RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 CCDC102BQ68D86 513 aa26.96■■□□□ 1.91
TNFRSF10B-202ENST00000347739 NBPF5PQ86XG9 351 aaPredicted RBP26.96■■□□□ 1.91
TNFRSF10B-202ENST00000347739 PSMA5P28066 241 aa26.96■■□□□ 1.91
TNFRSF10B-202ENST00000347739 RBM6P78332 1123 aaKnown RBP26.96■■□□□ 1.91
TNFRSF10B-202ENST00000347739 TTF1Q15361 905 aaPredicted RBP26.96■■□□□ 1.91
TNFRSF10B-202ENST00000347739 VPS53Q5VIR6 699 aa26.96■■□□□ 1.91
TNFRSF10B-202ENST00000347739 CCDC129Q6ZRS4 1044 aa26.96■■□□□ 1.91
TNFRSF10B-202ENST00000347739 C3orf67Q6ZVT6 689 aa26.96■■□□□ 1.91
TNFRSF10B-202ENST00000347739 HELBQ8NG08 1087 aaPredicted RBP26.96■■□□□ 1.91
TNFRSF10B-202ENST00000347739 DSCC1Q9BVC3 393 aa26.96■■□□□ 1.91
TNFRSF10B-202ENST00000347739 CYP46A1Q9Y6A2 500 aa26.96■■□□□ 1.91
TNFRSF10B-202ENST00000347739 TPTE2Q6XPS3 522 aa26.95■■□□□ 1.9
TNFRSF10B-202ENST00000347739 RUFY3Q7L099 469 aa26.95■■□□□ 1.9
TNFRSF10B-202ENST00000347739 ANKRD18AQ8IVF6 992 aa26.95■■□□□ 1.9
TNFRSF10B-202ENST00000347739 MAST3O60307 1309 aa26.94■■□□□ 1.9
TNFRSF10B-202ENST00000347739 HMGB2P26583 209 aaKnown RBP26.94■■□□□ 1.9
TNFRSF10B-202ENST00000347739 PHKA1P46020 1223 aa26.93■■□□□ 1.9
TNFRSF10B-202ENST00000347739 AK2P54819 239 aa26.93■■□□□ 1.9
TNFRSF10B-202ENST00000347739 NUCB2P80303 420 aa26.93■■□□□ 1.9
TNFRSF10B-202ENST00000347739 CHRNDQ07001 517 aa26.93■■□□□ 1.9
TNFRSF10B-202ENST00000347739 ZGPATQ8N5A5 531 aaKnown RBP26.93■■□□□ 1.9
TNFRSF10B-202ENST00000347739 BSDC1Q9NW68 430 aaPredicted RBP26.93■■□□□ 1.9
TNFRSF10B-202ENST00000347739 CARMIL3Q8ND23 1372 aa26.93■■□□□ 1.9
TNFRSF10B-202ENST00000347739 KRT32Q14532 448 aa26.93■■□□□ 1.9
TNFRSF10B-202ENST00000347739 PI16Q6UXB8 463 aa26.93■■□□□ 1.9
TNFRSF10B-202ENST00000347739 TNPO1Q92973 898 aaKnown RBP26.93■■□□□ 1.9
TNFRSF10B-202ENST00000347739 NLRP3Q96P20 1036 aa26.93■■□□□ 1.9
TNFRSF10B-202ENST00000347739 TRIM37O94972 964 aa26.92■■□□□ 1.9
TNFRSF10B-202ENST00000347739 MCM4P33991 863 aa26.92■■□□□ 1.9
TNFRSF10B-202ENST00000347739 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.92■■□□□ 1.91e-6■■■□□ 15.9
TNFRSF10B-202ENST00000347739 PDRG1Q9NUG6 133 aa26.92■■□□□ 1.9
TNFRSF10B-202ENST00000347739 LIMCH1Q9UPQ0 1083 aa26.92■■□□□ 1.9
TNFRSF10B-202ENST00000347739 EP400Q96L91 3159 aa26.92■■□□□ 1.9
TNFRSF10B-202ENST00000347739 PHF14O94880 888 aa26.91■■□□□ 1.9
TNFRSF10B-202ENST00000347739 ZSCAN25Q6NSZ9 544 aa26.91■■□□□ 1.9
TNFRSF10B-202ENST00000347739 DOCK2Q92608 1830 aa26.91■■□□□ 1.9
TNFRSF10B-202ENST00000347739 CYP2E1P05181 493 aaPredicted RBP26.9■■□□□ 1.9
TNFRSF10B-202ENST00000347739 SLFNL1Q499Z3 407 aa26.9■■□□□ 1.9
TNFRSF10B-202ENST00000347739 APPBP2Q92624 585 aa26.9■■□□□ 1.9
TNFRSF10B-202ENST00000347739 OSBP2Q969R2 916 aa26.9■■□□□ 1.9
TNFRSF10B-202ENST00000347739 ALDH8A1Q9H2A2 487 aaPredicted RBP26.9■■□□□ 1.9
TNFRSF10B-202ENST00000347739 CLEC17AQ6ZS10 378 aa26.9■■□□□ 1.9
TNFRSF10B-202ENST00000347739 TAF1P21675 1872 aa26.89■■□□□ 1.9
TNFRSF10B-202ENST00000347739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.89■■□□□ 1.9
TNFRSF10B-202ENST00000347739 NOL8Q76FK4 1167 aaKnown RBP26.89■■□□□ 1.9
TNFRSF10B-202ENST00000347739 M0R2C6 588 aa26.88■■□□□ 1.89
TNFRSF10B-202ENST00000347739 HSPD1P10809 573 aaKnown RBP26.88■■□□□ 1.89
TNFRSF10B-202ENST00000347739 CPA1P15085 419 aa26.88■■□□□ 1.89
TNFRSF10B-202ENST00000347739 TNRC6CQ9HCJ0 1690 aaKnown RBP26.88■■□□□ 1.89
TNFRSF10B-202ENST00000347739 BLOC1S2Q6QNY1 142 aa26.87■■□□□ 1.89
TNFRSF10B-202ENST00000347739 GBP4Q96PP9 640 aa26.87■■□□□ 1.89
TNFRSF10B-202ENST00000347739 CYP21A2P08686 494 aa26.87■■□□□ 1.89
TNFRSF10B-202ENST00000347739 ADD2P35612 726 aa26.87■■□□□ 1.89
TNFRSF10B-202ENST00000347739 UBE4AQ14139 1066 aa26.87■■□□□ 1.89
TNFRSF10B-202ENST00000347739 NFIXQ14938 502 aa26.87■■□□□ 1.89
TNFRSF10B-202ENST00000347739 SPATA5Q8NB90 893 aa26.87■■□□□ 1.89
TNFRSF10B-202ENST00000347739 ZSCAN31Q96LW9 406 aaPredicted RBP26.87■■□□□ 1.89
TNFRSF10B-202ENST00000347739 TAF6LQ9Y6J9 622 aa26.87■■□□□ 1.89
TNFRSF10B-202ENST00000347739 SNAP23O00161 211 aa26.86■■□□□ 1.89
TNFRSF10B-202ENST00000347739 RPS6KB1P23443 525 aa26.86■■□□□ 1.89
TNFRSF10B-202ENST00000347739 PIH1D3Q9NQM4 214 aaKnown RBP26.86■■□□□ 1.89
TNFRSF10B-202ENST00000347739 MYO5AQ9Y4I1 1855 aaKnown RBP26.86■■□□□ 1.89
TNFRSF10B-202ENST00000347739 DDX11L8A8MPP1 907 aa26.85■■□□□ 1.89
TNFRSF10B-202ENST00000347739 UBE3CQ15386 1083 aa26.85■■□□□ 1.89
TNFRSF10B-202ENST00000347739 WASHC4Q2M389 1173 aa26.85■■□□□ 1.89
TNFRSF10B-202ENST00000347739 CELF1Q92879 486 aaKnown RBP26.85■■□□□ 1.89
TNFRSF10B-202ENST00000347739 SH2B1Q9NRF2 756 aaPredicted RBP26.85■■□□□ 1.89
TNFRSF10B-202ENST00000347739 MINPP1Q9UNW1 487 aa26.85■■□□□ 1.89
TNFRSF10B-202ENST00000347739 RASGRF1Q13972 1273 aa26.85■■□□□ 1.89
TNFRSF10B-202ENST00000347739 ANKRD1Q15327 319 aa26.85■■□□□ 1.89
TNFRSF10B-202ENST00000347739 ZNF804BA4D1E1 1349 aa26.84■■□□□ 1.89
TNFRSF10B-202ENST00000347739 RPS8P62241 208 aaKnown RBP26.84■■□□□ 1.89
TNFRSF10B-202ENST00000347739 TXNRD1Q16881 649 aa26.83■■□□□ 1.89
TNFRSF10B-202ENST00000347739 NEK1Q96PY6 1258 aa26.83■■□□□ 1.89
TNFRSF10B-202ENST00000347739 GYS1P13807 737 aa26.82■■□□□ 1.88
TNFRSF10B-202ENST00000347739 TM4SF1P30408 202 aa26.82■■□□□ 1.88
TNFRSF10B-202ENST00000347739 SLC9C2Q5TAH2 1124 aa26.82■■□□□ 1.88
TNFRSF10B-202ENST00000347739 PUS7LQ9H0K6 701 aaKnown RBP26.82■■□□□ 1.88
TNFRSF10B-202ENST00000347739 PLSCR1O15162 318 aa26.82■■□□□ 1.88
TNFRSF10B-202ENST00000347739 BCAMP50895 628 aa26.82■■□□□ 1.88
TNFRSF10B-202ENST00000347739 PROM2Q8N271 834 aa26.82■■□□□ 1.88
TNFRSF10B-202ENST00000347739 CNBD1Q8NA66 436 aa26.82■■□□□ 1.88
TNFRSF10B-202ENST00000347739 LAMA4Q16363 1823 aa26.81■■□□□ 1.88
TNFRSF10B-202ENST00000347739 HMGB1P09429 215 aaKnown RBP26.81■■□□□ 1.88
TNFRSF10B-202ENST00000347739 CTNNA3Q9UI47 895 aa26.81■■□□□ 1.88
TNFRSF10B-202ENST00000347739 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.81■■□□□ 1.88
TNFRSF10B-202ENST00000347739 NPHP1O15259 732 aa26.8■■□□□ 1.88
TNFRSF10B-202ENST00000347739 FOXP2O15409 715 aa26.8■■□□□ 1.88
TNFRSF10B-202ENST00000347739 IDH1O75874 414 aaKnown RBP26.8■■□□□ 1.88
TNFRSF10B-202ENST00000347739 PKP1Q13835 747 aa26.8■■□□□ 1.88
TNFRSF10B-202ENST00000347739 TCRBV5S4A2TA0A5A2 114 aa26.79■■□□□ 1.88
TNFRSF10B-202ENST00000347739 GPAA1O43292 621 aa26.79■■□□□ 1.88
TNFRSF10B-202ENST00000347739 PDE6AP16499 860 aa26.79■■□□□ 1.88
TNFRSF10B-202ENST00000347739 ANKRD2Q9GZV1 360 aa26.79■■□□□ 1.88
TNFRSF10B-202ENST00000347739 PTMSP20962 102 aa26.79■■□□□ 1.88
TNFRSF10B-202ENST00000347739 MAP3K12Q12852 859 aa26.79■■□□□ 1.88
TNFRSF10B-202ENST00000347739 COL9A3Q14050 684 aaPredicted RBP26.79■■□□□ 1.88
TNFRSF10B-202ENST00000347739 ZDHHC9Q9Y397 364 aa26.79■■□□□ 1.88
TNFRSF10B-202ENST00000347739 LARGE1O95461 756 aa26.78■■□□□ 1.88
TNFRSF10B-202ENST00000347739 CCDC24Q8N4L8 307 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms