RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 PIBF1Q8WXW3 757 aa9.71□□□□□ -0.86
CD46-205ENST00000358170 FUCA2Q9BTY2 467 aa9.71□□□□□ -0.86
CD46-205ENST00000358170 INCENPQ9NQS7 918 aa9.71□□□□□ -0.86
CD46-205ENST00000358170 CFAP45Q9UL16 551 aa9.71□□□□□ -0.86
CD46-205ENST00000358170 KLF18A0A0U1RQI7 1052 aa9.7□□□□□ -0.86
CD46-205ENST00000358170 GOLGA8BA8MQT2 603 aa9.7□□□□□ -0.86
CD46-205ENST00000358170 KINO60870 393 aaKnown RBP9.7□□□□□ -0.86
CD46-205ENST00000358170 GNL2Q13823 731 aaKnown RBP9.7□□□□□ -0.86
CD46-205ENST00000358170 UBE2Q2Q8WVN8 375 aa9.7□□□□□ -0.86
CD46-205ENST00000358170 KCNF1Q9H3M0 494 aa9.7□□□□□ -0.86
CD46-205ENST00000358170 ATP2B1P20020 1258 aa9.7□□□□□ -0.86
CD46-205ENST00000358170 CASP7P55210 303 aa9.7□□□□□ -0.86
CD46-205ENST00000358170 RESTQ13127 1097 aa9.7□□□□□ -0.86
CD46-205ENST00000358170 ARID5BQ14865 1188 aa9.7□□□□□ -0.86
CD46-205ENST00000358170 RRP12Q5JTH9 1297 aaKnown RBP9.7□□□□□ -0.86
CD46-205ENST00000358170 PUS7LQ9H0K6 701 aaKnown RBP9.7□□□□□ -0.86
CD46-205ENST00000358170 PRDM10Q9NQV6 1147 aa9.7□□□□□ -0.86
CD46-205ENST00000358170 CTDNEP1O95476 244 aa9.69□□□□□ -0.86
CD46-205ENST00000358170 IL2RBP14784 551 aa9.69□□□□□ -0.86
CD46-205ENST00000358170 STK38Q15208 465 aa9.69□□□□□ -0.86
CD46-205ENST00000358170 KIF6Q6ZMV9 814 aa9.69□□□□□ -0.86
CD46-205ENST00000358170 DDX19AQ9NUU7 478 aaKnown RBP9.69□□□□□ -0.86
CD46-205ENST00000358170 IQSEC3Q9UPP2 1182 aaPredicted RBP9.69□□□□□ -0.86
CD46-205ENST00000358170 FGAP02671 866 aa9.69□□□□□ -0.86
CD46-205ENST00000358170 MARCKSP29966 332 aaPredicted RBP9.69□□□□□ -0.86
CD46-205ENST00000358170 PDIA3P30101 505 aaKnown RBP9.69□□□□□ -0.86
CD46-205ENST00000358170 CHAF1AQ13111 956 aaPredicted RBP9.69□□□□□ -0.86
CD46-205ENST00000358170 CHMP4CQ96CF2 233 aa9.69□□□□□ -0.86
CD46-205ENST00000358170 AIFM3Q96NN9 605 aa9.69□□□□□ -0.86
CD46-205ENST00000358170 MYL10Q9BUA6 226 aa9.69□□□□□ -0.86
CD46-205ENST00000358170 CLSTN2Q9H4D0 955 aa9.69□□□□□ -0.86
CD46-205ENST00000358170 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.69□□□□□ -0.866e-9■■□□□ 12.6
CD46-205ENST00000358170 ORC3Q9UBD5 711 aaPredicted RBP9.69□□□□□ -0.86
CD46-205ENST00000358170 CLIP2Q9UDT6 1046 aa9.69□□□□□ -0.86
CD46-205ENST00000358170 PRC1O43663 620 aa9.69□□□□□ -0.86
CD46-205ENST00000358170 HLFQ16534 295 aa9.69□□□□□ -0.86
CD46-205ENST00000358170 IMMTQ16891 758 aaKnown RBP9.69□□□□□ -0.86
CD46-205ENST00000358170 ZMYM1Q5SVZ6 1142 aa9.69□□□□□ -0.86
CD46-205ENST00000358170 SLC9C2Q5TAH2 1124 aa9.69□□□□□ -0.86
CD46-205ENST00000358170 USPL1Q5W0Q7 1092 aa9.69□□□□□ -0.86
CD46-205ENST00000358170 C11orf57Q6ZUT1 292 aaPredicted RBP9.69□□□□□ -0.86
CD46-205ENST00000358170 TRMT1Q9NXH9 659 aaKnown RBP9.69□□□□□ -0.86
CD46-205ENST00000358170 TRMT112Q9UI30 125 aaKnown RBP9.69□□□□□ -0.86
CD46-205ENST00000358170 MARF1Q9Y4F3 1742 aaKnown RBP9.68□□□□□ -0.86
CD46-205ENST00000358170 NFXL1Q6ZNB6 911 aa9.68□□□□□ -0.86
CD46-205ENST00000358170 MICU3Q86XE3 530 aa9.68□□□□□ -0.86
CD46-205ENST00000358170 CCDC191Q8NCU4 936 aa9.68□□□□□ -0.86
CD46-205ENST00000358170 C8orf76Q96K31 380 aa9.68□□□□□ -0.86
CD46-205ENST00000358170 PDCL3Q9H2J4 239 aa9.68□□□□□ -0.86
CD46-205ENST00000358170 GOLPH3LQ9H4A5 285 aa9.68□□□□□ -0.86
CD46-205ENST00000358170 ZNF213O14771 459 aa9.68□□□□□ -0.86
CD46-205ENST00000358170 NPHP1O15259 732 aa9.68□□□□□ -0.86
CD46-205ENST00000358170 PFKFB2O60825 505 aa9.68□□□□□ -0.86
CD46-205ENST00000358170 GREM2Q9H772 168 aa9.68□□□□□ -0.86
CD46-205ENST00000358170 KIF3AQ9Y496 699 aa9.68□□□□□ -0.86
CD46-205ENST00000358170 TRDNQ13061 729 aa9.67□□□□□ -0.86
CD46-205ENST00000358170 ATP2B3Q16720 1220 aa9.67□□□□□ -0.86
CD46-205ENST00000358170 PTPN21Q16825 1174 aa9.67□□□□□ -0.86
CD46-205ENST00000358170 HSP90AA4PQ58FG1 418 aa9.67□□□□□ -0.86
CD46-205ENST00000358170 SYNE3Q6ZMZ3 975 aa9.67□□□□□ -0.86
CD46-205ENST00000358170 HELLSQ9NRZ9 838 aa9.67□□□□□ -0.86
CD46-205ENST00000358170 SPATA31A3Q5VYP0 1347 aa9.67□□□□□ -0.86
CD46-205ENST00000358170 PCDH11XQ9BZA7 1347 aa9.67□□□□□ -0.86
CD46-205ENST00000358170 PCDH11YQ9BZA8 1340 aa9.67□□□□□ -0.86
CD46-205ENST00000358170 GPAA1O43292 621 aa9.67□□□□□ -0.86
CD46-205ENST00000358170 HMGB1P09429 215 aaKnown RBP9.67□□□□□ -0.86
CD46-205ENST00000358170 ITGA6P23229 1130 aa9.67□□□□□ -0.86
CD46-205ENST00000358170 ADD1P35611 737 aaKnown RBP9.67□□□□□ -0.86
CD46-205ENST00000358170 TCIRG1Q13488 830 aa9.67□□□□□ -0.86
CD46-205ENST00000358170 TPD52L1Q16890 204 aaPredicted RBP9.67□□□□□ -0.86
CD46-205ENST00000358170 BRINP3Q76B58 766 aa9.67□□□□□ -0.86
CD46-205ENST00000358170 PHKBQ93100 1093 aa9.67□□□□□ -0.86
CD46-205ENST00000358170 ZSCAN16Q9H4T2 348 aaPredicted RBP9.67□□□□□ -0.86
CD46-205ENST00000358170 CLIC4Q9Y696 253 aa9.67□□□□□ -0.86
CD46-205ENST00000358170 RGPD5Q99666 1765 aa9.67□□□□□ -0.86
CD46-205ENST00000358170 TSGA10IPQ3SY00 556 aa9.66□□□□□ -0.86
CD46-205ENST00000358170 AOPEPQ8N6M6 819 aa9.66□□□□□ -0.86
CD46-205ENST00000358170 ZNF396Q96N95 335 aaPredicted RBP9.66□□□□□ -0.86
CD46-205ENST00000358170 ZKSCAN3Q9BRR0 538 aa9.66□□□□□ -0.86
CD46-205ENST00000358170 HMGN5P82970 282 aaKnown RBP9.66□□□□□ -0.86
CD46-205ENST00000358170 KIAA1524Q8TCG1 905 aa9.66□□□□□ -0.86
CD46-205ENST00000358170 PIGBQ92521 554 aa9.66□□□□□ -0.86
CD46-205ENST00000358170 ELP1O95163 1332 aa9.66□□□□□ -0.86
CD46-205ENST00000358170 MED1Q15648 1581 aaPredicted RBP9.66□□□□□ -0.86
CD46-205ENST00000358170 SPDYE4A6NLX3 237 aa9.66□□□□□ -0.86
CD46-205ENST00000358170 B4E1Z4 1266 aa9.66□□□□□ -0.86
CD46-205ENST00000358170 UBE2Q2LH0YL09 131 aa9.66□□□□□ -0.86
CD46-205ENST00000358170 RIOK3O14730 519 aaKnown RBP9.66□□□□□ -0.86
CD46-205ENST00000358170 SMC2O95347 1197 aa9.66□□□□□ -0.86
CD46-205ENST00000358170 ZNF75DP51815 510 aa9.66□□□□□ -0.86
CD46-205ENST00000358170 CCDC144BQ3MJ40 725 aa9.66□□□□□ -0.86
CD46-205ENST00000358170 CMTR1Q8N1G2 835 aaKnown RBP9.66□□□□□ -0.86
CD46-205ENST00000358170 DSCC1Q9BVC3 393 aa9.66□□□□□ -0.86
CD46-205ENST00000358170 BTG4Q9NY30 223 aa9.66□□□□□ -0.86
CD46-205ENST00000358170 KDM3BQ7LBC6 1761 aa9.65□□□□□ -0.86
CD46-205ENST00000358170 DYNC1I1O14576 645 aa9.65□□□□□ -0.86
CD46-205ENST00000358170 STARD3NLO95772 234 aa9.65□□□□□ -0.86
CD46-205ENST00000358170 SPECC1Q5M775 1068 aa9.65□□□□□ -0.86
CD46-205ENST00000358170 CACTINQ8WUQ7 758 aaKnown RBP9.65□□□□□ -0.86
CD46-205ENST00000358170 ZMYND15Q9H091 742 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms