RNA–Protein interactions for RNA: ENST00000357058.7

RNF38-204, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-204ENST00000357058 RIMBP3Q9UFD9 1639 aa23.33■■□□□ 1.33
RNF38-204ENST00000357058 ZSCAN30Q86W11 494 aa23.33■■□□□ 1.33
RNF38-204ENST00000357058 IBTKQ9P2D0 1353 aaPredicted RBP23.33■■□□□ 1.33
RNF38-204ENST00000357058 PRAMEF22A3QJZ6 481 aa23.33■■□□□ 1.32
RNF38-204ENST00000357058 KBTBD3Q8NAB2 608 aa23.33■■□□□ 1.32
RNF38-204ENST00000357058 ERBB4Q15303 1308 aa23.33■■□□□ 1.32
RNF38-204ENST00000357058 MBD4O95243 580 aa23.32■■□□□ 1.32
RNF38-204ENST00000357058 WDR17Q8IZU2 1322 aa23.32■■□□□ 1.32
RNF38-204ENST00000357058 KLHL10Q6JEL2 608 aa23.32■■□□□ 1.32
RNF38-204ENST00000357058 JAG2Q9Y219 1238 aa23.32■■□□□ 1.32
RNF38-204ENST00000357058 RPS6KB1P23443 525 aa23.32■■□□□ 1.32
RNF38-204ENST00000357058 CNBD1Q8NA66 436 aa23.32■■□□□ 1.32
RNF38-204ENST00000357058 CCDC12Q8WUD4 166 aaPredicted RBP23.32■■□□□ 1.32
RNF38-204ENST00000357058 ARGLU1Q9NWB6 273 aaPredicted RBP23.32■■□□□ 1.32
RNF38-204ENST00000357058 GIMAP6Q6P9H5 292 aa23.31■■□□□ 1.32
RNF38-204ENST00000357058 USP21Q9UK80 565 aa23.31■■□□□ 1.32
RNF38-204ENST00000357058 BIN1O00499 593 aa23.31■■□□□ 1.32
RNF38-204ENST00000357058 TAF5LO75529 589 aa23.31■■□□□ 1.32
RNF38-204ENST00000357058 PANK2Q9BZ23 570 aa23.31■■□□□ 1.32
RNF38-204ENST00000357058 ZNF335Q9H4Z2 1342 aaPredicted RBP23.3■■□□□ 1.32
RNF38-204ENST00000357058 PTPDC1A2A3K4 754 aa23.3■■□□□ 1.32
RNF38-204ENST00000357058 NEXMIFQ5QGS0 1516 aa23.3■■□□□ 1.32
RNF38-204ENST00000357058 DENND2AQ9ULE3 1009 aa23.3■■□□□ 1.32
RNF38-204ENST00000357058 STX1AQ16623 288 aa23.29■■□□□ 1.32
RNF38-204ENST00000357058 LRSAM1Q6UWE0 723 aa23.29■■□□□ 1.32
RNF38-204ENST00000357058 APPBP2Q92624 585 aa23.29■■□□□ 1.32
RNF38-204ENST00000357058 EAF2Q96CJ1 260 aaPredicted RBP23.29■■□□□ 1.32
RNF38-204ENST00000357058 ATP5JP18859 108 aa23.29■■□□□ 1.32
RNF38-204ENST00000357058 CAGE1Q8TC20 777 aa23.29■■□□□ 1.32
RNF38-204ENST00000357058 MCM9Q9NXL9 1143 aa23.29■■□□□ 1.32
RNF38-204ENST00000357058 CT47A1Q5JQC4 288 aaPredicted RBP23.28■■□□□ 1.32
RNF38-204ENST00000357058 LPIN2Q92539 896 aa23.28■■□□□ 1.32
RNF38-204ENST00000357058 ZC3H12CQ9C0D7 883 aaKnown RBP23.28■■□□□ 1.32
RNF38-204ENST00000357058 ADGRL3Q9HAR2 1447 aa23.28■■□□□ 1.32
RNF38-204ENST00000357058 CCDC178Q5BJE1 867 aa23.28■■□□□ 1.32
RNF38-204ENST00000357058 PICALMQ13492 652 aa23.28■■□□□ 1.32
RNF38-204ENST00000357058 PARP3Q9Y6F1 533 aa23.28■■□□□ 1.32
RNF38-204ENST00000357058 LDHBP07195 334 aaKnown RBP23.28■■□□□ 1.32
RNF38-204ENST00000357058 SYT1P21579 422 aa23.28■■□□□ 1.32
RNF38-204ENST00000357058 RAB34Q9BZG1 259 aa23.28■■□□□ 1.32
RNF38-204ENST00000357058 MED14O60244 1454 aa23.28■■□□□ 1.32
RNF38-204ENST00000357058 TMEM266Q2M3C6 531 aa23.27■■□□□ 1.32
RNF38-204ENST00000357058 ASAP1Q9ULH1 1129 aa23.27■■□□□ 1.32
RNF38-204ENST00000357058 EDC3Q96F86 508 aaKnown RBP23.27■■□□□ 1.32
RNF38-204ENST00000357058 PTPRMP28827 1452 aa23.27■■□□□ 1.32
RNF38-204ENST00000357058 KCNG4Q8TDN1 519 aa23.27■■□□□ 1.32
RNF38-204ENST00000357058 ZNF165P49910 485 aa23.26■■□□□ 1.31
RNF38-204ENST00000357058 TMEM132AQ24JP5 1023 aa23.26■■□□□ 1.31
RNF38-204ENST00000357058 GPAA1O43292 621 aa23.26■■□□□ 1.31
RNF38-204ENST00000357058 HSPA4P34932 840 aa23.26■■□□□ 1.31
RNF38-204ENST00000357058 BRINP3Q76B58 766 aa23.26■■□□□ 1.31
RNF38-204ENST00000357058 CABP5Q9NP86 173 aa23.26■■□□□ 1.31
RNF38-204ENST00000357058 ARHGEF40Q8TER5 1519 aa23.26■■□□□ 1.31
RNF38-204ENST00000357058 PNPLA6Q8IY17 1366 aa23.26■■□□□ 1.31
RNF38-204ENST00000357058 RXRAP19793 462 aa23.26■■□□□ 1.31
RNF38-204ENST00000357058 CTSWP56202 376 aa23.26■■□□□ 1.31
RNF38-204ENST00000357058 ZAP70P43403 619 aa23.25■■□□□ 1.31
RNF38-204ENST00000357058 DEF6Q9H4E7 631 aa23.25■■□□□ 1.31
RNF38-204ENST00000357058 CCDC102BQ68D86 513 aa23.25■■□□□ 1.31
RNF38-204ENST00000357058 FAM177A1Q8N128 213 aaPredicted RBP23.25■■□□□ 1.31
RNF38-204ENST00000357058 RBM17Q96I25 401 aaKnown RBP23.25■■□□□ 1.31
RNF38-204ENST00000357058 ARMT1Q9H993 441 aa23.25■■□□□ 1.31
RNF38-204ENST00000357058 MROH5Q6ZUA9 1318 aa23.25■■□□□ 1.31
RNF38-204ENST00000357058 CPSF1Q10570 1443 aaKnown RBP23.25■■□□□ 1.31
RNF38-204ENST00000357058 CUL5Q93034 780 aa23.25■■□□□ 1.31
RNF38-204ENST00000357058 CLIP2Q9UDT6 1046 aa23.25■■□□□ 1.31
RNF38-204ENST00000357058 RIMBP2O15034 1052 aa23.25■■□□□ 1.31
RNF38-204ENST00000357058 HIBADHP31937 336 aaKnown RBP23.25■■□□□ 1.31
RNF38-204ENST00000357058 CCDC24Q8N4L8 307 aa23.24■■□□□ 1.31
RNF38-204ENST00000357058 DACT1Q9NYF0 836 aa23.24■■□□□ 1.31
RNF38-204ENST00000357058 RTL9Q8NET4 1388 aa23.24■■□□□ 1.31
RNF38-204ENST00000357058 SFPQP23246 707 aaKnown RBP eCLIP23.24■■□□□ 1.31
RNF38-204ENST00000357058 ZBTB38Q8NAP3 1195 aaPredicted RBP23.24■■□□□ 1.31
RNF38-204ENST00000357058 SYKP43405 635 aa23.24■■□□□ 1.31
RNF38-204ENST00000357058 EIF5P55010 431 aaKnown RBP23.24■■□□□ 1.31
RNF38-204ENST00000357058 SPATA31A3Q5VYP0 1347 aa23.23■■□□□ 1.31
RNF38-204ENST00000357058 ADCY5O95622 1261 aa23.23■■□□□ 1.31
RNF38-204ENST00000357058 ISM2Q6H9L7 571 aa23.23■■□□□ 1.31
RNF38-204ENST00000357058 CCDC112Q8NEF3 446 aa23.23■■□□□ 1.31
RNF38-204ENST00000357058 MRPS27Q92552 414 aaKnown RBP23.23■■□□□ 1.31
RNF38-204ENST00000357058 AGLP35573 1532 aa23.23■■□□□ 1.31
RNF38-204ENST00000357058 PCCAP05165 728 aaPredicted RBP23.23■■□□□ 1.31
RNF38-204ENST00000357058 GNAQP50148 359 aa23.23■■□□□ 1.31
RNF38-204ENST00000357058 TCP11L1Q9NUJ3 509 aa23.23■■□□□ 1.31
RNF38-204ENST00000357058 PTCH1Q13635 1447 aa23.22■■□□□ 1.31
RNF38-204ENST00000357058 B4E1Z4 1266 aa23.22■■□□□ 1.31
RNF38-204ENST00000357058 PLCG2P16885 1265 aa23.22■■□□□ 1.31
RNF38-204ENST00000357058 ZKSCAN3Q9BRR0 538 aa23.22■■□□□ 1.31
RNF38-204ENST00000357058 PIK3C2BO00750 1634 aa23.22■■□□□ 1.31
RNF38-204ENST00000357058 CALM1P0DP23 149 aa23.22■■□□□ 1.31
RNF38-204ENST00000357058 CALM2P0DP24 149 aa23.22■■□□□ 1.31
RNF38-204ENST00000357058 CALM3P0DP25 149 aa23.22■■□□□ 1.31
RNF38-204ENST00000357058 MARCKSP29966 332 aaPredicted RBP23.22■■□□□ 1.31
RNF38-204ENST00000357058 AXIN2Q9Y2T1 843 aa23.22■■□□□ 1.31
RNF38-204ENST00000357058 MAP3K15Q6ZN16 1313 aa23.22■■□□□ 1.31
RNF38-204ENST00000357058 SIRT2Q8IXJ6 389 aa23.22■■□□□ 1.31
RNF38-204ENST00000357058 UVSSAQ2YD98 709 aa23.21■■□□□ 1.31
RNF38-204ENST00000357058 SPATA5Q8NB90 893 aa23.21■■□□□ 1.31
RNF38-204ENST00000357058 EPB41L2O43491 1005 aaKnown RBP23.21■■□□□ 1.31
RNF38-204ENST00000357058 UFL1O94874 794 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms