□□□□ 0.26
APP-205ENST00000358918 PROSER3Q2NL68 480 aa16.66■□□□□ 0.26
APP-205ENST00000358918 DPCR1Q3MIW9 517 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms