RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 PPP1R2P41236 205 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 AP1ARQ63HQ0 302 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 CEBPZQ03701 1054 aaKnown RBP7.5□□□□□ -1.21
TRIM38-201ENST00000357085 RNF187Q5TA31 235 aaPredicted RBP7.5□□□□□ -1.21
TRIM38-201ENST00000357085 MSL1Q68DK7 614 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 ORC3Q9UBD5 711 aaPredicted RBP7.5□□□□□ -1.21
TRIM38-201ENST00000357085 IKBKBO14920 756 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 CLSTN1O94985 981 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 GBP1P32455 592 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 LRMPQ12912 555 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 CCDC181Q5TID7 509 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 CCDC121Q6ZUS5 278 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 TRIML1Q8N9V2 468 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 IFT74Q96LB3 600 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 VWDEQ8N2E2 1590 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 SEPT2Q15019 361 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 TRAK1Q9UPV9 953 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 TULP2O00295 520 aa7.49□□□□□ -1.21
TRIM38-201ENST00000357085 CEP128Q6ZU80 1094 aa7.49□□□□□ -1.21
TRIM38-201ENST00000357085 C3orf20Q8ND61 904 aa7.49□□□□□ -1.21
TRIM38-201ENST00000357085 PPP2R5AQ15172 486 aa7.49□□□□□ -1.21
TRIM38-201ENST00000357085 PPP2R5EQ16537 467 aa7.49□□□□□ -1.21
TRIM38-201ENST00000357085 NUTM2DQ5VT03 806 aaPredicted RBP7.49□□□□□ -1.21
TRIM38-201ENST00000357085 NUTM2AQ8IVF1 878 aaPredicted RBP7.49□□□□□ -1.21
TRIM38-201ENST00000357085 ZBTB9Q96C00 473 aa7.49□□□□□ -1.21
TRIM38-201ENST00000357085 ANKRD27Q96NW4 1050 aa7.49□□□□□ -1.21
TRIM38-201ENST00000357085 SPA17Q15506 151 aa7.49□□□□□ -1.21
TRIM38-201ENST00000357085 ALDH8A1Q9H2A2 487 aaPredicted RBP7.49□□□□□ -1.21
TRIM38-201ENST00000357085 SMARCA5O60264 1052 aaPredicted RBP7.49□□□□□ -1.21
TRIM38-201ENST00000357085 CCHCR1Q8TD31 782 aa7.49□□□□□ -1.21
TRIM38-201ENST00000357085 VPS36Q86VN1 386 aa7.49□□□□□ -1.21
TRIM38-201ENST00000357085 SBNO1A3KN83 1393 aa7.49□□□□□ -1.21
TRIM38-201ENST00000357085 NPATQ14207 1427 aa7.49□□□□□ -1.21
TRIM38-201ENST00000357085 NEDD9Q14511 834 aa7.49□□□□□ -1.21
TRIM38-201ENST00000357085 IFI16Q16666 785 aaKnown RBP7.49□□□□□ -1.21
TRIM38-201ENST00000357085 SUFUQ9UMX1 484 aa7.49□□□□□ -1.21
TRIM38-201ENST00000357085 GCOM1H8Y6P7 765 aaPredicted RBP7.49□□□□□ -1.21
TRIM38-201ENST00000357085 KRT86O43790 486 aa7.49□□□□□ -1.21
TRIM38-201ENST00000357085 HSF2BPO75031 334 aa7.49□□□□□ -1.21
TRIM38-201ENST00000357085 MYZAPP0CAP1 466 aa7.49□□□□□ -1.21
TRIM38-201ENST00000357085 TADA2BQ86TJ2 420 aa7.49□□□□□ -1.21
TRIM38-201ENST00000357085 OSBPL5Q9H0X9 879 aaPredicted RBP7.49□□□□□ -1.21
TRIM38-201ENST00000357085 CWC25Q9NXE8 425 aaPredicted RBP7.49□□□□□ -1.21
TRIM38-201ENST00000357085 MROH1Q8NDA8 1641 aa7.49□□□□□ -1.21
TRIM38-201ENST00000357085 ALDH1L1O75891 902 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 CHMLP26374 656 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 CEP85Q6P2H3 762 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 CEP57Q86XR8 500 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 MBIPQ9NS73 344 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 ERICH2A1L162 156 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 OTUD6BQ8N6M0 293 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 RASSF8Q8NHQ8 419 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 MOV10L1Q9BXT6 1211 aaKnown RBP7.48□□□□□ -1.21
TRIM38-201ENST00000357085 ETF1P62495 437 aaKnown RBP7.48□□□□□ -1.21
TRIM38-201ENST00000357085 NAA25Q14CX7 972 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 CCDC155Q8N6L0 562 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 AOPEPQ8N6M6 819 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.48□□□□□ -1.21
TRIM38-201ENST00000357085 SPATS2LQ9NUQ6 558 aaKnown RBP7.48□□□□□ -1.21
TRIM38-201ENST00000357085 STAP2Q9UGK3 403 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 MYH15Q9Y2K3 1946 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 SURF6O75683 361 aaKnown RBP7.48□□□□□ -1.21
TRIM38-201ENST00000357085 MYCNP04198 464 aaPredicted RBP7.48□□□□□ -1.21
TRIM38-201ENST00000357085 SLC4A2P04920 1241 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 SEMA3FQ13275 785 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 DYDC1Q8WWB3 177 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 CABS1Q96KC9 395 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 MPHOSPH10O00566 681 aaKnown RBP7.48□□□□□ -1.21
TRIM38-201ENST00000357085 MTMR3Q13615 1198 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 CCDC102BQ68D86 513 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 KCNF1Q9H3M0 494 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 VEZTQ9HBM0 779 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 GOLGA8KD6RF30 607 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 TMED8Q6PL24 325 aaPredicted RBP7.48□□□□□ -1.21
TRIM38-201ENST00000357085 RUFY3Q7L099 469 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 CACNA2D4Q7Z3S7 1137 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 DTNBP1Q96EV8 351 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 CXorf56Q9H5V9 222 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 SUDS3Q9H7L9 328 aaPredicted RBP7.48□□□□□ -1.21
TRIM38-201ENST00000357085 STX10O60499 249 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 EIF3CLB5ME19 914 aaKnown RBP7.48□□□□□ -1.21
TRIM38-201ENST00000357085 CFAP70Q5T0N1 1121 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 FSIP1Q8NA03 581 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 EIF3CQ99613 913 aaKnown RBP7.48□□□□□ -1.21
TRIM38-201ENST00000357085 KIF2CQ99661 725 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 DONSONQ9NYP3 566 aa7.48□□□□□ -1.21
TRIM38-201ENST00000357085 NSFL1CQ9UNZ2 370 aaKnown RBP7.47□□□□□ -1.21
TRIM38-201ENST00000357085 PRPHP41219 470 aa7.47□□□□□ -1.21
TRIM38-201ENST00000357085 MYL5Q02045 173 aa7.47□□□□□ -1.21
TRIM38-201ENST00000357085 ZKSCAN8Q15776 578 aaPredicted RBP7.47□□□□□ -1.21
TRIM38-201ENST00000357085 E2F4Q16254 413 aa7.47□□□□□ -1.21
TRIM38-201ENST00000357085 PRPF40BQ6NWY9 871 aaKnown RBP7.47□□□□□ -1.21
TRIM38-201ENST00000357085 RBBP5Q15291 538 aaKnown RBP7.47□□□□□ -1.21
TRIM38-201ENST00000357085 GDAP1L1Q96MZ0 367 aa7.47□□□□□ -1.21
TRIM38-201ENST00000357085 A0A1W2PP64 1363 aa7.47□□□□□ -1.21
TRIM38-201ENST00000357085 MAP3K15Q6ZN16 1313 aa7.47□□□□□ -1.21
TRIM38-201ENST00000357085 PHACTR2O75167 634 aa7.47□□□□□ -1.21
TRIM38-201ENST00000357085 SAFB2Q14151 953 aaKnown RBP eCLIP7.47□□□□□ -1.21
TRIM38-201ENST00000357085 CFAP58Q5T655 872 aa7.47□□□□□ -1.21
TRIM38-201ENST00000357085 TMTC1Q8IUR5 882 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms