RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 STOX1Q6ZVD7 989 aa21.06■□□□□ 0.96
NPAS3-202ENST00000356141 QTRT2Q9H974 415 aaKnown RBP21.05■□□□□ 0.96
NPAS3-202ENST00000356141 PIH1D3Q9NQM4 214 aaKnown RBP21.05■□□□□ 0.96
NPAS3-202ENST00000356141 TAF1P21675 1872 aa21.05■□□□□ 0.96
NPAS3-202ENST00000356141 SAMD1Q6SPF0 538 aaPredicted RBP21.05■□□□□ 0.96
NPAS3-202ENST00000356141 DDX49Q9Y6V7 483 aaKnown RBP21.05■□□□□ 0.96
NPAS3-202ENST00000356141 RNF113AO15541 343 aaKnown RBP21.05■□□□□ 0.96
NPAS3-202ENST00000356141 KDM4AO75164 1064 aa21.05■□□□□ 0.96
NPAS3-202ENST00000356141 CYP2E1P05181 493 aaPredicted RBP21.05■□□□□ 0.96
NPAS3-202ENST00000356141 GPHNQ9NQX3 736 aaPredicted RBP21.05■□□□□ 0.96
NPAS3-202ENST00000356141 APPP05067 770 aa21.04■□□□□ 0.96
NPAS3-202ENST00000356141 SLC9C2Q5TAH2 1124 aa21.04■□□□□ 0.96
NPAS3-202ENST00000356141 BCL2L12Q9HB09 334 aa21.04■□□□□ 0.96
NPAS3-202ENST00000356141 ZSWIM6Q9HCJ5 1215 aa21.04■□□□□ 0.96
NPAS3-202ENST00000356141 RBM27Q9P2N5 1060 aaKnown RBP21.04■□□□□ 0.96
NPAS3-202ENST00000356141 DENND2AQ9ULE3 1009 aa21.04■□□□□ 0.96
NPAS3-202ENST00000356141 COL4A1P02462 1669 aa21.04■□□□□ 0.96
NPAS3-202ENST00000356141 TRIM37O94972 964 aa21.04■□□□□ 0.96
NPAS3-202ENST00000356141 HSPD1P10809 573 aaKnown RBP21.04■□□□□ 0.96
NPAS3-202ENST00000356141 NUCB2P80303 420 aa21.04■□□□□ 0.96
NPAS3-202ENST00000356141 ST3GAL1Q11201 340 aa21.04■□□□□ 0.96
NPAS3-202ENST00000356141 GLIPR1L2Q4G1C9 344 aa21.04■□□□□ 0.96
NPAS3-202ENST00000356141 VPS37CA5D8V6 355 aaPredicted RBP21.03■□□□□ 0.96
NPAS3-202ENST00000356141 DDX11L8A8MPP1 907 aa21.03■□□□□ 0.96
NPAS3-202ENST00000356141 ZPR1O75312 459 aa21.03■□□□□ 0.96
NPAS3-202ENST00000356141 RNF20Q5VTR2 975 aa21.03■□□□□ 0.96
NPAS3-202ENST00000356141 FAM196AQ6ZSG2 479 aa21.03■□□□□ 0.96
NPAS3-202ENST00000356141 FERMT3Q86UX7 667 aa21.03■□□□□ 0.96
NPAS3-202ENST00000356141 VGLL2Q8N8G2 317 aa21.03■□□□□ 0.96
NPAS3-202ENST00000356141 WWC3Q9ULE0 1092 aa21.03■□□□□ 0.96
NPAS3-202ENST00000356141 CELF1Q92879 486 aaKnown RBP21.03■□□□□ 0.96
NPAS3-202ENST00000356141 ARHGEF1Q92888 912 aaKnown RBP21.03■□□□□ 0.96
NPAS3-202ENST00000356141 GPR108Q9NPR9 543 aa21.03■□□□□ 0.96
NPAS3-202ENST00000356141 LRRC4BQ9NT99 713 aa21.03■□□□□ 0.96
NPAS3-202ENST00000356141 NSFL1CQ9UNZ2 370 aaKnown RBP21.03■□□□□ 0.96
NPAS3-202ENST00000356141 SMC3Q9UQE7 1217 aa21.03■□□□□ 0.96
NPAS3-202ENST00000356141 GJB2P29033 226 aa21.02■□□□□ 0.96
NPAS3-202ENST00000356141 IGHMBP2P38935 993 aaKnown RBP21.02■□□□□ 0.96
NPAS3-202ENST00000356141 GYG1P46976 350 aa21.02■□□□□ 0.96
NPAS3-202ENST00000356141 CUL4AQ13619 759 aa21.02■□□□□ 0.96
NPAS3-202ENST00000356141 CCDC152Q4G0S7 254 aa21.02■□□□□ 0.96
NPAS3-202ENST00000356141 MCM2P49736 904 aa21.02■□□□□ 0.96
NPAS3-202ENST00000356141 NBPF5PQ86XG9 351 aaPredicted RBP21.02■□□□□ 0.96
NPAS3-202ENST00000356141 DDX11Q96FC9 970 aa21.02■□□□□ 0.96
NPAS3-202ENST00000356141 INCENPQ9NQS7 918 aa21.02■□□□□ 0.96
NPAS3-202ENST00000356141 CHRNDQ07001 517 aa21.01■□□□□ 0.95
NPAS3-202ENST00000356141 ZMYM1Q5SVZ6 1142 aa21.01■□□□□ 0.95
NPAS3-202ENST00000356141 FAM173BQ6P4H8 233 aa21.01■□□□□ 0.95
NPAS3-202ENST00000356141 Q6ZUG5 572 aa21.01■□□□□ 0.95
NPAS3-202ENST00000356141 CWC22Q9HCG8 908 aaKnown RBP21.01■□□□□ 0.95
NPAS3-202ENST00000356141 ZNF652Q9Y2D9 606 aa21.01■□□□□ 0.95
NPAS3-202ENST00000356141 BRF1Q92994 677 aa21.01■□□□□ 0.95
NPAS3-202ENST00000356141 NEK1Q96PY6 1258 aa21.01■□□□□ 0.95
NPAS3-202ENST00000356141 KLRK1P26718 216 aa21■□□□□ 0.95
NPAS3-202ENST00000356141 ABCF2Q9UG63 623 aa21■□□□□ 0.95
NPAS3-202ENST00000356141 RTCBQ9Y3I0 505 aaKnown RBP21■□□□□ 0.95
NPAS3-202ENST00000356141 ABCC12Q96J65 1359 aa21■□□□□ 0.95
NPAS3-202ENST00000356141 RPS6KB1P23443 525 aa21■□□□□ 0.95
NPAS3-202ENST00000356141 CCT2P78371 535 aaKnown RBP21■□□□□ 0.95
NPAS3-202ENST00000356141 RASGRF1Q13972 1273 aa21■□□□□ 0.95
NPAS3-202ENST00000356141 TOB2Q14106 344 aaPredicted RBP21■□□□□ 0.95
NPAS3-202ENST00000356141 CAVIN1Q6NZI2 390 aaKnown RBP21■□□□□ 0.95
NPAS3-202ENST00000356141 SETDB2Q96T68 719 aa21■□□□□ 0.95
NPAS3-202ENST00000356141 GOLGA6L22H0YM25 854 aa20.99■□□□□ 0.95
NPAS3-202ENST00000356141 PUM3Q15397 648 aaKnown RBP20.99■□□□□ 0.95
NPAS3-202ENST00000356141 MIGA1Q8NAN2 632 aa20.99■□□□□ 0.95
NPAS3-202ENST00000356141 HMG20BQ9P0W2 317 aa20.99■□□□□ 0.95
NPAS3-202ENST00000356141 JAK2O60674 1132 aa20.99■□□□□ 0.95
NPAS3-202ENST00000356141 APOBRQ0VD83 1088 aa20.98■□□□□ 0.95
NPAS3-202ENST00000356141 PARP10Q53GL7 1025 aa20.98■□□□□ 0.95
NPAS3-202ENST00000356141 NKX2-3Q8TAU0 364 aa20.98■□□□□ 0.95
NPAS3-202ENST00000356141 GPR101Q96P66 508 aaPredicted RBP20.98■□□□□ 0.95
NPAS3-202ENST00000356141 PANK2Q9BZ23 570 aa20.98■□□□□ 0.95
NPAS3-202ENST00000356141 NCOA5Q9HCD5 579 aaKnown RBP20.98■□□□□ 0.95
NPAS3-202ENST00000356141 TFCP2L1Q9NZI6 479 aa20.98■□□□□ 0.95
NPAS3-202ENST00000356141 GPAA1O43292 621 aa20.98■□□□□ 0.95
NPAS3-202ENST00000356141 SYT1P21579 422 aa20.98■□□□□ 0.95
NPAS3-202ENST00000356141 RFC4P35249 363 aa20.98■□□□□ 0.95
NPAS3-202ENST00000356141 SPATA31A6Q5VVP1 1343 aa20.98■□□□□ 0.95
NPAS3-202ENST00000356141 ZNF532Q9HCE3 1301 aa20.98■□□□□ 0.95
NPAS3-202ENST00000356141 PSMA5P28066 241 aa20.97■□□□□ 0.95
NPAS3-202ENST00000356141 MAGEB6Q8N7X4 407 aa20.97■□□□□ 0.95
NPAS3-202ENST00000356141 AK7Q96M32 723 aa20.97■□□□□ 0.95
NPAS3-202ENST00000356141 NWD2Q9ULI1 1742 aa20.97■□□□□ 0.95
NPAS3-202ENST00000356141 FOXP2O15409 715 aa20.97■□□□□ 0.95
NPAS3-202ENST00000356141 PAXIP1Q6ZW49 1069 aaPredicted RBP20.97■□□□□ 0.95
NPAS3-202ENST00000356141 U3KPZ7 1027 aaPredicted RBP20.97■□□□□ 0.95
NPAS3-202ENST00000356141 SLC4A8Q2Y0W8 1093 aa20.96■□□□□ 0.95
NPAS3-202ENST00000356141 LPIN2Q92539 896 aa20.96■□□□□ 0.95
NPAS3-202ENST00000356141 FGAP02671 866 aa20.96■□□□□ 0.95
NPAS3-202ENST00000356141 SLC5A1P13866 664 aa20.96■□□□□ 0.95
NPAS3-202ENST00000356141 RPAP1Q9BWH6 1393 aaPredicted RBP20.96■□□□□ 0.95
NPAS3-202ENST00000356141 BRD1O95696 1058 aa20.96■□□□□ 0.95
NPAS3-202ENST00000356141 CNPY2Q9Y2B0 182 aa20.96■□□□□ 0.95
NPAS3-202ENST00000356141 E7EWF7 191 aa20.95■□□□□ 0.94
NPAS3-202ENST00000356141 GADD45BO75293 160 aaPredicted RBP20.95■□□□□ 0.94
NPAS3-202ENST00000356141 GAS2L3Q86XJ1 694 aa20.95■□□□□ 0.94
NPAS3-202ENST00000356141 ANKRD18AQ8IVF6 992 aa20.95■□□□□ 0.94
NPAS3-202ENST00000356141 SPATA5Q8NB90 893 aa20.95■□□□□ 0.94
NPAS3-202ENST00000356141 HELLSQ9NRZ9 838 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms