RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 C16orf45Q96MC5 204 aaPredicted RBP21.27■□□□□ 0.99
PTP4A3-202ENST00000349124 RCOR1Q9UKL0 485 aa21.27■□□□□ 0.99
PTP4A3-202ENST00000349124 SNW1Q13573 536 aaKnown RBP21.26■□□□□ 0.99
PTP4A3-202ENST00000349124 GJB4Q9NTQ9 266 aa21.26■□□□□ 0.99
PTP4A3-202ENST00000349124 CWC25Q9NXE8 425 aaPredicted RBP21.26■□□□□ 0.99
PTP4A3-202ENST00000349124 TPM3P06753 285 aa21.26■□□□□ 0.99
PTP4A3-202ENST00000349124 IQCB1Q15051 598 aa21.26■□□□□ 0.99
PTP4A3-202ENST00000349124 PRDM10Q9NQV6 1147 aa21.26■□□□□ 0.99
PTP4A3-202ENST00000349124 CLIP2Q9UDT6 1046 aa21.26■□□□□ 0.99
PTP4A3-202ENST00000349124 ZNF330Q9Y3S2 320 aaPredicted RBP21.26■□□□□ 0.99
PTP4A3-202ENST00000349124 ADAMTS7Q9UKP4 1686 aa21.25■□□□□ 0.99
PTP4A3-202ENST00000349124 HELLSQ9NRZ9 838 aa21.25■□□□□ 0.99
PTP4A3-202ENST00000349124 FDPSP14324 419 aaKnown RBP21.25■□□□□ 0.99
PTP4A3-202ENST00000349124 ADORA1P30542 326 aa21.25■□□□□ 0.99
PTP4A3-202ENST00000349124 DSCC1Q9BVC3 393 aa21.25■□□□□ 0.99
PTP4A3-202ENST00000349124 TAOK2Q9UL54 1235 aa21.24■□□□□ 0.99
PTP4A3-202ENST00000349124 EYA2O00167 538 aa21.24■□□□□ 0.99
PTP4A3-202ENST00000349124 ATF3P18847 181 aa21.24■□□□□ 0.99
PTP4A3-202ENST00000349124 LLPHQ9BRT6 129 aaKnown RBP21.24■□□□□ 0.99
PTP4A3-202ENST00000349124 CAMTA1Q9Y6Y1 1673 aa21.24■□□□□ 0.99
PTP4A3-202ENST00000349124 RNF113AO15541 343 aaKnown RBP21.23■□□□□ 0.99
PTP4A3-202ENST00000349124 HMGB1P09429 215 aaKnown RBP21.23■□□□□ 0.99
PTP4A3-202ENST00000349124 IL15P40933 162 aaPredicted RBP21.23■□□□□ 0.99
PTP4A3-202ENST00000349124 ME1P48163 572 aa21.23■□□□□ 0.99
PTP4A3-202ENST00000349124 PI16Q6UXB8 463 aa21.23■□□□□ 0.99
PTP4A3-202ENST00000349124 SCARF1Q14162 830 aa21.23■□□□□ 0.99
PTP4A3-202ENST00000349124 NAA16Q6N069 864 aaPredicted RBP21.23■□□□□ 0.99
PTP4A3-202ENST00000349124 TRPM3Q9HCF6 1732 aaPredicted RBP21.23■□□□□ 0.99
PTP4A3-202ENST00000349124 MTERF4Q7Z6M4 381 aaKnown RBP21.22■□□□□ 0.99
PTP4A3-202ENST00000349124 AGXT2Q9BYV1 514 aa21.22■□□□□ 0.99
PTP4A3-202ENST00000349124 FOXP2O15409 715 aa21.22■□□□□ 0.99
PTP4A3-202ENST00000349124 POLR3DP05423 398 aaPredicted RBP21.21■□□□□ 0.99
PTP4A3-202ENST00000349124 FSIP1Q8NA03 581 aa21.21■□□□□ 0.99
PTP4A3-202ENST00000349124 PALLDQ8WX93 1383 aa21.21■□□□□ 0.99
PTP4A3-202ENST00000349124 SCN11AQ9UI33 1791 aa21.21■□□□□ 0.99
PTP4A3-202ENST00000349124 NAA30Q147X3 362 aaPredicted RBP21.21■□□□□ 0.99
PTP4A3-202ENST00000349124 WASHC4Q2M389 1173 aa21.21■□□□□ 0.99
PTP4A3-202ENST00000349124 ENGASEQ8NFI3 743 aa21.21■□□□□ 0.99
PTP4A3-202ENST00000349124 RFX7Q2KHR2 1363 aa21.21■□□□□ 0.99
PTP4A3-202ENST00000349124 A0A1B0GVL5 298 aa21.2■□□□□ 0.99
PTP4A3-202ENST00000349124 SYNE4Q8N205 404 aa21.2■□□□□ 0.99
PTP4A3-202ENST00000349124 CCDC94Q9BW85 323 aaPredicted RBP21.2■□□□□ 0.99
PTP4A3-202ENST00000349124 SALL1Q9NSC2 1324 aa21.2■□□□□ 0.98
PTP4A3-202ENST00000349124 GOLGA6L19H0YKK7 550 aa21.2■□□□□ 0.98
PTP4A3-202ENST00000349124 PPP4R3BQ5MIZ7 849 aa21.2■□□□□ 0.98
PTP4A3-202ENST00000349124 PCDHA7Q9UN72 937 aa21.2■□□□□ 0.98
PTP4A3-202ENST00000349124 CHAF1AQ13111 956 aaPredicted RBP21.2■□□□□ 0.98
PTP4A3-202ENST00000349124 ATP2B3Q16720 1220 aa21.2■□□□□ 0.98
PTP4A3-202ENST00000349124 DENND2AQ9ULE3 1009 aa21.2■□□□□ 0.98
PTP4A3-202ENST00000349124 CBX1P83916 185 aa21.19■□□□□ 0.98
PTP4A3-202ENST00000349124 CCDC73Q6ZRK6 1079 aa21.19■□□□□ 0.98
PTP4A3-202ENST00000349124 NKX2-3Q8TAU0 364 aa21.19■□□□□ 0.98
PTP4A3-202ENST00000349124 USP27XA6NNY8 438 aa21.19■□□□□ 0.98
PTP4A3-202ENST00000349124 FILIP1Q7Z7B0 1213 aa21.19■□□□□ 0.98
PTP4A3-202ENST00000349124 CEP126Q9P2H0 1117 aa21.19■□□□□ 0.98
PTP4A3-202ENST00000349124 CLIC4Q9Y696 253 aa21.19■□□□□ 0.98
PTP4A3-202ENST00000349124 FGAP02671 866 aa21.18■□□□□ 0.98
PTP4A3-202ENST00000349124 TNNT1P13805 278 aa21.18■□□□□ 0.98
PTP4A3-202ENST00000349124 DHX40Q8IX18 779 aaKnown RBP21.18■□□□□ 0.98
PTP4A3-202ENST00000349124 FAM89AQ96GI7 184 aa21.18■□□□□ 0.98
PTP4A3-202ENST00000349124 KINO60870 393 aaKnown RBP21.18■□□□□ 0.98
PTP4A3-202ENST00000349124 GORABQ5T7V8 394 aa21.18■□□□□ 0.98
PTP4A3-202ENST00000349124 PUS7LQ9H0K6 701 aaKnown RBP21.18■□□□□ 0.98
PTP4A3-202ENST00000349124 GPR108Q9NPR9 543 aa21.18■□□□□ 0.98
PTP4A3-202ENST00000349124 CARMIL3Q8ND23 1372 aa21.17■□□□□ 0.98
PTP4A3-202ENST00000349124 SPDYE4A6NLX3 237 aa21.17■□□□□ 0.98
PTP4A3-202ENST00000349124 ZNF274Q96GC6 653 aaPredicted RBP21.17■□□□□ 0.98
PTP4A3-202ENST00000349124 XAGE2Q96GT9 111 aa21.17■□□□□ 0.98
PTP4A3-202ENST00000349124 LMTK3Q96Q04 1460 aa21.17■□□□□ 0.98
PTP4A3-202ENST00000349124 BECN2A8MW95 431 aa21.17■□□□□ 0.98
PTP4A3-202ENST00000349124 ZAP70P43403 619 aa21.17■□□□□ 0.98
PTP4A3-202ENST00000349124 FAM160A1Q05DH4 1040 aa21.17■□□□□ 0.98
PTP4A3-202ENST00000349124 STX1AQ16623 288 aa21.17■□□□□ 0.98
PTP4A3-202ENST00000349124 ZCRB1Q8TBF4 217 aaKnown RBP21.17■□□□□ 0.98
PTP4A3-202ENST00000349124 PKNOX2Q96KN3 472 aa21.17■□□□□ 0.98
PTP4A3-202ENST00000349124 TMEM94Q12767 1356 aa21.16■□□□□ 0.98
PTP4A3-202ENST00000349124 NDUFA8P51970 172 aa21.16■□□□□ 0.98
PTP4A3-202ENST00000349124 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.16■□□□□ 0.98
PTP4A3-202ENST00000349124 LRRC8AQ8IWT6 810 aa21.16■□□□□ 0.98
PTP4A3-202ENST00000349124 CCDC191Q8NCU4 936 aa21.16■□□□□ 0.98
PTP4A3-202ENST00000349124 ZNF592Q92610 1267 aa21.16■□□□□ 0.98
PTP4A3-202ENST00000349124 ZNF396Q96N95 335 aaPredicted RBP21.16■□□□□ 0.98
PTP4A3-202ENST00000349124 TPD52L1Q16890 204 aaPredicted RBP21.16■□□□□ 0.98
PTP4A3-202ENST00000349124 TOM1L2Q6ZVM7 507 aa21.16■□□□□ 0.98
PTP4A3-202ENST00000349124 AOPEPQ8N6M6 819 aa21.16■□□□□ 0.98
PTP4A3-202ENST00000349124 AFDNP55196 1824 aaKnown RBP21.16■□□□□ 0.98
PTP4A3-202ENST00000349124 TTC39AQ5SRH9 613 aa21.15■□□□□ 0.98
PTP4A3-202ENST00000349124 SDF4Q9BRK5 362 aa21.15■□□□□ 0.98
PTP4A3-202ENST00000349124 CCDC57Q2TAC2 916 aa21.15■□□□□ 0.98
PTP4A3-202ENST00000349124 KLF18A0A0U1RQI7 1052 aa21.14■□□□□ 0.98
PTP4A3-202ENST00000349124 PRC1O43663 620 aa21.14■□□□□ 0.98
PTP4A3-202ENST00000349124 FMR1NBQ8N0W7 255 aaPredicted RBP21.14■□□□□ 0.98
PTP4A3-202ENST00000349124 HPS5Q9UPZ3 1129 aa21.14■□□□□ 0.98
PTP4A3-202ENST00000349124 BIN1O00499 593 aa21.14■□□□□ 0.97
PTP4A3-202ENST00000349124 TRMT1Q9NXH9 659 aaKnown RBP21.14■□□□□ 0.97
PTP4A3-202ENST00000349124 ARFGEF2Q9Y6D5 1785 aa21.14■□□□□ 0.97
PTP4A3-202ENST00000349124 CTIFO43310 598 aaKnown RBP21.13■□□□□ 0.97
PTP4A3-202ENST00000349124 ANTXR2P58335 489 aa21.13■□□□□ 0.97
PTP4A3-202ENST00000349124 PDCL2Q8N4E4 241 aa21.13■□□□□ 0.97
PTP4A3-202ENST00000349124 AIFM3Q96NN9 605 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms